RNA–Protein interactions for RNA: ENST00000624032.3

ATRX-213, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 3,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-213ENST00000624032 STAG3Q9UJ98 1225 aa16.08■□□□□ 0.17
ATRX-213ENST00000624032 ADGRF5Q8IZF2 1346 aa16.08■□□□□ 0.16
ATRX-213ENST00000624032 ADAMTSL3P82987 1691 aa16.08■□□□□ 0.16
ATRX-213ENST00000624032 TMEM131LA2VDJ0 1609 aa16.07■□□□□ 0.16
ATRX-213ENST00000624032 NBPF1Q3BBV0 1214 aa16.07■□□□□ 0.16
ATRX-213ENST00000624032 NEURL4Q96JN8 1562 aa16.07■□□□□ 0.16
ATRX-213ENST00000624032 BCANQ96GW7 911 aa16.06■□□□□ 0.16
ATRX-213ENST00000624032 BCL11AQ9H165 835 aa16.05■□□□□ 0.16
ATRX-213ENST00000624032 IFT172Q9UG01 1749 aa16.05■□□□□ 0.16
ATRX-213ENST00000624032 FKBP8Q14318 412 aa16.05■□□□□ 0.16
ATRX-213ENST00000624032 RALGAPBQ86X10 1494 aa16.04■□□□□ 0.16
ATRX-213ENST00000624032 PPLO60437 1756 aa16.04■□□□□ 0.16
ATRX-213ENST00000624032 HSPA5P11021 654 aaKnown RBP16.04■□□□□ 0.16
ATRX-213ENST00000624032 TRPM1Q7Z4N2 1603 aa16.03■□□□□ 0.16
ATRX-213ENST00000624032 CARD11Q9BXL7 1154 aa16.03■□□□□ 0.16
ATRX-213ENST00000624032 ROCK2O75116 1388 aaKnown RBP16.03■□□□□ 0.16
ATRX-213ENST00000624032 NEXMIFQ5QGS0 1516 aa16.02■□□□□ 0.16
ATRX-213ENST00000624032 A2ML1A8K2U0 1454 aa16.02■□□□□ 0.16
ATRX-213ENST00000624032 RPGRIP1LQ68CZ1 1315 aa16.02■□□□□ 0.15
ATRX-213ENST00000624032 CFAP70Q5T0N1 1121 aa16.01■□□□□ 0.15
ATRX-213ENST00000624032 EIF4G2P78344 907 aaKnown RBP eCLIP16.01■□□□□ 0.15
ATRX-213ENST00000624032 MYOM2P54296 1465 aa16.01■□□□□ 0.15
ATRX-213ENST00000624032 NEFLP07196 543 aa15.99■□□□□ 0.15
ATRX-213ENST00000624032 STAC3Q96MF2 364 aa15.99■□□□□ 0.15
ATRX-213ENST00000624032 VGFO15240 615 aaPredicted RBP15.98■□□□□ 0.15
ATRX-213ENST00000624032 USP47Q96K76 1375 aa15.98■□□□□ 0.15
ATRX-213ENST00000624032 NRXN1Q9ULB1 1477 aa15.97■□□□□ 0.15
ATRX-213ENST00000624032 UBR1Q8IWV7 1749 aa15.97■□□□□ 0.15
ATRX-213ENST00000624032 RIMS2Q9UQ26 1411 aa15.96■□□□□ 0.15
ATRX-213ENST00000624032 PTPRMP28827 1452 aa15.96■□□□□ 0.15
ATRX-213ENST00000624032 NLRP1Q9C000 1473 aa15.96■□□□□ 0.15
ATRX-213ENST00000624032 PIK3C2GO75747 1445 aa15.96■□□□□ 0.14
ATRX-213ENST00000624032 DDX10Q13206 875 aaKnown RBP15.96■□□□□ 0.14
ATRX-213ENST00000624032 RBM19Q9Y4C8 960 aaKnown RBP15.95■□□□□ 0.14
ATRX-213ENST00000624032 GPRASP1Q5JY77 1395 aa15.94■□□□□ 0.14
ATRX-213ENST00000624032 MYO3AQ8NEV4 1616 aa15.94■□□□□ 0.14
ATRX-213ENST00000624032 TMEM132EQ6IEE7 984 aa15.94■□□□□ 0.14
ATRX-213ENST00000624032 C14orf93Q9H972 538 aaKnown RBP15.93■□□□□ 0.14
ATRX-213ENST00000624032 ST20-MTHFSA0A0A6YYL1 179 aa15.93■□□□□ 0.14
ATRX-213ENST00000624032 ZFYVE9O95405 1425 aa15.93■□□□□ 0.14
ATRX-213ENST00000624032 KDM4FA0A1W2PPD8 638 aa15.93■□□□□ 0.14
ATRX-213ENST00000624032 C11orf95C9JLR9 678 aaPredicted RBP15.93■□□□□ 0.14
ATRX-213ENST00000624032 TMEM2Q9UHN6 1383 aa15.92■□□□□ 0.14
ATRX-213ENST00000624032 LTKP29376 864 aa15.91■□□□□ 0.14
ATRX-213ENST00000624032 KIAA1210Q9ULL0 1709 aa15.91■□□□□ 0.14
ATRX-213ENST00000624032 KDM5AP29375 1690 aaKnown RBP15.9■□□□□ 0.14
ATRX-213ENST00000624032 CCER2I3L3R5 266 aa15.89■□□□□ 0.13
ATRX-213ENST00000624032 CEP170BQ9Y4F5 1589 aaPredicted RBP15.89■□□□□ 0.13
ATRX-213ENST00000624032 LAMC1P11047 1609 aa15.89■□□□□ 0.13
ATRX-213ENST00000624032 TXNDC2Q86VQ3 553 aa15.88■□□□□ 0.13
ATRX-213ENST00000624032 THEMISQ8N1K5 641 aaPredicted RBP15.88■□□□□ 0.13
ATRX-213ENST00000624032 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.88■□□□□ 0.13
ATRX-213ENST00000624032 SETD1BQ9UPS6 1966 aaKnown RBP15.88■□□□□ 0.13
ATRX-213ENST00000624032 TRAK1Q9UPV9 953 aa15.87■□□□□ 0.13
ATRX-213ENST00000624032 WASHC2AQ641Q2 1341 aa15.87■□□□□ 0.13
ATRX-213ENST00000624032 IQGAP1P46940 1657 aa15.87■□□□□ 0.13
ATRX-213ENST00000624032 ADGRB1O14514 1584 aa15.86■□□□□ 0.13
ATRX-213ENST00000624032 HDGFP51858 240 aaKnown RBP15.86■□□□□ 0.13
ATRX-213ENST00000624032 SCAF11Q99590 1463 aaKnown RBP15.86■□□□□ 0.13
ATRX-213ENST00000624032 STK26Q9P289 416 aa15.86■□□□□ 0.13
ATRX-213ENST00000624032 ALKQ9UM73 1620 aa15.86■□□□□ 0.13
ATRX-213ENST00000624032 POLR3GLQ9BT43 218 aa15.85■□□□□ 0.13
ATRX-213ENST00000624032 ASXL1Q8IXJ9 1541 aa15.85■□□□□ 0.13
ATRX-213ENST00000624032 ANP32CO43423 234 aa15.84■□□□□ 0.13
ATRX-213ENST00000624032 EID1Q9Y6B2 187 aa15.84■□□□□ 0.13
ATRX-213ENST00000624032 SETBP1Q9Y6X0 1596 aa15.84■□□□□ 0.13
ATRX-213ENST00000624032 ARHGAP23Q9P227 1491 aa15.84■□□□□ 0.13
ATRX-213ENST00000624032 NRXN3Q9Y4C0 1643 aa15.84■□□□□ 0.13
ATRX-213ENST00000624032 SLIT1O75093 1534 aa15.84■□□□□ 0.13
ATRX-213ENST00000624032 TESK2Q96S53 571 aa15.83■□□□□ 0.12
ATRX-213ENST00000624032 KIF7Q2M1P5 1343 aa15.83■□□□□ 0.12
ATRX-213ENST00000624032 ZNF142P52746 1687 aaPredicted RBP15.83■□□□□ 0.12
ATRX-213ENST00000624032 SLC26A8Q96RN1 970 aa15.82■□□□□ 0.12
ATRX-213ENST00000624032 CCDC7Q96M83 1385 aa15.82■□□□□ 0.12
ATRX-213ENST00000624032 METP08581 1390 aa15.81■□□□□ 0.12
ATRX-213ENST00000624032 SETD1AO15047 1707 aaKnown RBP15.8■□□□□ 0.12
ATRX-213ENST00000624032 PLEKHG1Q9ULL1 1385 aa15.8■□□□□ 0.12
ATRX-213ENST00000624032 SAFB2Q14151 953 aaKnown RBP eCLIP15.79■□□□□ 0.12
ATRX-213ENST00000624032 ADAMTS13Q76LX8 1427 aa15.79■□□□□ 0.12
ATRX-213ENST00000624032 DISP3Q9P2K9 1392 aa15.79■□□□□ 0.12
ATRX-213ENST00000624032 YTHDC2Q9H6S0 1430 aaKnown RBP15.79■□□□□ 0.12
ATRX-213ENST00000624032 EIF3AQ14152 1382 aaKnown RBP15.78■□□□□ 0.12
ATRX-213ENST00000624032 ANKLE2Q86XL3 938 aa15.77■□□□□ 0.12
ATRX-213ENST00000624032 CENPJQ9HC77 1338 aaPredicted RBP15.77■□□□□ 0.11
ATRX-213ENST00000624032 HSPA2P54652 639 aa15.76■□□□□ 0.11
ATRX-213ENST00000624032 NCKAP5LQ9HCH0 1330 aa15.76■□□□□ 0.11
ATRX-213ENST00000624032 POLR1AO95602 1720 aaPredicted RBP15.76■□□□□ 0.11
ATRX-213ENST00000624032 ARHGEF28Q8N1W1 1705 aaKnown RBP15.76■□□□□ 0.11
ATRX-213ENST00000624032 MSH5O43196 834 aa15.75■□□□□ 0.11
ATRX-213ENST00000624032 TMF1P82094 1093 aa15.75■□□□□ 0.11
ATRX-213ENST00000624032 PRAM1Q96QH2 718 aa15.74■□□□□ 0.11
ATRX-213ENST00000624032 WAPLQ7Z5K2 1190 aa15.74■□□□□ 0.11
ATRX-213ENST00000624032 FANCIQ9NVI1 1328 aa15.74■□□□□ 0.11
ATRX-213ENST00000624032 LRPPRCP42704 1394 aaKnown RBP15.73■□□□□ 0.11
ATRX-213ENST00000624032 MED14O60244 1454 aa15.73■□□□□ 0.11
ATRX-213ENST00000624032 QRICH2Q9H0J4 1663 aa15.73■□□□□ 0.11
ATRX-213ENST00000624032 POGKQ9P215 609 aa15.73■□□□□ 0.11
ATRX-213ENST00000624032 PLEKHH1Q9ULM0 1364 aa15.72■□□□□ 0.11
ATRX-213ENST00000624032 TBX22Q9Y458 520 aa15.71■□□□□ 0.11
ATRX-213ENST00000624032 MINK1Q8N4C8 1332 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms