RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 BRINP3Q76B58 766 aa11.25□□□□□ -0.61
CDKL5-204ENST00000623364 GJD4Q96KN9 370 aaPredicted RBP11.25□□□□□ -0.61
CDKL5-204ENST00000623364 PNPLA6Q8IY17 1366 aa11.25□□□□□ -0.61
CDKL5-204ENST00000623364 SLIT1O75093 1534 aa11.25□□□□□ -0.61
CDKL5-204ENST00000623364 TNS4Q8IZW8 715 aa11.23□□□□□ -0.61
CDKL5-204ENST00000623364 SLC26A8Q96RN1 970 aa11.23□□□□□ -0.61
CDKL5-204ENST00000623364 SPON1Q9HCB6 807 aa11.23□□□□□ -0.61
CDKL5-204ENST00000623364 CLIP1P30622 1438 aa11.23□□□□□ -0.61
CDKL5-204ENST00000623364 RALGAPBQ86X10 1494 aa11.23□□□□□ -0.61
CDKL5-204ENST00000623364 UBR1Q8IWV7 1749 aa11.23□□□□□ -0.61
CDKL5-204ENST00000623364 EN1Q05925 392 aaPredicted RBP11.22□□□□□ -0.61
CDKL5-204ENST00000623364 SPHKAPQ2M3C7 1700 aa11.21□□□□□ -0.61
CDKL5-204ENST00000623364 PREX2Q70Z35 1606 aa11.21□□□□□ -0.61
CDKL5-204ENST00000623364 COL13A1Q5TAT6 717 aaPredicted RBP11.21□□□□□ -0.61
CDKL5-204ENST00000623364 TROQ12816 1431 aaPredicted RBP11.2□□□□□ -0.62
CDKL5-204ENST00000623364 NCOA3Q9Y6Q9 1424 aa11.2□□□□□ -0.62
CDKL5-204ENST00000623364 HSPA6P17066 643 aa11.2□□□□□ -0.62
CDKL5-204ENST00000623364 MROH1Q8NDA8 1641 aa11.2□□□□□ -0.62
CDKL5-204ENST00000623364 INO80Q9ULG1 1556 aaPredicted RBP11.2□□□□□ -0.62
CDKL5-204ENST00000623364 C19orf44Q9H6X5 657 aa11.19□□□□□ -0.62
CDKL5-204ENST00000623364 MAST1Q9Y2H9 1570 aa11.19□□□□□ -0.62
CDKL5-204ENST00000623364 PTCH1Q13635 1447 aa11.18□□□□□ -0.62
CDKL5-204ENST00000623364 KIF3BO15066 747 aa11.18□□□□□ -0.62
CDKL5-204ENST00000623364 RANGAP1P46060 587 aaPredicted RBP11.18□□□□□ -0.62
CDKL5-204ENST00000623364 ZNF777Q9ULD5 760 aaPredicted RBP11.18□□□□□ -0.62
CDKL5-204ENST00000623364 ATP1B4Q9UN42 357 aaPredicted RBP11.18□□□□□ -0.62
CDKL5-204ENST00000623364 BRWD3Q6RI45 1802 aa11.17□□□□□ -0.62
CDKL5-204ENST00000623364 HNRNPMP52272 730 aaKnown RBP eCLIP11.17□□□□□ -0.62
CDKL5-204ENST00000623364 SYCP2Q9BX26 1530 aa11.17□□□□□ -0.62
CDKL5-204ENST00000623364 CAMSAP2Q08AD1 1489 aa11.17□□□□□ -0.62
CDKL5-204ENST00000623364 PRXQ9BXM0 1461 aa11.17□□□□□ -0.62
CDKL5-204ENST00000623364 ASXL1Q8IXJ9 1541 aa11.16□□□□□ -0.62
CDKL5-204ENST00000623364 KCNQ2O43526 872 aa11.16□□□□□ -0.62
CDKL5-204ENST00000623364 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.15□□□□□ -0.62
CDKL5-204ENST00000623364 KRT27Q7Z3Y8 459 aa11.15□□□□□ -0.62
CDKL5-204ENST00000623364 SEPT12Q8IYM1 358 aa11.15□□□□□ -0.62
CDKL5-204ENST00000623364 TMEM2Q9UHN6 1383 aa11.15□□□□□ -0.63
CDKL5-204ENST00000623364 UTRNP46939 3433 aa11.15□□□□□ -0.63
CDKL5-204ENST00000623364 ARHGAP35Q9NRY4 1499 aa11.14□□□□□ -0.63
CDKL5-204ENST00000623364 BCANQ96GW7 911 aa11.14□□□□□ -0.63
CDKL5-204ENST00000623364 DHX29Q7Z478 1369 aaKnown RBP11.14□□□□□ -0.63
CDKL5-204ENST00000623364 GPATCH8Q9UKJ3 1502 aaKnown RBP11.14□□□□□ -0.63
CDKL5-204ENST00000623364 ERVK-7P63135 1459 aa11.13□□□□□ -0.63
CDKL5-204ENST00000623364 SUPT5HO00267 1087 aaKnown RBP11.13□□□□□ -0.63
CDKL5-204ENST00000623364 TET3O43151 1660 aa11.13□□□□□ -0.63
CDKL5-204ENST00000623364 FAM83GA6ND36 823 aa11.12□□□□□ -0.63
CDKL5-204ENST00000623364 MAPK8IP2Q13387 824 aaPredicted RBP11.11□□□□□ -0.63
CDKL5-204ENST00000623364 STAG3Q9UJ98 1225 aa11.11□□□□□ -0.63
CDKL5-204ENST00000623364 EZH2Q15910 746 aaKnown RBP11.1□□□□□ -0.63
CDKL5-204ENST00000623364 DISP2A7MBM2 1401 aa11.09□□□□□ -0.63
CDKL5-204ENST00000623364 GLI3P10071 1580 aa11.09□□□□□ -0.63
CDKL5-204ENST00000623364 PPP1R15AO75807 674 aaPredicted RBP11.09□□□□□ -0.63
CDKL5-204ENST00000623364 NBPF8Q3BBV2 869 aa11.09□□□□□ -0.63
CDKL5-204ENST00000623364 NBPF14Q5TI25 921 aa11.09□□□□□ -0.63
CDKL5-204ENST00000623364 DDX17Q92841 729 aaKnown RBP11.09□□□□□ -0.63
CDKL5-204ENST00000623364 RGPD1P0DJD0 1748 aa11.09□□□□□ -0.63
CDKL5-204ENST00000623364 KIAA1107Q9UPP5 1409 aa11.09□□□□□ -0.63
CDKL5-204ENST00000623364 CHD2O14647 1828 aaKnown RBP11.07□□□□□ -0.64
CDKL5-204ENST00000623364 PLEKHH2Q8IVE3 1493 aa11.07□□□□□ -0.64
CDKL5-204ENST00000623364 UNC5CLQ8IV45 518 aa11.07□□□□□ -0.64
CDKL5-204ENST00000623364 CDC42BPAQ5VT25 1732 aa11.06□□□□□ -0.64
CDKL5-204ENST00000623364 CAMKK2Q96RR4 588 aa11.05□□□□□ -0.64
CDKL5-204ENST00000623364 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.05□□□□□ -0.64
CDKL5-204ENST00000623364 WWC3Q9ULE0 1092 aa11.05□□□□□ -0.64
CDKL5-204ENST00000623364 CFAP65Q6ZU64 1925 aaKnown RBP11.05□□□□□ -0.64
CDKL5-204ENST00000623364 PARD3Q8TEW0 1356 aa11.04□□□□□ -0.64
CDKL5-204ENST00000623364 DCCP43146 1447 aa11.04□□□□□ -0.64
CDKL5-204ENST00000623364 A0A0G2JS52 829 aa11.03□□□□□ -0.64
CDKL5-204ENST00000623364 ONECUT3O60422 494 aaPredicted RBP11.03□□□□□ -0.64
CDKL5-204ENST00000623364 APLP1P51693 650 aa11.03□□□□□ -0.64
CDKL5-204ENST00000623364 MYT1Q01538 1121 aa11.03□□□□□ -0.64
CDKL5-204ENST00000623364 SYT17Q9BSW7 474 aa11.02□□□□□ -0.65
CDKL5-204ENST00000623364 AATKQ6ZMQ8 1374 aa11.02□□□□□ -0.65
CDKL5-204ENST00000623364 MST1RQ04912 1400 aa11.01□□□□□ -0.65
CDKL5-204ENST00000623364 EFCAB6Q5THR3 1501 aa11.01□□□□□ -0.65
CDKL5-204ENST00000623364 SHANK3Q9BYB0 1731 aa11.01□□□□□ -0.65
CDKL5-204ENST00000623364 ADGRB2O60241 1585 aa11□□□□□ -0.65
CDKL5-204ENST00000623364 PIK3C2BO00750 1634 aa11□□□□□ -0.65
CDKL5-204ENST00000623364 DNAJC5GQ8N7S2 189 aa11□□□□□ -0.65
CDKL5-204ENST00000623364 MARF1Q9Y4F3 1742 aaKnown RBP11□□□□□ -0.65
CDKL5-204ENST00000623364 NRKQ7Z2Y5 1582 aa10.99□□□□□ -0.65
CDKL5-204ENST00000623364 GPR162Q16538 588 aa10.99□□□□□ -0.65
CDKL5-204ENST00000623364 FHDC1Q9C0D6 1143 aaPredicted RBP10.99□□□□□ -0.65
CDKL5-204ENST00000623364 CCDC9Q9Y3X0 531 aaKnown RBP10.99□□□□□ -0.65
CDKL5-204ENST00000623364 MYOM2P54296 1465 aa10.98□□□□□ -0.65
CDKL5-204ENST00000623364 COL22A1Q8NFW1 1626 aaPredicted RBP10.98□□□□□ -0.65
CDKL5-204ENST00000623364 TNS1Q9HBL0 1735 aaKnown RBP10.98□□□□□ -0.65
CDKL5-204ENST00000623364 VPS72Q15906 364 aa10.97□□□□□ -0.65
CDKL5-204ENST00000623364 GPBP1L1Q9HC44 474 aaPredicted RBP10.97□□□□□ -0.65
CDKL5-204ENST00000623364 CFDP1Q9UEE9 299 aaPredicted RBP10.97□□□□□ -0.65
CDKL5-204ENST00000623364 SOS2Q07890 1332 aaPredicted RBP10.97□□□□□ -0.65
CDKL5-204ENST00000623364 FMN1Q68DA7 1419 aa10.97□□□□□ -0.65
CDKL5-204ENST00000623364 SLIT2O94813 1529 aa10.96□□□□□ -0.65
CDKL5-204ENST00000623364 DLC1Q96QB1 1528 aa10.96□□□□□ -0.65
CDKL5-204ENST00000623364 APBA3O96018 575 aa10.96□□□□□ -0.65
CDKL5-204ENST00000623364 TBX22Q9Y458 520 aa10.96□□□□□ -0.65
CDKL5-204ENST00000623364 MYOM1P52179 1685 aa10.95□□□□□ -0.66
CDKL5-204ENST00000623364 RPRD2Q5VT52 1461 aaKnown RBP10.94□□□□□ -0.66
CDKL5-204ENST00000623364 FAM182BQ5T319 152 aa10.94□□□□□ -0.66
CDKL5-204ENST00000623364 PLEKHG1Q9ULL1 1385 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms