RNA–Protein interactions for RNA: ENST00000624688.2

C3orf56-201, Transcript of chromosome 3 open reading frame 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf56, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56-201ENST00000624688 PPLO60437 1756 aa18.29■□□□□ 0.52
C3orf56-201ENST00000624688 GTF3C3Q9Y5Q9 886 aa18.29■□□□□ 0.52
C3orf56-201ENST00000624688 ADGRF5Q8IZF2 1346 aa18.29■□□□□ 0.52
C3orf56-201ENST00000624688 SCAF11Q99590 1463 aaKnown RBP18.27■□□□□ 0.51
C3orf56-201ENST00000624688 DISP3Q9P2K9 1392 aa18.27■□□□□ 0.51
C3orf56-201ENST00000624688 ARHGEF40Q8TER5 1519 aa18.26■□□□□ 0.51
C3orf56-201ENST00000624688 PREX1Q8TCU6 1659 aa18.26■□□□□ 0.51
C3orf56-201ENST00000624688 CCDC184Q52MB2 194 aa18.24■□□□□ 0.51
C3orf56-201ENST00000624688 CHGAP10645 457 aaKnown RBP18.23■□□□□ 0.51
C3orf56-201ENST00000624688 CFAP70Q5T0N1 1121 aa18.23■□□□□ 0.51
C3orf56-201ENST00000624688 RPGRIP1LQ68CZ1 1315 aa18.22■□□□□ 0.51
C3orf56-201ENST00000624688 PIK3C2GO75747 1445 aa18.21■□□□□ 0.51
C3orf56-201ENST00000624688 PPP6R1Q9UPN7 881 aa18.2■□□□□ 0.5
C3orf56-201ENST00000624688 NEXMIFQ5QGS0 1516 aa18.2■□□□□ 0.5
C3orf56-201ENST00000624688 TMF1P82094 1093 aa18.2■□□□□ 0.5
C3orf56-201ENST00000624688 IDI1Q13907 227 aa18.2■□□□□ 0.5
C3orf56-201ENST00000624688 SETBP1Q9Y6X0 1596 aa18.2■□□□□ 0.5
C3orf56-201ENST00000624688 CLTCQ00610 1675 aaKnown RBP18.2■□□□□ 0.5
C3orf56-201ENST00000624688 SLC52A1Q9NWF4 448 aa18.18■□□□□ 0.5
C3orf56-201ENST00000624688 ERVK-7P63135 1459 aa18.18■□□□□ 0.5
C3orf56-201ENST00000624688 TMEM131LA2VDJ0 1609 aa18.18■□□□□ 0.5
C3orf56-201ENST00000624688 PHF23Q9BUL5 403 aaPredicted RBP18.17■□□□□ 0.5
C3orf56-201ENST00000624688 MYO5BQ9ULV0 1848 aa18.17■□□□□ 0.5
C3orf56-201ENST00000624688 EIF3AQ14152 1382 aaKnown RBP18.16■□□□□ 0.5
C3orf56-201ENST00000624688 FBXO31Q5XUX0 539 aaPredicted RBP18.16■□□□□ 0.5
C3orf56-201ENST00000624688 ADGRB1O14514 1584 aa18.15■□□□□ 0.5
C3orf56-201ENST00000624688 C14orf93Q9H972 538 aaKnown RBP18.15■□□□□ 0.5
C3orf56-201ENST00000624688 MYO3AQ8NEV4 1616 aa18.15■□□□□ 0.5
C3orf56-201ENST00000624688 MRS2Q9HD23 443 aa18.15■□□□□ 0.5
C3orf56-201ENST00000624688 PER1O15534 1290 aaPredicted RBP18.14■□□□□ 0.49
C3orf56-201ENST00000624688 SPATA31D1Q6ZQQ2 1576 aa18.12■□□□□ 0.49
C3orf56-201ENST00000624688 ZFYVE9O95405 1425 aa18.12■□□□□ 0.49
C3orf56-201ENST00000624688 VGFO15240 615 aaPredicted RBP18.11■□□□□ 0.49
C3orf56-201ENST00000624688 CNGB1Q14028 1251 aaPredicted RBP18.11■□□□□ 0.49
C3orf56-201ENST00000624688 KTN1Q86UP2 1357 aaKnown RBP18.11■□□□□ 0.49
C3orf56-201ENST00000624688 MLECQ14165 292 aa18.1■□□□□ 0.49
C3orf56-201ENST00000624688 MYOM1P52179 1685 aa18.09■□□□□ 0.49
C3orf56-201ENST00000624688 NUTM2DQ5VT03 806 aaPredicted RBP18.09■□□□□ 0.49
C3orf56-201ENST00000624688 PANK3Q9H999 370 aa18.09■□□□□ 0.49
C3orf56-201ENST00000624688 RALBP1Q15311 655 aa18.08■□□□□ 0.48
C3orf56-201ENST00000624688 KDM5AP29375 1690 aaKnown RBP18.08■□□□□ 0.48
C3orf56-201ENST00000624688 PARD3Q8TEW0 1356 aa18.07■□□□□ 0.48
C3orf56-201ENST00000624688 SBNO2Q9Y2G9 1366 aa18.07■□□□□ 0.48
C3orf56-201ENST00000624688 HNRNPUQ00839 825 aaKnown RBP eCLIP18.07■□□□□ 0.48
C3orf56-201ENST00000624688 CDCA8Q53HL2 280 aa18.07■□□□□ 0.48
C3orf56-201ENST00000624688 FAM9BQ8IZU0 186 aa18.07■□□□□ 0.48
C3orf56-201ENST00000624688 MYBBP1AQ9BQG0 1328 aaKnown RBP18.06■□□□□ 0.48
C3orf56-201ENST00000624688 TMEM132EQ6IEE7 984 aa18.06■□□□□ 0.48
C3orf56-201ENST00000624688 QRICH2Q9H0J4 1663 aa18.04■□□□□ 0.48
C3orf56-201ENST00000624688 SLC24A1O60721 1099 aa18.04■□□□□ 0.48
C3orf56-201ENST00000624688 ASXL1Q8IXJ9 1541 aa18.04■□□□□ 0.48
C3orf56-201ENST00000624688 CENPJQ9HC77 1338 aaPredicted RBP18.04■□□□□ 0.48
C3orf56-201ENST00000624688 TRAK1Q9UPV9 953 aa18.03■□□□□ 0.48
C3orf56-201ENST00000624688 ZMYM3Q14202 1370 aa18.03■□□□□ 0.48
C3orf56-201ENST00000624688 A2ML1A8K2U0 1454 aa18.03■□□□□ 0.48
C3orf56-201ENST00000624688 ARHGEF28Q8N1W1 1705 aaKnown RBP18.03■□□□□ 0.48
C3orf56-201ENST00000624688 BRD4O60885 1362 aaPredicted RBP18.03■□□□□ 0.48
C3orf56-201ENST00000624688 PNISRQ8TF01 805 aaKnown RBP18■□□□□ 0.47
C3orf56-201ENST00000624688 CC2D1BQ5T0F9 858 aaKnown RBP17.98■□□□□ 0.47
C3orf56-201ENST00000624688 TMC1Q8TDI8 760 aa17.98■□□□□ 0.47
C3orf56-201ENST00000624688 ESF1Q9H501 851 aaKnown RBP17.98■□□□□ 0.47
C3orf56-201ENST00000624688 STAG3Q9UJ98 1225 aa17.97■□□□□ 0.47
C3orf56-201ENST00000624688 ALKQ9UM73 1620 aa17.97■□□□□ 0.47
C3orf56-201ENST00000624688 NLRP13Q86W25 1043 aa17.96■□□□□ 0.47
C3orf56-201ENST00000624688 LRPPRCP42704 1394 aaKnown RBP17.96■□□□□ 0.47
C3orf56-201ENST00000624688 AMER1Q5JTC6 1135 aaPredicted RBP17.95■□□□□ 0.46
C3orf56-201ENST00000624688 RIMS2Q9UQ26 1411 aa17.95■□□□□ 0.46
C3orf56-201ENST00000624688 TRHP20396 242 aaPredicted RBP17.95■□□□□ 0.46
C3orf56-201ENST00000624688 KNSTRNQ9Y448 316 aa17.95■□□□□ 0.46
C3orf56-201ENST00000624688 ZBED9Q6R2W3 1325 aa17.94■□□□□ 0.46
C3orf56-201ENST00000624688 SENP3Q9H4L4 574 aaPredicted RBP17.94■□□□□ 0.46
C3orf56-201ENST00000624688 TULP4Q9NRJ4 1543 aa17.93■□□□□ 0.46
C3orf56-201ENST00000624688 SETD1AO15047 1707 aaKnown RBP17.93■□□□□ 0.46
C3orf56-201ENST00000624688 TNRQ92752 1358 aa17.93■□□□□ 0.46
C3orf56-201ENST00000624688 NPC1L1Q9UHC9 1359 aa17.93■□□□□ 0.46
C3orf56-201ENST00000624688 PTPRMP28827 1452 aa17.93■□□□□ 0.46
C3orf56-201ENST00000624688 YTHDC2Q9H6S0 1430 aaKnown RBP17.92■□□□□ 0.46
C3orf56-201ENST00000624688 NRXN3Q9Y4C0 1643 aa17.9■□□□□ 0.46
C3orf56-201ENST00000624688 CARD14Q9BXL6 1004 aa17.9■□□□□ 0.46
C3orf56-201ENST00000624688 UBR1Q8IWV7 1749 aa17.9■□□□□ 0.46
C3orf56-201ENST00000624688 STK26Q9P289 416 aa17.89■□□□□ 0.46
C3orf56-201ENST00000624688 SUPT16HQ9Y5B9 1047 aaKnown RBP17.89■□□□□ 0.46
C3orf56-201ENST00000624688 PUS7Q96PZ0 661 aaKnown RBP17.89■□□□□ 0.45
C3orf56-201ENST00000624688 EVC2Q86UK5 1308 aa17.87■□□□□ 0.45
C3orf56-201ENST00000624688 C3P01024 1663 aa17.87■□□□□ 0.45
C3orf56-201ENST00000624688 PPP2R1AP30153 589 aa17.86■□□□□ 0.45
C3orf56-201ENST00000624688 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.85■□□□□ 0.45
C3orf56-201ENST00000624688 SLC12A5Q9H2X9 1139 aa17.85■□□□□ 0.45
C3orf56-201ENST00000624688 DNAJC5Q9H3Z4 198 aa17.85■□□□□ 0.45
C3orf56-201ENST00000624688 FER1L4A9Z1Z3 1794 aa17.85■□□□□ 0.45
C3orf56-201ENST00000624688 DLC1Q96QB1 1528 aa17.85■□□□□ 0.45
C3orf56-201ENST00000624688 SAFB2Q14151 953 aaKnown RBP eCLIP17.84■□□□□ 0.45
C3orf56-201ENST00000624688 PRAM1Q96QH2 718 aa17.84■□□□□ 0.45
C3orf56-201ENST00000624688 CEBPAP49715 358 aaPredicted RBP17.84■□□□□ 0.45
C3orf56-201ENST00000624688 NLRP1Q9C000 1473 aa17.83■□□□□ 0.44
C3orf56-201ENST00000624688 USP32Q8NFA0 1604 aa17.82■□□□□ 0.44
C3orf56-201ENST00000624688 TMEM2Q9UHN6 1383 aa17.82■□□□□ 0.44
C3orf56-201ENST00000624688 NSD3Q9BZ95 1437 aa17.82■□□□□ 0.44
C3orf56-201ENST00000624688 CABP2Q9NPB3 220 aa17.81■□□□□ 0.44
C3orf56-201ENST00000624688 INSRP06213 1382 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms