RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 MYO5BQ9ULV0 1848 aa24.28■■□□□ 1.48
PCF11-207ENST00000624931 IDI1Q13907 227 aa24.27■■□□□ 1.48
PCF11-207ENST00000624931 PPLO60437 1756 aa24.25■■□□□ 1.47
PCF11-207ENST00000624931 EIF4G2P78344 907 aaKnown RBP eCLIP24.24■■□□□ 1.47
PCF11-207ENST00000624931 TMEM131LA2VDJ0 1609 aa24.24■■□□□ 1.47
PCF11-207ENST00000624931 NBPF1Q3BBV0 1214 aa24.23■■□□□ 1.47
PCF11-207ENST00000624931 ROCK2O75116 1388 aaKnown RBP24.23■■□□□ 1.47
PCF11-207ENST00000624931 MYOM2P54296 1465 aa24.23■■□□□ 1.47
PCF11-207ENST00000624931 ERICH6BQ5W0A0 696 aa24.22■■□□□ 1.47
PCF11-207ENST00000624931 USP47Q96K76 1375 aa24.21■■□□□ 1.47
PCF11-207ENST00000624931 BCANQ96GW7 911 aa24.21■■□□□ 1.47
PCF11-207ENST00000624931 SLC52A1Q9NWF4 448 aa24.21■■□□□ 1.47
PCF11-207ENST00000624931 ADGRF5Q8IZF2 1346 aa24.21■■□□□ 1.47
PCF11-207ENST00000624931 C3P01024 1663 aa24.2■■□□□ 1.47
PCF11-207ENST00000624931 NEXMIFQ5QGS0 1516 aa24.2■■□□□ 1.46
PCF11-207ENST00000624931 CARD11Q9BXL7 1154 aa24.2■■□□□ 1.46
PCF11-207ENST00000624931 CEBPAP49715 358 aaPredicted RBP24.19■■□□□ 1.46
PCF11-207ENST00000624931 PLPPR3Q6T4P5 718 aa24.18■■□□□ 1.46
PCF11-207ENST00000624931 NUTM2DQ5VT03 806 aaPredicted RBP24.17■■□□□ 1.46
PCF11-207ENST00000624931 NRXN1Q9ULB1 1477 aa24.16■■□□□ 1.46
PCF11-207ENST00000624931 RIMS1Q86UR5 1692 aaKnown RBP24.15■■□□□ 1.46
PCF11-207ENST00000624931 GPRASP1Q5JY77 1395 aa24.15■■□□□ 1.46
PCF11-207ENST00000624931 TNRQ92752 1358 aa24.15■■□□□ 1.46
PCF11-207ENST00000624931 LAMC1P11047 1609 aa24.15■■□□□ 1.46
PCF11-207ENST00000624931 RBM19Q9Y4C8 960 aaKnown RBP24.14■■□□□ 1.45
PCF11-207ENST00000624931 KIAA1210Q9ULL0 1709 aa24.11■■□□□ 1.45
PCF11-207ENST00000624931 A2ML1A8K2U0 1454 aa24.11■■□□□ 1.45
PCF11-207ENST00000624931 RPGRIP1LQ68CZ1 1315 aa24.11■■□□□ 1.45
PCF11-207ENST00000624931 STAC3Q96MF2 364 aa24.1■■□□□ 1.45
PCF11-207ENST00000624931 ADAMTSL3P82987 1691 aa24.1■■□□□ 1.45
PCF11-207ENST00000624931 PIK3C2GO75747 1445 aa24.1■■□□□ 1.45
PCF11-207ENST00000624931 C11orf95C9JLR9 678 aaPredicted RBP24.1■■□□□ 1.45
PCF11-207ENST00000624931 CFAP70Q5T0N1 1121 aa24.1■■□□□ 1.45
PCF11-207ENST00000624931 SENP3Q9H4L4 574 aaPredicted RBP24.1■■□□□ 1.45
PCF11-207ENST00000624931 STAG3Q9UJ98 1225 aa24.1■■□□□ 1.45
PCF11-207ENST00000624931 IQGAP1P46940 1657 aa24.08■■□□□ 1.45
PCF11-207ENST00000624931 WASHC2AQ641Q2 1341 aa24.07■■□□□ 1.44
PCF11-207ENST00000624931 ST20-MTHFSA0A0A6YYL1 179 aa24.05■■□□□ 1.44
PCF11-207ENST00000624931 UBR1Q8IWV7 1749 aa24.05■■□□□ 1.44
PCF11-207ENST00000624931 POLR1AO95602 1720 aaPredicted RBP24.03■■□□□ 1.44
PCF11-207ENST00000624931 RIMS2Q9UQ26 1411 aa24.02■■□□□ 1.44
PCF11-207ENST00000624931 CCDC7Q96M83 1385 aa24.02■■□□□ 1.44
PCF11-207ENST00000624931 HNRNPUQ00839 825 aaKnown RBP eCLIP24.01■■□□□ 1.43
PCF11-207ENST00000624931 ZFYVE9O95405 1425 aa24.01■■□□□ 1.43
PCF11-207ENST00000624931 MYO3AQ8NEV4 1616 aa24■■□□□ 1.43
PCF11-207ENST00000624931 VGFO15240 615 aaPredicted RBP24■■□□□ 1.43
PCF11-207ENST00000624931 SCAF11Q99590 1463 aaKnown RBP24■■□□□ 1.43
PCF11-207ENST00000624931 KIF7Q2M1P5 1343 aa24■■□□□ 1.43
PCF11-207ENST00000624931 ADGRB1O14514 1584 aa23.99■■□□□ 1.43
PCF11-207ENST00000624931 NLRP1Q9C000 1473 aa23.99■■□□□ 1.43
PCF11-207ENST00000624931 FANCIQ9NVI1 1328 aa23.99■■□□□ 1.43
PCF11-207ENST00000624931 SETBP1Q9Y6X0 1596 aa23.98■■□□□ 1.43
PCF11-207ENST00000624931 KDM5AP29375 1690 aaKnown RBP23.98■■□□□ 1.43
PCF11-207ENST00000624931 C14orf93Q9H972 538 aaKnown RBP23.98■■□□□ 1.43
PCF11-207ENST00000624931 ASXL1Q8IXJ9 1541 aa23.96■■□□□ 1.43
PCF11-207ENST00000624931 TMEM132EQ6IEE7 984 aa23.96■■□□□ 1.43
PCF11-207ENST00000624931 POLR3GLQ9BT43 218 aa23.93■■□□□ 1.42
PCF11-207ENST00000624931 TESK2Q96S53 571 aa23.92■■□□□ 1.42
PCF11-207ENST00000624931 TMEM2Q9UHN6 1383 aa23.91■■□□□ 1.42
PCF11-207ENST00000624931 PPP4R2Q9NY27 417 aa23.91■■□□□ 1.42
PCF11-207ENST00000624931 ALKQ9UM73 1620 aa23.9■■□□□ 1.42
PCF11-207ENST00000624931 NRXN3Q9Y4C0 1643 aa23.9■■□□□ 1.42
PCF11-207ENST00000624931 DISP3Q9P2K9 1392 aa23.9■■□□□ 1.42
PCF11-207ENST00000624931 PTPRMP28827 1452 aa23.9■■□□□ 1.42
PCF11-207ENST00000624931 CEP170BQ9Y4F5 1589 aaPredicted RBP23.89■■□□□ 1.41
PCF11-207ENST00000624931 SETD1AO15047 1707 aaKnown RBP23.88■■□□□ 1.41
PCF11-207ENST00000624931 TRAK1Q9UPV9 953 aa23.87■■□□□ 1.41
PCF11-207ENST00000624931 EIF3AQ14152 1382 aaKnown RBP23.86■■□□□ 1.41
PCF11-207ENST00000624931 ARHGEF28Q8N1W1 1705 aaKnown RBP23.85■■□□□ 1.41
PCF11-207ENST00000624931 ZBED9Q6R2W3 1325 aa23.85■■□□□ 1.41
PCF11-207ENST00000624931 PRKRIP1Q9H875 184 aaPredicted RBP23.84■■□□□ 1.41
PCF11-207ENST00000624931 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.84■■□□□ 1.41
PCF11-207ENST00000624931 ARHGAP23Q9P227 1491 aa23.83■■□□□ 1.41
PCF11-207ENST00000624931 LTKP29376 864 aa23.83■■□□□ 1.41
PCF11-207ENST00000624931 SLIT1O75093 1534 aa23.83■■□□□ 1.41
PCF11-207ENST00000624931 ZNF142P52746 1687 aaPredicted RBP23.83■■□□□ 1.4
PCF11-207ENST00000624931 QRICH2Q9H0J4 1663 aa23.83■■□□□ 1.4
PCF11-207ENST00000624931 STK26Q9P289 416 aa23.81■■□□□ 1.4
PCF11-207ENST00000624931 YTHDC2Q9H6S0 1430 aaKnown RBP23.79■■□□□ 1.4
PCF11-207ENST00000624931 TMF1P82094 1093 aa23.79■■□□□ 1.4
PCF11-207ENST00000624931 CENPJQ9HC77 1338 aaPredicted RBP23.78■■□□□ 1.4
PCF11-207ENST00000624931 TXNDC2Q86VQ3 553 aa23.78■■□□□ 1.4
PCF11-207ENST00000624931 HDGFP51858 240 aaKnown RBP23.76■■□□□ 1.39
PCF11-207ENST00000624931 THEMISQ8N1K5 641 aaPredicted RBP23.76■■□□□ 1.39
PCF11-207ENST00000624931 METP08581 1390 aa23.76■■□□□ 1.39
PCF11-207ENST00000624931 PLEKHG1Q9ULL1 1385 aa23.76■■□□□ 1.39
PCF11-207ENST00000624931 ADAMTS13Q76LX8 1427 aa23.75■■□□□ 1.39
PCF11-207ENST00000624931 MRS2Q9HD23 443 aa23.74■■□□□ 1.39
PCF11-207ENST00000624931 ERICH6Q7L0X2 663 aa23.73■■□□□ 1.39
PCF11-207ENST00000624931 SAFB2Q14151 953 aaKnown RBP eCLIP23.73■■□□□ 1.39
PCF11-207ENST00000624931 EID1Q9Y6B2 187 aa23.73■■□□□ 1.39
PCF11-207ENST00000624931 SETD1BQ9UPS6 1966 aaKnown RBP23.72■■□□□ 1.39
PCF11-207ENST00000624931 MYOM1P52179 1685 aa23.7■■□□□ 1.39
PCF11-207ENST00000624931 LRPPRCP42704 1394 aaKnown RBP23.7■■□□□ 1.38
PCF11-207ENST00000624931 SBNO2Q9Y2G9 1366 aa23.7■■□□□ 1.38
PCF11-207ENST00000624931 MSH5O43196 834 aa23.7■■□□□ 1.38
PCF11-207ENST00000624931 PRAM1Q96QH2 718 aa23.68■■□□□ 1.38
PCF11-207ENST00000624931 SLC26A8Q96RN1 970 aa23.68■■□□□ 1.38
PCF11-207ENST00000624931 TULP4Q9NRJ4 1543 aa23.68■■□□□ 1.38
PCF11-207ENST00000624931 MED14O60244 1454 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms