RNA–Protein interactions for RNA: ENST00000624513.1

PCDHB3-202, Transcript of protocadherin beta 3, humanhuman

TSL 3

Gene PCDHB3, Length 162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-202ENST00000624513 PPP1R15AO75807 674 aaPredicted RBP14.6□□□□□ -0.07
PCDHB3-202ENST00000624513 UBR1Q8IWV7 1749 aa14.6□□□□□ -0.07
PCDHB3-202ENST00000624513 ZNF142P52746 1687 aaPredicted RBP14.59□□□□□ -0.07
PCDHB3-202ENST00000624513 KDM2AQ9Y2K7 1162 aa14.59□□□□□ -0.07
PCDHB3-202ENST00000624513 ZFYVE9O95405 1425 aa14.58□□□□□ -0.07
PCDHB3-202ENST00000624513 TXNDC2Q86VQ3 553 aa14.58□□□□□ -0.08
PCDHB3-202ENST00000624513 ANKLE2Q86XL3 938 aa14.58□□□□□ -0.08
PCDHB3-202ENST00000624513 RIMS2Q9UQ26 1411 aa14.58□□□□□ -0.08
PCDHB3-202ENST00000624513 SLIT1O75093 1534 aa14.57□□□□□ -0.08
PCDHB3-202ENST00000624513 MYO5BQ9ULV0 1848 aa14.56□□□□□ -0.08
PCDHB3-202ENST00000624513 ARHGAP23Q9P227 1491 aa14.56□□□□□ -0.08
PCDHB3-202ENST00000624513 MYOM2P54296 1465 aa14.55□□□□□ -0.08
PCDHB3-202ENST00000624513 NEXMIFQ5QGS0 1516 aa14.55□□□□□ -0.08
PCDHB3-202ENST00000624513 LTKP29376 864 aa14.54□□□□□ -0.08
PCDHB3-202ENST00000624513 AEBP2Q6ZN18 517 aaPredicted RBP14.54□□□□□ -0.08
PCDHB3-202ENST00000624513 PPLO60437 1756 aa14.53□□□□□ -0.08
PCDHB3-202ENST00000624513 ADGRF5Q8IZF2 1346 aa14.53□□□□□ -0.08
PCDHB3-202ENST00000624513 NUTM2DQ5VT03 806 aaPredicted RBP14.53□□□□□ -0.08
PCDHB3-202ENST00000624513 LMTK3Q96Q04 1460 aa14.52□□□□□ -0.08
PCDHB3-202ENST00000624513 IFT172Q9UG01 1749 aa14.52□□□□□ -0.09
PCDHB3-202ENST00000624513 NRXN1Q9ULB1 1477 aa14.51□□□□□ -0.09
PCDHB3-202ENST00000624513 PRAG1Q86YV5 1406 aa14.51□□□□□ -0.09
PCDHB3-202ENST00000624513 PLEKHG1Q9ULL1 1385 aa14.51□□□□□ -0.09
PCDHB3-202ENST00000624513 SCAF11Q99590 1463 aaKnown RBP14.5□□□□□ -0.09
PCDHB3-202ENST00000624513 NBPF8Q3BBV2 869 aa14.5□□□□□ -0.09
PCDHB3-202ENST00000624513 BCANQ96GW7 911 aa14.5□□□□□ -0.09
PCDHB3-202ENST00000624513 C14orf93Q9H972 538 aaKnown RBP14.5□□□□□ -0.09
PCDHB3-202ENST00000624513 HSPA2P54652 639 aa14.49□□□□□ -0.09
PCDHB3-202ENST00000624513 PIK3C2GO75747 1445 aa14.49□□□□□ -0.09
PCDHB3-202ENST00000624513 NCKAP5LQ9HCH0 1330 aa14.47□□□□□ -0.09
PCDHB3-202ENST00000624513 MED14O60244 1454 aa14.47□□□□□ -0.09
PCDHB3-202ENST00000624513 CFAP70Q5T0N1 1121 aa14.47□□□□□ -0.09
PCDHB3-202ENST00000624513 TBX22Q9Y458 520 aa14.47□□□□□ -0.09
PCDHB3-202ENST00000624513 DMRT2Q9Y5R5 561 aa14.46□□□□□ -0.09
PCDHB3-202ENST00000624513 NPHP4O75161 1426 aaPredicted RBP14.45□□□□□ -0.1
PCDHB3-202ENST00000624513 SETBP1Q9Y6X0 1596 aa14.44□□□□□ -0.1
PCDHB3-202ENST00000624513 KIAA1210Q9ULL0 1709 aa14.44□□□□□ -0.1
PCDHB3-202ENST00000624513 ROCK2O75116 1388 aaKnown RBP14.43□□□□□ -0.1
PCDHB3-202ENST00000624513 LAMC1P11047 1609 aa14.42□□□□□ -0.1
PCDHB3-202ENST00000624513 ALKQ9UM73 1620 aa14.42□□□□□ -0.1
PCDHB3-202ENST00000624513 NBPF1Q3BBV0 1214 aa14.42□□□□□ -0.1
PCDHB3-202ENST00000624513 SLC26A8Q96RN1 970 aa14.42□□□□□ -0.1
PCDHB3-202ENST00000624513 CARD11Q9BXL7 1154 aa14.42□□□□□ -0.1
PCDHB3-202ENST00000624513 RALGAPBQ86X10 1494 aa14.42□□□□□ -0.1
PCDHB3-202ENST00000624513 ADAMTS13Q76LX8 1427 aa14.41□□□□□ -0.1
PCDHB3-202ENST00000624513 POLR1AO95602 1720 aaPredicted RBP14.41□□□□□ -0.1
PCDHB3-202ENST00000624513 SENP3Q9H4L4 574 aaPredicted RBP14.41□□□□□ -0.1
PCDHB3-202ENST00000624513 GPRASP1Q5JY77 1395 aa14.41□□□□□ -0.1
PCDHB3-202ENST00000624513 PIK3R4Q99570 1358 aa14.41□□□□□ -0.1
PCDHB3-202ENST00000624513 TRPM1Q7Z4N2 1603 aa14.41□□□□□ -0.1
PCDHB3-202ENST00000624513 DIP2AQ14689 1571 aa14.4□□□□□ -0.1
PCDHB3-202ENST00000624513 TMEM132EQ6IEE7 984 aa14.39□□□□□ -0.11
PCDHB3-202ENST00000624513 NRXN3Q9Y4C0 1643 aa14.39□□□□□ -0.11
PCDHB3-202ENST00000624513 IQGAP1P46940 1657 aa14.39□□□□□ -0.11
PCDHB3-202ENST00000624513 STRCQ7RTU9 1775 aa14.37□□□□□ -0.11
PCDHB3-202ENST00000624513 METP08581 1390 aa14.37□□□□□ -0.11
PCDHB3-202ENST00000624513 SIRT1Q96EB6 747 aa14.37□□□□□ -0.11
PCDHB3-202ENST00000624513 LRPPRCP42704 1394 aaKnown RBP14.36□□□□□ -0.11
PCDHB3-202ENST00000624513 ABCC11Q96J66 1382 aa14.36□□□□□ -0.11
PCDHB3-202ENST00000624513 ADGRB1O14514 1584 aa14.36□□□□□ -0.11
PCDHB3-202ENST00000624513 YTHDC2Q9H6S0 1430 aaKnown RBP14.36□□□□□ -0.11
PCDHB3-202ENST00000624513 EIF4G2P78344 907 aaKnown RBP eCLIP14.36□□□□□ -0.11
PCDHB3-202ENST00000624513 SLC24A1O60721 1099 aa14.35□□□□□ -0.11
PCDHB3-202ENST00000624513 KCNA6P17658 529 aa14.35□□□□□ -0.11
PCDHB3-202ENST00000624513 STK26Q9P289 416 aa14.35□□□□□ -0.11
PCDHB3-202ENST00000624513 AMOTL2Q9Y2J4 779 aa14.35□□□□□ -0.11
PCDHB3-202ENST00000624513 EIF3AQ14152 1382 aaKnown RBP14.34□□□□□ -0.11
PCDHB3-202ENST00000624513 TRAK1Q9UPV9 953 aa14.34□□□□□ -0.11
PCDHB3-202ENST00000624513 SETD1AO15047 1707 aaKnown RBP14.34□□□□□ -0.11
PCDHB3-202ENST00000624513 USP47Q96K76 1375 aa14.32□□□□□ -0.12
PCDHB3-202ENST00000624513 TECPR2O15040 1411 aa14.32□□□□□ -0.12
PCDHB3-202ENST00000624513 PTPRUQ92729 1446 aa14.31□□□□□ -0.12
PCDHB3-202ENST00000624513 ASXL1Q8IXJ9 1541 aa14.31□□□□□ -0.12
PCDHB3-202ENST00000624513 ST20-MTHFSA0A0A6YYL1 179 aa14.3□□□□□ -0.12
PCDHB3-202ENST00000624513 POGKQ9P215 609 aa14.3□□□□□ -0.12
PCDHB3-202ENST00000624513 FAM135BQ49AJ0 1406 aa14.3□□□□□ -0.12
PCDHB3-202ENST00000624513 DLC1Q96QB1 1528 aa14.3□□□□□ -0.12
PCDHB3-202ENST00000624513 CHD2O14647 1828 aaKnown RBP14.29□□□□□ -0.12
PCDHB3-202ENST00000624513 HSPA5P11021 654 aaKnown RBP14.29□□□□□ -0.12
PCDHB3-202ENST00000624513 CENPJQ9HC77 1338 aaPredicted RBP14.29□□□□□ -0.12
PCDHB3-202ENST00000624513 PRAM1Q96QH2 718 aa14.28□□□□□ -0.12
PCDHB3-202ENST00000624513 PTCH1Q13635 1447 aa14.27□□□□□ -0.12
PCDHB3-202ENST00000624513 ROBO2Q9HCK4 1378 aa14.26□□□□□ -0.13
PCDHB3-202ENST00000624513 WAPLQ7Z5K2 1190 aa14.26□□□□□ -0.13
PCDHB3-202ENST00000624513 PROSER2Q86WR7 435 aaPredicted RBP14.26□□□□□ -0.13
PCDHB3-202ENST00000624513 KNDC1Q76NI1 1749 aa14.26□□□□□ -0.13
PCDHB3-202ENST00000624513 CPS1P31327 1500 aa14.25□□□□□ -0.13
PCDHB3-202ENST00000624513 XRN1Q8IZH2 1706 aaKnown RBP14.25□□□□□ -0.13
PCDHB3-202ENST00000624513 NWD1Q149M9 1564 aa14.25□□□□□ -0.13
PCDHB3-202ENST00000624513 NKTRP30414 1462 aaKnown RBP14.25□□□□□ -0.13
PCDHB3-202ENST00000624513 SBNO2Q9Y2G9 1366 aa14.24□□□□□ -0.13
PCDHB3-202ENST00000624513 TESK2Q96S53 571 aa14.24□□□□□ -0.13
PCDHB3-202ENST00000624513 NCOA3Q9Y6Q9 1424 aa14.24□□□□□ -0.13
PCDHB3-202ENST00000624513 ZNF335Q9H4Z2 1342 aaPredicted RBP14.23□□□□□ -0.13
PCDHB3-202ENST00000624513 TMF1P82094 1093 aa14.23□□□□□ -0.13
PCDHB3-202ENST00000624513 CDCA8Q53HL2 280 aa14.23□□□□□ -0.13
PCDHB3-202ENST00000624513 ARHGEF28Q8N1W1 1705 aaKnown RBP14.23□□□□□ -0.13
PCDHB3-202ENST00000624513 SAFB2Q14151 953 aaKnown RBP eCLIP14.22□□□□□ -0.13
PCDHB3-202ENST00000624513 HIRIP3Q9BW71 556 aaPredicted RBP14.22□□□□□ -0.13
PCDHB3-202ENST00000624513 EVC2Q86UK5 1308 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms