RNA–Protein interactions for RNA: ENST00000628324.2

LINC01170-202, Transcript of long intergenic non-protein coding RNA 1170, humanhuman

TSL 2 BASIC

Gene LINC01170, Length 650 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01170-202ENST00000628324 MYOM3Q5VTT5 1437 aa13.16□□□□□ -0.3
LINC01170-202ENST00000628324 FGD6Q6ZV73 1430 aa13.16□□□□□ -0.3
LINC01170-202ENST00000628324 UPF1Q92900 1129 aaKnown RBP eCLIP13.16□□□□□ -0.3
LINC01170-202ENST00000628324 SLAIN2Q9P270 581 aa13.16□□□□□ -0.3
LINC01170-202ENST00000628324 COL16A1Q07092 1604 aaPredicted RBP13.16□□□□□ -0.3
LINC01170-202ENST00000628324 SETD1AO15047 1707 aaKnown RBP13.15□□□□□ -0.3
LINC01170-202ENST00000628324 LRP6O75581 1613 aa13.13□□□□□ -0.31
LINC01170-202ENST00000628324 PROSER2Q86WR7 435 aaPredicted RBP13.13□□□□□ -0.31
LINC01170-202ENST00000628324 CHD2O14647 1828 aaKnown RBP13.13□□□□□ -0.31
LINC01170-202ENST00000628324 ZFYVE9O95405 1425 aa13.13□□□□□ -0.31
LINC01170-202ENST00000628324 SPATA31A6Q5VVP1 1343 aa13.13□□□□□ -0.31
LINC01170-202ENST00000628324 CDK12Q9NYV4 1490 aaPredicted RBP13.12□□□□□ -0.31
LINC01170-202ENST00000628324 KIF15Q9NS87 1388 aa13.12□□□□□ -0.31
LINC01170-202ENST00000628324 PHLPP1O60346 1717 aa13.12□□□□□ -0.31
LINC01170-202ENST00000628324 ABCC5O15440 1437 aa13.12□□□□□ -0.31
LINC01170-202ENST00000628324 MYT1Q01538 1121 aa13.11□□□□□ -0.31
LINC01170-202ENST00000628324 SLC26A8Q96RN1 970 aa13.11□□□□□ -0.31
LINC01170-202ENST00000628324 AHDC1Q5TGY3 1603 aaPredicted RBP13.1□□□□□ -0.31
LINC01170-202ENST00000628324 MSH6P52701 1360 aa13.1□□□□□ -0.31
LINC01170-202ENST00000628324 ADGRB3O60242 1522 aa13.1□□□□□ -0.31
LINC01170-202ENST00000628324 SLC52A1Q9NWF4 448 aa13.1□□□□□ -0.31
LINC01170-202ENST00000628324 CROCC2H7BZ55 1655 aa13.08□□□□□ -0.31
LINC01170-202ENST00000628324 SHPRHQ149N8 1683 aa13.08□□□□□ -0.31
LINC01170-202ENST00000628324 PLEKHG1Q9ULL1 1385 aa13.08□□□□□ -0.31
LINC01170-202ENST00000628324 HOXD11P31277 338 aaPredicted RBP13.08□□□□□ -0.32
LINC01170-202ENST00000628324 KANK4Q5T7N3 995 aaPredicted RBP13.08□□□□□ -0.32
LINC01170-202ENST00000628324 ZNF772Q68DY9 489 aaPredicted RBP13.08□□□□□ -0.32
LINC01170-202ENST00000628324 RBM33Q96EV2 1170 aaKnown RBP13.08□□□□□ -0.32
LINC01170-202ENST00000628324 TBX22Q9Y458 520 aa13.08□□□□□ -0.32
LINC01170-202ENST00000628324 DIP2AQ14689 1571 aa13.07□□□□□ -0.32
LINC01170-202ENST00000628324 RPRD2Q5VT52 1461 aaKnown RBP13.07□□□□□ -0.32
LINC01170-202ENST00000628324 ACIN1Q9UKV3 1341 aaKnown RBP13.07□□□□□ -0.32
LINC01170-202ENST00000628324 VPS8Q8N3P4 1428 aa13.06□□□□□ -0.32
LINC01170-202ENST00000628324 PIK3R4Q99570 1358 aa13.05□□□□□ -0.32
LINC01170-202ENST00000628324 RRP7BPQ9NSQ0 103 aa13.04□□□□□ -0.32
LINC01170-202ENST00000628324 KANK1Q14678 1352 aa13.04□□□□□ -0.32
LINC01170-202ENST00000628324 DAPK1P53355 1430 aa13.04□□□□□ -0.32
LINC01170-202ENST00000628324 ADAMTS13Q76LX8 1427 aa13.04□□□□□ -0.32
LINC01170-202ENST00000628324 TMEM131LA2VDJ0 1609 aa13.03□□□□□ -0.32
LINC01170-202ENST00000628324 ZBTB22O15209 634 aa13.03□□□□□ -0.32
LINC01170-202ENST00000628324 C19orf44Q9H6X5 657 aa13.03□□□□□ -0.32
LINC01170-202ENST00000628324 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.02□□□□□ -0.32
LINC01170-202ENST00000628324 CENPBP07199 599 aaPredicted RBP13.02□□□□□ -0.33
LINC01170-202ENST00000628324 STAG3Q9UJ98 1225 aa13.02□□□□□ -0.33
LINC01170-202ENST00000628324 SETD5Q9C0A6 1442 aa13.02□□□□□ -0.33
LINC01170-202ENST00000628324 RXRBP28702 533 aa13.01□□□□□ -0.33
LINC01170-202ENST00000628324 CADPS2Q86UW7 1296 aa13.01□□□□□ -0.33
LINC01170-202ENST00000628324 DCCP43146 1447 aa13.01□□□□□ -0.33
LINC01170-202ENST00000628324 ADGRL2O95490 1459 aa13.01□□□□□ -0.33
LINC01170-202ENST00000628324 EP400Q96L91 3159 aa13.01□□□□□ -0.33
LINC01170-202ENST00000628324 RIMS2Q9UQ26 1411 aa13□□□□□ -0.33
LINC01170-202ENST00000628324 PTPN23Q9H3S7 1636 aa12.99□□□□□ -0.33
LINC01170-202ENST00000628324 BRINP3Q76B58 766 aa12.99□□□□□ -0.33
LINC01170-202ENST00000628324 CCER1Q8TC90 406 aaPredicted RBP12.99□□□□□ -0.33
LINC01170-202ENST00000628324 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.99□□□□□ -0.33
LINC01170-202ENST00000628324 FOXD4L1Q9NU39 408 aa12.99□□□□□ -0.33
LINC01170-202ENST00000628324 MYO5BQ9ULV0 1848 aa12.99□□□□□ -0.33
LINC01170-202ENST00000628324 ANKRD30AQ9BXX3 1397 aa12.98□□□□□ -0.33
LINC01170-202ENST00000628324 HDGFP51858 240 aaKnown RBP12.98□□□□□ -0.33
LINC01170-202ENST00000628324 PTPRUQ92729 1446 aa12.96□□□□□ -0.33
LINC01170-202ENST00000628324 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.96□□□□□ -0.33
LINC01170-202ENST00000628324 TRIM52Q96A61 297 aa12.96□□□□□ -0.33
LINC01170-202ENST00000628324 NHSL1Q5SYE7 1610 aa12.95□□□□□ -0.34
LINC01170-202ENST00000628324 GCC2Q8IWJ2 1684 aa12.95□□□□□ -0.34
LINC01170-202ENST00000628324 RGS12O14924 1447 aa12.95□□□□□ -0.34
LINC01170-202ENST00000628324 DIEXFQ68CQ4 756 aaKnown RBP12.94□□□□□ -0.34
LINC01170-202ENST00000628324 LAMC1P11047 1609 aa12.94□□□□□ -0.34
LINC01170-202ENST00000628324 MST1RQ04912 1400 aa12.94□□□□□ -0.34
LINC01170-202ENST00000628324 ASXL1Q8IXJ9 1541 aa12.93□□□□□ -0.34
LINC01170-202ENST00000628324 AFF2P51816 1311 aa12.93□□□□□ -0.34
LINC01170-202ENST00000628324 XRN1Q8IZH2 1706 aaKnown RBP12.93□□□□□ -0.34
LINC01170-202ENST00000628324 ATF3P18847 181 aa12.92□□□□□ -0.34
LINC01170-202ENST00000628324 RBM6P78332 1123 aaKnown RBP12.92□□□□□ -0.34
LINC01170-202ENST00000628324 UNC13BO14795 1591 aa12.91□□□□□ -0.34
LINC01170-202ENST00000628324 ANKRD50Q9ULJ7 1429 aa12.91□□□□□ -0.34
LINC01170-202ENST00000628324 MEX3CQ5U5Q3 659 aaKnown RBP12.91□□□□□ -0.34
LINC01170-202ENST00000628324 LRRC59Q96AG4 307 aaKnown RBP12.91□□□□□ -0.34
LINC01170-202ENST00000628324 AMOTL2Q9Y2J4 779 aa12.91□□□□□ -0.34
LINC01170-202ENST00000628324 TRPM2O94759 1503 aa12.91□□□□□ -0.34
LINC01170-202ENST00000628324 PNPLA6Q8IY17 1366 aa12.91□□□□□ -0.34
LINC01170-202ENST00000628324 NRXN3Q9Y4C0 1643 aa12.91□□□□□ -0.34
LINC01170-202ENST00000628324 QTRT2Q9H974 415 aaKnown RBP12.9□□□□□ -0.34
LINC01170-202ENST00000628324 SETBP1Q9Y6X0 1596 aa12.9□□□□□ -0.35
LINC01170-202ENST00000628324 NEUROD1Q13562 356 aa12.88□□□□□ -0.35
LINC01170-202ENST00000628324 CHIC2Q9UKJ5 165 aa12.88□□□□□ -0.35
LINC01170-202ENST00000628324 E9PCH4 1651 aa12.88□□□□□ -0.35
LINC01170-202ENST00000628324 CLSPNQ9HAW4 1339 aa12.88□□□□□ -0.35
LINC01170-202ENST00000628324 ZNF316A6NFI3 1004 aaPredicted RBP12.87□□□□□ -0.35
LINC01170-202ENST00000628324 PPP1R15AO75807 674 aaPredicted RBP12.87□□□□□ -0.35
LINC01170-202ENST00000628324 FNBP4Q8N3X1 1017 aaPredicted RBP12.87□□□□□ -0.35
LINC01170-202ENST00000628324 BCANQ96GW7 911 aa12.87□□□□□ -0.35
LINC01170-202ENST00000628324 PRAG1Q86YV5 1406 aa12.86□□□□□ -0.35
LINC01170-202ENST00000628324 ADGRL3Q9HAR2 1447 aa12.85□□□□□ -0.35
LINC01170-202ENST00000628324 SOS2Q07890 1332 aaPredicted RBP12.85□□□□□ -0.35
LINC01170-202ENST00000628324 IQGAP3Q86VI3 1631 aa12.84□□□□□ -0.35
LINC01170-202ENST00000628324 METP08581 1390 aa12.84□□□□□ -0.35
LINC01170-202ENST00000628324 NUTM2BA6NNL0 878 aaPredicted RBP12.84□□□□□ -0.35
LINC01170-202ENST00000628324 NUTM2EB1AL46 878 aaPredicted RBP12.84□□□□□ -0.35
LINC01170-202ENST00000628324 C14orf37Q86TY3 774 aa12.84□□□□□ -0.35
LINC01170-202ENST00000628324 NUTM2AQ8IVF1 878 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms