RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 ZBED9Q6R2W3 1325 aa26.87■■□□□ 1.89
PCDHB11-202ENST00000624887 MROH2AA6NES4 1674 aa26.87■■□□□ 1.89
PCDHB11-202ENST00000624887 NEFLP07196 543 aa26.86■■□□□ 1.89
PCDHB11-202ENST00000624887 ADGRB3O60242 1522 aa26.85■■□□□ 1.89
PCDHB11-202ENST00000624887 PER1O15534 1290 aaPredicted RBP26.85■■□□□ 1.89
PCDHB11-202ENST00000624887 MYBBP1AQ9BQG0 1328 aaKnown RBP26.84■■□□□ 1.89
PCDHB11-202ENST00000624887 WASHC2CQ9Y4E1 1318 aa26.83■■□□□ 1.89
PCDHB11-202ENST00000624887 BRD4O60885 1362 aaPredicted RBP26.82■■□□□ 1.88
PCDHB11-202ENST00000624887 CAMSAP1Q5T5Y3 1602 aa26.82■■□□□ 1.88
PCDHB11-202ENST00000624887 NRXN1Q9ULB1 1477 aa26.81■■□□□ 1.88
PCDHB11-202ENST00000624887 PARD3Q8TEW0 1356 aa26.81■■□□□ 1.88
PCDHB11-202ENST00000624887 TMC1Q8TDI8 760 aa26.8■■□□□ 1.88
PCDHB11-202ENST00000624887 PNISRQ8TF01 805 aaKnown RBP26.8■■□□□ 1.88
PCDHB11-202ENST00000624887 EIF3AQ14152 1382 aaKnown RBP26.79■■□□□ 1.88
PCDHB11-202ENST00000624887 ADGRF5Q8IZF2 1346 aa26.79■■□□□ 1.88
PCDHB11-202ENST00000624887 CFAP65Q6ZU64 1925 aaKnown RBP26.79■■□□□ 1.88
PCDHB11-202ENST00000624887 ZC3H13Q5T200 1668 aaKnown RBP26.76■■□□□ 1.87
PCDHB11-202ENST00000624887 PANK3Q9H999 370 aa26.76■■□□□ 1.87
PCDHB11-202ENST00000624887 NOS1P29475 1434 aa26.76■■□□□ 1.87
PCDHB11-202ENST00000624887 CFAP70Q5T0N1 1121 aa26.75■■□□□ 1.87
PCDHB11-202ENST00000624887 CDCA8Q53HL2 280 aa26.75■■□□□ 1.87
PCDHB11-202ENST00000624887 REREQ9P2R6 1566 aa26.74■■□□□ 1.87
PCDHB11-202ENST00000624887 SIGLEC1Q9BZZ2 1709 aa26.74■■□□□ 1.87
PCDHB11-202ENST00000624887 PPLO60437 1756 aa26.73■■□□□ 1.87
PCDHB11-202ENST00000624887 ARHGAP31Q2M1Z3 1444 aa26.73■■□□□ 1.87
PCDHB11-202ENST00000624887 LRPPRCP42704 1394 aaKnown RBP26.73■■□□□ 1.87
PCDHB11-202ENST00000624887 DNAJC5Q9H3Z4 198 aa26.73■■□□□ 1.87
PCDHB11-202ENST00000624887 NLRP13Q86W25 1043 aa26.72■■□□□ 1.87
PCDHB11-202ENST00000624887 PIK3C2BO00750 1634 aa26.71■■□□□ 1.87
PCDHB11-202ENST00000624887 CHGAP10645 457 aaKnown RBP26.7■■□□□ 1.86
PCDHB11-202ENST00000624887 SYNMO15061 1565 aa26.7■■□□□ 1.86
PCDHB11-202ENST00000624887 SETBP1Q9Y6X0 1596 aa26.69■■□□□ 1.86
PCDHB11-202ENST00000624887 SLC24A1O60721 1099 aa26.69■■□□□ 1.86
PCDHB11-202ENST00000624887 RPGRIP1LQ68CZ1 1315 aa26.69■■□□□ 1.86
PCDHB11-202ENST00000624887 BCANQ96GW7 911 aa26.69■■□□□ 1.86
PCDHB11-202ENST00000624887 AGLP35573 1532 aa26.68■■□□□ 1.86
PCDHB11-202ENST00000624887 PIK3C2GO75747 1445 aa26.67■■□□□ 1.86
PCDHB11-202ENST00000624887 ARHGEF40Q8TER5 1519 aa26.66■■□□□ 1.86
PCDHB11-202ENST00000624887 MYO3AQ8NEV4 1616 aa26.66■■□□□ 1.86
PCDHB11-202ENST00000624887 KDM5AP29375 1690 aaKnown RBP26.64■■□□□ 1.86
PCDHB11-202ENST00000624887 CC2D1BQ5T0F9 858 aaKnown RBP26.64■■□□□ 1.85
PCDHB11-202ENST00000624887 MYOM1P52179 1685 aa26.63■■□□□ 1.85
PCDHB11-202ENST00000624887 TRHP20396 242 aaPredicted RBP26.63■■□□□ 1.85
PCDHB11-202ENST00000624887 C14orf93Q9H972 538 aaKnown RBP26.62■■□□□ 1.85
PCDHB11-202ENST00000624887 SBNO2Q9Y2G9 1366 aa26.61■■□□□ 1.85
PCDHB11-202ENST00000624887 SMG6Q86US8 1419 aaKnown RBP26.6■■□□□ 1.85
PCDHB11-202ENST00000624887 ERVK-7P63135 1459 aa26.6■■□□□ 1.85
PCDHB11-202ENST00000624887 ADGRB1O14514 1584 aa26.58■■□□□ 1.85
PCDHB11-202ENST00000624887 PPP6R1Q9UPN7 881 aa26.58■■□□□ 1.85
PCDHB11-202ENST00000624887 KNSTRNQ9Y448 316 aa26.58■■□□□ 1.85
PCDHB11-202ENST00000624887 NEXMIFQ5QGS0 1516 aa26.57■■□□□ 1.84
PCDHB11-202ENST00000624887 SLC52A1Q9NWF4 448 aa26.57■■□□□ 1.84
PCDHB11-202ENST00000624887 PREX1Q8TCU6 1659 aa26.56■■□□□ 1.84
PCDHB11-202ENST00000624887 AMER1Q5JTC6 1135 aaPredicted RBP26.55■■□□□ 1.84
PCDHB11-202ENST00000624887 ERICH6BQ5W0A0 696 aa26.55■■□□□ 1.84
PCDHB11-202ENST00000624887 IDI1Q13907 227 aa26.54■■□□□ 1.84
PCDHB11-202ENST00000624887 ASXL1Q8IXJ9 1541 aa26.54■■□□□ 1.84
PCDHB11-202ENST00000624887 VGFO15240 615 aaPredicted RBP26.53■■□□□ 1.84
PCDHB11-202ENST00000624887 NUDCQ9Y266 331 aa26.53■■□□□ 1.84
PCDHB11-202ENST00000624887 CENPJQ9HC77 1338 aaPredicted RBP26.53■■□□□ 1.84
PCDHB11-202ENST00000624887 INSRP06213 1382 aa26.53■■□□□ 1.84
PCDHB11-202ENST00000624887 NPC1L1Q9UHC9 1359 aa26.53■■□□□ 1.84
PCDHB11-202ENST00000624887 ZFYVE9O95405 1425 aa26.5■■□□□ 1.83
PCDHB11-202ENST00000624887 QRICH2Q9H0J4 1663 aa26.48■■□□□ 1.83
PCDHB11-202ENST00000624887 IRX6P78412 446 aaPredicted RBP26.48■■□□□ 1.83
PCDHB11-202ENST00000624887 TRAK1Q9UPV9 953 aa26.48■■□□□ 1.83
PCDHB11-202ENST00000624887 TMEM131LA2VDJ0 1609 aa26.48■■□□□ 1.83
PCDHB11-202ENST00000624887 MYO5BQ9ULV0 1848 aa26.46■■□□□ 1.83
PCDHB11-202ENST00000624887 MLECQ14165 292 aa26.46■■□□□ 1.83
PCDHB11-202ENST00000624887 TMEM132EQ6IEE7 984 aa26.46■■□□□ 1.83
PCDHB11-202ENST00000624887 BLMP54132 1417 aaPredicted RBP26.44■■□□□ 1.82
PCDHB11-202ENST00000624887 PPP2R1AP30153 589 aa26.44■■□□□ 1.82
PCDHB11-202ENST00000624887 CLTCQ00610 1675 aaKnown RBP26.42■■□□□ 1.82
PCDHB11-202ENST00000624887 SENP3-EIF4A1A0A087X0R7 540 aa26.42■■□□□ 1.82
PCDHB11-202ENST00000624887 NUTM2DQ5VT03 806 aaPredicted RBP26.42■■□□□ 1.82
PCDHB11-202ENST00000624887 ARHGEF28Q8N1W1 1705 aaKnown RBP26.4■■□□□ 1.82
PCDHB11-202ENST00000624887 RNF123Q5XPI4 1314 aa26.4■■□□□ 1.82
PCDHB11-202ENST00000624887 FBXO31Q5XUX0 539 aaPredicted RBP26.39■■□□□ 1.82
PCDHB11-202ENST00000624887 TSHZ2Q9NRE2 1034 aa26.38■■□□□ 1.81
PCDHB11-202ENST00000624887 CARD14Q9BXL6 1004 aa26.37■■□□□ 1.81
PCDHB11-202ENST00000624887 PDE3BQ13370 1112 aa26.37■■□□□ 1.81
PCDHB11-202ENST00000624887 PPP4R2Q9NY27 417 aa26.37■■□□□ 1.81
PCDHB11-202ENST00000624887 ESF1Q9H501 851 aaKnown RBP26.36■■□□□ 1.81
PCDHB11-202ENST00000624887 PUS7Q96PZ0 661 aaKnown RBP26.34■■□□□ 1.81
PCDHB11-202ENST00000624887 SPATA31D1Q6ZQQ2 1576 aa26.32■■□□□ 1.8
PCDHB11-202ENST00000624887 ADAMTS8Q9UP79 889 aa26.31■■□□□ 1.8
PCDHB11-202ENST00000624887 ZMYM3Q14202 1370 aa26.31■■□□□ 1.8
PCDHB11-202ENST00000624887 TULP4Q9NRJ4 1543 aa26.29■■□□□ 1.8
PCDHB11-202ENST00000624887 EVC2Q86UK5 1308 aa26.29■■□□□ 1.8
PCDHB11-202ENST00000624887 SALL2Q9Y467 1007 aaPredicted RBP26.29■■□□□ 1.8
PCDHB11-202ENST00000624887 WDR43Q15061 677 aaKnown RBP eCLIP26.28■■□□□ 1.8
PCDHB11-202ENST00000624887 SLC12A5Q9H2X9 1139 aa26.27■■□□□ 1.8
PCDHB11-202ENST00000624887 NSD3Q9BZ95 1437 aa26.26■■□□□ 1.8
PCDHB11-202ENST00000624887 STAG3Q9UJ98 1225 aa26.25■■□□□ 1.79
PCDHB11-202ENST00000624887 USP32Q8NFA0 1604 aa26.25■■□□□ 1.79
PCDHB11-202ENST00000624887 A2ML1A8K2U0 1454 aa26.23■■□□□ 1.79
PCDHB11-202ENST00000624887 ALKQ9UM73 1620 aa26.23■■□□□ 1.79
PCDHB11-202ENST00000624887 PTPRMP28827 1452 aa26.23■■□□□ 1.79
PCDHB11-202ENST00000624887 YTHDC2Q9H6S0 1430 aaKnown RBP26.22■■□□□ 1.79
PCDHB11-202ENST00000624887 STK26Q9P289 416 aa26.2■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms