RNA–Protein interactions for RNA: ENST00000623321.3

ATRX-211, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 1,860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-211ENST00000623321 TMEM131LA2VDJ0 1609 aa21.04■□□□□ 0.96
ATRX-211ENST00000623321 GPRASP1Q5JY77 1395 aa21.04■□□□□ 0.96
ATRX-211ENST00000623321 USP47Q96K76 1375 aa21.04■□□□□ 0.96
ATRX-211ENST00000623321 FER1L4A9Z1Z3 1794 aa21.03■□□□□ 0.96
ATRX-211ENST00000623321 NBPF1Q3BBV0 1214 aa21.03■□□□□ 0.96
ATRX-211ENST00000623321 PPLO60437 1756 aa21.03■□□□□ 0.96
ATRX-211ENST00000623321 CCER2I3L3R5 266 aa21.03■□□□□ 0.96
ATRX-211ENST00000623321 ADGRF5Q8IZF2 1346 aa21.02■□□□□ 0.96
ATRX-211ENST00000623321 TNRQ92752 1358 aa21.01■□□□□ 0.95
ATRX-211ENST00000623321 NRXN1Q9ULB1 1477 aa21.01■□□□□ 0.95
ATRX-211ENST00000623321 STAG3Q9UJ98 1225 aa21.01■□□□□ 0.95
ATRX-211ENST00000623321 LAMC1P11047 1609 aa21■□□□□ 0.95
ATRX-211ENST00000623321 MYT1Q01538 1121 aa21■□□□□ 0.95
ATRX-211ENST00000623321 VGFO15240 615 aaPredicted RBP20.99■□□□□ 0.95
ATRX-211ENST00000623321 NEXMIFQ5QGS0 1516 aa20.99■□□□□ 0.95
ATRX-211ENST00000623321 MYO5BQ9ULV0 1848 aa20.98■□□□□ 0.95
ATRX-211ENST00000623321 KIAA1210Q9ULL0 1709 aa20.98■□□□□ 0.95
ATRX-211ENST00000623321 C3P01024 1663 aa20.98■□□□□ 0.95
ATRX-211ENST00000623321 CEBPAP49715 358 aaPredicted RBP20.98■□□□□ 0.95
ATRX-211ENST00000623321 ZFYVE9O95405 1425 aa20.96■□□□□ 0.95
ATRX-211ENST00000623321 A2ML1A8K2U0 1454 aa20.95■□□□□ 0.95
ATRX-211ENST00000623321 CFAP70Q5T0N1 1121 aa20.94■□□□□ 0.94
ATRX-211ENST00000623321 PIK3C2GO75747 1445 aa20.94■□□□□ 0.94
ATRX-211ENST00000623321 ANP32CO43423 234 aa20.94■□□□□ 0.94
ATRX-211ENST00000623321 ADAMTSL3P82987 1691 aa20.93■□□□□ 0.94
ATRX-211ENST00000623321 ST20-MTHFSA0A0A6YYL1 179 aa20.92■□□□□ 0.94
ATRX-211ENST00000623321 C14orf93Q9H972 538 aaKnown RBP20.92■□□□□ 0.94
ATRX-211ENST00000623321 NLRP1Q9C000 1473 aa20.92■□□□□ 0.94
ATRX-211ENST00000623321 NUTM2DQ5VT03 806 aaPredicted RBP20.92■□□□□ 0.94
ATRX-211ENST00000623321 KDM5AP29375 1690 aaKnown RBP20.91■□□□□ 0.94
ATRX-211ENST00000623321 WASHC2AQ641Q2 1341 aa20.9■□□□□ 0.94
ATRX-211ENST00000623321 C11orf95C9JLR9 678 aaPredicted RBP20.9■□□□□ 0.94
ATRX-211ENST00000623321 RIMS1Q86UR5 1692 aaKnown RBP20.9■□□□□ 0.94
ATRX-211ENST00000623321 PLPPR3Q6T4P5 718 aa20.88■□□□□ 0.93
ATRX-211ENST00000623321 SCAF11Q99590 1463 aaKnown RBP20.88■□□□□ 0.93
ATRX-211ENST00000623321 RIMS2Q9UQ26 1411 aa20.87■□□□□ 0.93
ATRX-211ENST00000623321 SETBP1Q9Y6X0 1596 aa20.87■□□□□ 0.93
ATRX-211ENST00000623321 CCDC7Q96M83 1385 aa20.87■□□□□ 0.93
ATRX-211ENST00000623321 IQGAP1P46940 1657 aa20.86■□□□□ 0.93
ATRX-211ENST00000623321 UBR1Q8IWV7 1749 aa20.86■□□□□ 0.93
ATRX-211ENST00000623321 HDGFP51858 240 aaKnown RBP20.86■□□□□ 0.93
ATRX-211ENST00000623321 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.86■□□□□ 0.93
ATRX-211ENST00000623321 POLR1AO95602 1720 aaPredicted RBP20.85■□□□□ 0.93
ATRX-211ENST00000623321 KIF7Q2M1P5 1343 aa20.85■□□□□ 0.93
ATRX-211ENST00000623321 EIF3AQ14152 1382 aaKnown RBP20.83■□□□□ 0.92
ATRX-211ENST00000623321 TMEM2Q9UHN6 1383 aa20.82■□□□□ 0.92
ATRX-211ENST00000623321 ADGRB1O14514 1584 aa20.82■□□□□ 0.92
ATRX-211ENST00000623321 TESK2Q96S53 571 aa20.81■□□□□ 0.92
ATRX-211ENST00000623321 TMEM132EQ6IEE7 984 aa20.79■□□□□ 0.92
ATRX-211ENST00000623321 MYO3AQ8NEV4 1616 aa20.79■□□□□ 0.92
ATRX-211ENST00000623321 THEMISQ8N1K5 641 aaPredicted RBP20.77■□□□□ 0.92
ATRX-211ENST00000623321 TSHZ2Q9NRE2 1034 aa20.77■□□□□ 0.92
ATRX-211ENST00000623321 ALKQ9UM73 1620 aa20.77■□□□□ 0.91
ATRX-211ENST00000623321 TMF1P82094 1093 aa20.76■□□□□ 0.91
ATRX-211ENST00000623321 SLC24A1O60721 1099 aa20.75■□□□□ 0.91
ATRX-211ENST00000623321 SENP3Q9H4L4 574 aaPredicted RBP20.75■□□□□ 0.91
ATRX-211ENST00000623321 TRAK1Q9UPV9 953 aa20.75■□□□□ 0.91
ATRX-211ENST00000623321 PTPRMP28827 1452 aa20.74■□□□□ 0.91
ATRX-211ENST00000623321 SLIT1O75093 1534 aa20.73■□□□□ 0.91
ATRX-211ENST00000623321 FKBP8Q14318 412 aa20.73■□□□□ 0.91
ATRX-211ENST00000623321 POLR3GLQ9BT43 218 aa20.73■□□□□ 0.91
ATRX-211ENST00000623321 EID1Q9Y6B2 187 aa20.73■□□□□ 0.91
ATRX-211ENST00000623321 ARHGAP23Q9P227 1491 aa20.73■□□□□ 0.91
ATRX-211ENST00000623321 TXNDC2Q86VQ3 553 aa20.73■□□□□ 0.91
ATRX-211ENST00000623321 CEP170BQ9Y4F5 1589 aaPredicted RBP20.73■□□□□ 0.91
ATRX-211ENST00000623321 SETD1BQ9UPS6 1966 aaKnown RBP20.72■□□□□ 0.91
ATRX-211ENST00000623321 ASXL1Q8IXJ9 1541 aa20.72■□□□□ 0.91
ATRX-211ENST00000623321 DISP3Q9P2K9 1392 aa20.71■□□□□ 0.91
ATRX-211ENST00000623321 LTKP29376 864 aa20.71■□□□□ 0.91
ATRX-211ENST00000623321 NEFLP07196 543 aa20.71■□□□□ 0.91
ATRX-211ENST00000623321 CENPJQ9HC77 1338 aaPredicted RBP20.7■□□□□ 0.9
ATRX-211ENST00000623321 NRXN3Q9Y4C0 1643 aa20.7■□□□□ 0.9
ATRX-211ENST00000623321 SBNO2Q9Y2G9 1366 aa20.69■□□□□ 0.9
ATRX-211ENST00000623321 PLEKHG1Q9ULL1 1385 aa20.69■□□□□ 0.9
ATRX-211ENST00000623321 YTHDC2Q9H6S0 1430 aaKnown RBP20.69■□□□□ 0.9
ATRX-211ENST00000623321 CDCA8Q53HL2 280 aa20.69■□□□□ 0.9
ATRX-211ENST00000623321 BCANQ96GW7 911 aa20.68■□□□□ 0.9
ATRX-211ENST00000623321 SETD1AO15047 1707 aaKnown RBP20.68■□□□□ 0.9
ATRX-211ENST00000623321 ZNF142P52746 1687 aaPredicted RBP20.67■□□□□ 0.9
ATRX-211ENST00000623321 STK26Q9P289 416 aa20.67■□□□□ 0.9
ATRX-211ENST00000623321 ARHGEF28Q8N1W1 1705 aaKnown RBP20.66■□□□□ 0.9
ATRX-211ENST00000623321 LRPPRCP42704 1394 aaKnown RBP20.64■□□□□ 0.89
ATRX-211ENST00000623321 ADAMTS13Q76LX8 1427 aa20.64■□□□□ 0.89
ATRX-211ENST00000623321 QRICH2Q9H0J4 1663 aa20.63■□□□□ 0.89
ATRX-211ENST00000623321 METP08581 1390 aa20.63■□□□□ 0.89
ATRX-211ENST00000623321 ABCC11Q96J66 1382 aa20.62■□□□□ 0.89
ATRX-211ENST00000623321 DLC1Q96QB1 1528 aa20.6■□□□□ 0.89
ATRX-211ENST00000623321 MED14O60244 1454 aa20.6■□□□□ 0.89
ATRX-211ENST00000623321 ANKLE2Q86XL3 938 aa20.6■□□□□ 0.89
ATRX-211ENST00000623321 PRAM1Q96QH2 718 aa20.6■□□□□ 0.89
ATRX-211ENST00000623321 POGKQ9P215 609 aa20.59■□□□□ 0.89
ATRX-211ENST00000623321 TBX22Q9Y458 520 aa20.58■□□□□ 0.89
ATRX-211ENST00000623321 SIRT1Q96EB6 747 aa20.57■□□□□ 0.88
ATRX-211ENST00000623321 SLC26A8Q96RN1 970 aa20.57■□□□□ 0.88
ATRX-211ENST00000623321 KDM4FA0A1W2PPD8 638 aa20.56■□□□□ 0.88
ATRX-211ENST00000623321 EVC2Q86UK5 1308 aa20.55■□□□□ 0.88
ATRX-211ENST00000623321 TECPR2O15040 1411 aa20.55■□□□□ 0.88
ATRX-211ENST00000623321 HNRNPUQ00839 825 aaKnown RBP eCLIP20.55■□□□□ 0.88
ATRX-211ENST00000623321 SAFB2Q14151 953 aaKnown RBP eCLIP20.55■□□□□ 0.88
ATRX-211ENST00000623321 PUS7Q96PZ0 661 aaKnown RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms