RNA–Protein interactions for RNA: ENST00000623391.1

AP000542.3-201, humanhuman

BASIC

Gene AP000542.3, Length 6,114 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000542.3-201ENST00000623391 KIF16BQ96L93 1317 aa11.06□□□□□ -0.64
AP000542.3-201ENST00000623391 NAIPQ13075 1403 aa11.06□□□□□ -0.64
AP000542.3-201ENST00000623391 IPO9Q96P70 1041 aaKnown RBP11.06□□□□□ -0.64
AP000542.3-201ENST00000623391 GNAI1P63096 354 aa11.05□□□□□ -0.64
AP000542.3-201ENST00000623391 WDR97A6NE52 1622 aa11.04□□□□□ -0.64
AP000542.3-201ENST00000623391 KIF21AQ7Z4S6 1674 aa11.04□□□□□ -0.64
AP000542.3-201ENST00000623391 LRRFIP1Q32MZ4 808 aaKnown RBP11.04□□□□□ -0.64
AP000542.3-201ENST00000623391 ERBINQ96RT1 1412 aa11.04□□□□□ -0.64
AP000542.3-201ENST00000623391 FAM161AQ3B820 660 aa11.04□□□□□ -0.64
AP000542.3-201ENST00000623391 KIF3AQ9Y496 699 aa11.03□□□□□ -0.64
AP000542.3-201ENST00000623391 ST18O60284 1047 aa11.03□□□□□ -0.64
AP000542.3-201ENST00000623391 NAP1L2Q9ULW6 460 aaPredicted RBP11.03□□□□□ -0.64
AP000542.3-201ENST00000623391 RAPGEF6Q8TEU7 1601 aa11.03□□□□□ -0.64
AP000542.3-201ENST00000623391 TAF7LQ5H9L4 462 aa11.03□□□□□ -0.64
AP000542.3-201ENST00000623391 CCDC34Q96HJ3 373 aa11.02□□□□□ -0.64
AP000542.3-201ENST00000623391 GORABQ5T7V8 394 aa11.02□□□□□ -0.64
AP000542.3-201ENST00000623391 GNL2Q13823 731 aaKnown RBP11.02□□□□□ -0.65
AP000542.3-201ENST00000623391 ABCC5O15440 1437 aa11.01□□□□□ -0.65
AP000542.3-201ENST00000623391 PPP6R1Q9UPN7 881 aa11.01□□□□□ -0.65
AP000542.3-201ENST00000623391 DNTTIP2Q5QJE6 756 aaKnown RBP11.01□□□□□ -0.65
AP000542.3-201ENST00000623391 ATAD2Q6PL18 1390 aa11.01□□□□□ -0.65
AP000542.3-201ENST00000623391 FAM135AQ9P2D6 1515 aa11.01□□□□□ -0.65
AP000542.3-201ENST00000623391 DDX58O95786 925 aaKnown RBP11.01□□□□□ -0.65
AP000542.3-201ENST00000623391 CT47B1P0C2W7 299 aaPredicted RBP11.01□□□□□ -0.65
AP000542.3-201ENST00000623391 CHAF1AQ13111 956 aaPredicted RBP11.01□□□□□ -0.65
AP000542.3-201ENST00000623391 USP35Q9P2H5 1018 aa11.01□□□□□ -0.65
AP000542.3-201ENST00000623391 TEFQ10587 303 aa11□□□□□ -0.65
AP000542.3-201ENST00000623391 ARHGEF11O15085 1522 aa11□□□□□ -0.65
AP000542.3-201ENST00000623391 AFAP1Q8N556 730 aa11□□□□□ -0.65
AP000542.3-201ENST00000623391 ZNF692Q9BU19 519 aaPredicted RBP11□□□□□ -0.65
AP000542.3-201ENST00000623391 TPM4P67936 248 aa11□□□□□ -0.65
AP000542.3-201ENST00000623391 RIPK4P57078 832 aa11□□□□□ -0.65
AP000542.3-201ENST00000623391 NEXNQ0ZGT2 675 aa11□□□□□ -0.65
AP000542.3-201ENST00000623391 HSP90AB4PQ58FF6 505 aa11□□□□□ -0.65
AP000542.3-201ENST00000623391 DZIP1LQ8IYY4 767 aaKnown RBP11□□□□□ -0.65
AP000542.3-201ENST00000623391 SMG6Q86US8 1419 aaKnown RBP10.99□□□□□ -0.65
AP000542.3-201ENST00000623391 TRIM6-TRIM34B2RNG4 842 aa10.99□□□□□ -0.65
AP000542.3-201ENST00000623391 SLC4A10Q6U841 1118 aa10.99□□□□□ -0.65
AP000542.3-201ENST00000623391 WWC1Q8IX03 1113 aa10.99□□□□□ -0.65
AP000542.3-201ENST00000623391 APAF1O14727 1248 aa10.99□□□□□ -0.65
AP000542.3-201ENST00000623391 PHF14O94880 888 aa10.99□□□□□ -0.65
AP000542.3-201ENST00000623391 MFAP1P55081 439 aaKnown RBP10.99□□□□□ -0.65
AP000542.3-201ENST00000623391 DDX11L8A8MPP1 907 aa10.99□□□□□ -0.65
AP000542.3-201ENST00000623391 PSME1Q06323 249 aa10.99□□□□□ -0.65
AP000542.3-201ENST00000623391 TTC5Q8N0Z6 440 aa10.99□□□□□ -0.65
AP000542.3-201ENST00000623391 GPRASP1Q5JY77 1395 aa10.99□□□□□ -0.65
AP000542.3-201ENST00000623391 RUFY2Q8WXA3 655 aa10.98□□□□□ -0.65
AP000542.3-201ENST00000623391 CFAP43Q8NDM7 1665 aa10.98□□□□□ -0.65
AP000542.3-201ENST00000623391 ADAMTS12P58397 1594 aa10.98□□□□□ -0.65
AP000542.3-201ENST00000623391 MSNP26038 577 aaKnown RBP10.98□□□□□ -0.65
AP000542.3-201ENST00000623391 UGGT2Q9NYU1 1516 aa10.98□□□□□ -0.65
AP000542.3-201ENST00000623391 CRBNQ96SW2 442 aa10.98□□□□□ -0.65
AP000542.3-201ENST00000623391 TSHZ2Q9NRE2 1034 aa10.98□□□□□ -0.65
AP000542.3-201ENST00000623391 ADGRL1O94910 1474 aa10.98□□□□□ -0.65
AP000542.3-201ENST00000623391 THEMISQ8N1K5 641 aaPredicted RBP10.97□□□□□ -0.65
AP000542.3-201ENST00000623391 APBB1O00213 710 aa10.97□□□□□ -0.65
AP000542.3-201ENST00000623391 RRP7AQ9Y3A4 280 aaKnown RBP10.97□□□□□ -0.65
AP000542.3-201ENST00000623391 GAS2L2Q8NHY3 880 aa10.97□□□□□ -0.65
AP000542.3-201ENST00000623391 CD109Q6YHK3 1445 aa10.96□□□□□ -0.65
AP000542.3-201ENST00000623391 PLB1Q6P1J6 1458 aa10.96□□□□□ -0.65
AP000542.3-201ENST00000623391 PPP2R1AP30153 589 aa10.96□□□□□ -0.65
AP000542.3-201ENST00000623391 SKOR2Q2VWA4 1001 aaPredicted RBP10.96□□□□□ -0.65
AP000542.3-201ENST00000623391 LTV1Q96GA3 475 aaPredicted RBP10.96□□□□□ -0.65
AP000542.3-201ENST00000623391 ATF3P18847 181 aa10.96□□□□□ -0.65
AP000542.3-201ENST00000623391 REC8O95072 547 aa10.96□□□□□ -0.66
AP000542.3-201ENST00000623391 EVA1CP58658 441 aa10.96□□□□□ -0.66
AP000542.3-201ENST00000623391 CLUAP1Q96AJ1 413 aa10.96□□□□□ -0.66
AP000542.3-201ENST00000623391 CHMP3Q9Y3E7 222 aa10.96□□□□□ -0.66
AP000542.3-201ENST00000623391 ATP6V1DQ9Y5K8 247 aa10.95□□□□□ -0.66
AP000542.3-201ENST00000623391 CCDC9Q9Y3X0 531 aaKnown RBP10.95□□□□□ -0.66
AP000542.3-201ENST00000623391 FANCIQ9NVI1 1328 aa10.94□□□□□ -0.66
AP000542.3-201ENST00000623391 EXOC6Q8TAG9 804 aa10.94□□□□□ -0.66
AP000542.3-201ENST00000623391 HSP90B1P14625 803 aaKnown RBP10.94□□□□□ -0.66
AP000542.3-201ENST00000623391 PDE4AP27815 886 aa10.94□□□□□ -0.66
AP000542.3-201ENST00000623391 DUOX2Q9NRD8 1548 aa10.94□□□□□ -0.66
AP000542.3-201ENST00000623391 TCOF1Q13428 1488 aaKnown RBP10.94□□□□□ -0.66
AP000542.3-201ENST00000623391 CFAP70Q5T0N1 1121 aa10.93□□□□□ -0.66
AP000542.3-201ENST00000623391 NCOA1Q15788 1441 aa10.93□□□□□ -0.66
AP000542.3-201ENST00000623391 WDR63Q8IWG1 891 aa10.93□□□□□ -0.66
AP000542.3-201ENST00000623391 RTEL1-TNFRSF6BF6WH68 1400 aa10.93□□□□□ -0.66
AP000542.3-201ENST00000623391 ANKRD45Q5TZF3 282 aa10.93□□□□□ -0.66
AP000542.3-201ENST00000623391 CABP2Q9NPB3 220 aa10.93□□□□□ -0.66
AP000542.3-201ENST00000623391 PNISRQ8TF01 805 aaKnown RBP10.93□□□□□ -0.66
AP000542.3-201ENST00000623391 KIAA0556O60303 1618 aa10.93□□□□□ -0.66
AP000542.3-201ENST00000623391 PLCB2Q00722 1185 aa10.92□□□□□ -0.66
AP000542.3-201ENST00000623391 ZNF330Q9Y3S2 320 aaPredicted RBP10.92□□□□□ -0.66
AP000542.3-201ENST00000623391 GOLGA6L3A6NEY3 463 aa10.92□□□□□ -0.66
AP000542.3-201ENST00000623391 RPRD2Q5VT52 1461 aaKnown RBP10.92□□□□□ -0.66
AP000542.3-201ENST00000623391 DRC7Q8IY82 874 aa10.92□□□□□ -0.66
AP000542.3-201ENST00000623391 TSPYL4Q9UJ04 414 aa10.92□□□□□ -0.66
AP000542.3-201ENST00000623391 DENND4BO75064 1496 aaPredicted RBP10.91□□□□□ -0.66
AP000542.3-201ENST00000623391 KIAA2012Q0VF49 1180 aa10.91□□□□□ -0.66
AP000542.3-201ENST00000623391 RAPGEF4Q8WZA2 1011 aa10.91□□□□□ -0.66
AP000542.3-201ENST00000623391 SHANK2Q9UPX8 1470 aa10.91□□□□□ -0.66
AP000542.3-201ENST00000623391 PDE3AQ14432 1141 aa10.91□□□□□ -0.66
AP000542.3-201ENST00000623391 TXNDC2Q86VQ3 553 aa10.91□□□□□ -0.66
AP000542.3-201ENST00000623391 NSD2O96028 1365 aa10.91□□□□□ -0.66
AP000542.3-201ENST00000623391 ZNF428Q96B54 188 aa10.91□□□□□ -0.66
AP000542.3-201ENST00000623391 NUP160Q12769 1436 aa10.91□□□□□ -0.66
AP000542.3-201ENST00000623391 NUTM2FA1L443 756 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms