RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 NBPF26B4DH59 902 aa8.04□□□□□ -1.12
ATRX-209ENST00000623242 STAC3Q96MF2 364 aa8.04□□□□□ -1.12
ATRX-209ENST00000623242 KIAA1468Q9P260 1216 aa8.04□□□□□ -1.12
ATRX-209ENST00000623242 PACS2Q86VP3 889 aa8.03□□□□□ -1.12
ATRX-209ENST00000623242 SLC4A5Q9BY07 1137 aa8.03□□□□□ -1.12
ATRX-209ENST00000623242 HRO43593 1189 aa8.02□□□□□ -1.13
ATRX-209ENST00000623242 DNAJB2P25686 324 aa8.01□□□□□ -1.13
ATRX-209ENST00000623242 DAXXQ9UER7 740 aaPredicted RBP8.01□□□□□ -1.13
ATRX-209ENST00000623242 VPS9D1Q9Y2B5 631 aa8.01□□□□□ -1.13
ATRX-209ENST00000623242 BEGAINQ9BUH8 593 aa8□□□□□ -1.13
ATRX-209ENST00000623242 TMEM134Q9H6X4 195 aa8□□□□□ -1.13
ATRX-209ENST00000623242 SEPT9Q9UHD8 586 aaPredicted RBP8□□□□□ -1.13
ATRX-209ENST00000623242 RABGEF1Q9UJ41 708 aa8□□□□□ -1.13
ATRX-209ENST00000623242 TIMELESSQ9UNS1 1208 aa7.99□□□□□ -1.13
ATRX-209ENST00000623242 BHMG1C9JSJ3 638 aaPredicted RBP7.96□□□□□ -1.14
ATRX-209ENST00000623242 CD46P15529 392 aa7.96□□□□□ -1.14
ATRX-209ENST00000623242 GOPCQ9HD26 462 aa7.96□□□□□ -1.14
ATRX-209ENST00000623242 SH3D19Q5HYK7 790 aa7.95□□□□□ -1.14
ATRX-209ENST00000623242 DDX11L8A8MPP1 907 aa7.94□□□□□ -1.14
ATRX-209ENST00000623242 SWT1Q5T5J6 900 aaKnown RBP7.94□□□□□ -1.14
ATRX-209ENST00000623242 KCTD12Q96CX2 325 aaKnown RBP7.94□□□□□ -1.14
ATRX-209ENST00000623242 SLC10A3P09131 477 aa7.93□□□□□ -1.14
ATRX-209ENST00000623242 FAM98CQ17RN3 349 aaKnown RBP7.93□□□□□ -1.14
ATRX-209ENST00000623242 MYSM1Q5VVJ2 828 aa7.93□□□□□ -1.14
ATRX-209ENST00000623242 TBC1D2Q9BYX2 928 aa7.93□□□□□ -1.14
ATRX-209ENST00000623242 HCSTQ9UBK5 93 aa7.93□□□□□ -1.14
ATRX-209ENST00000623242 GOLGA8CPA6NN73 597 aa7.92□□□□□ -1.14
ATRX-209ENST00000623242 SKIV2LQ15477 1246 aaKnown RBP7.92□□□□□ -1.14
ATRX-209ENST00000623242 SULF1Q8IWU6 871 aa7.92□□□□□ -1.14
ATRX-209ENST00000623242 PROCA1Q8NCQ7 364 aaPredicted RBP7.92□□□□□ -1.14
ATRX-209ENST00000623242 SPIRE2Q8WWL2 714 aa7.92□□□□□ -1.14
ATRX-209ENST00000623242 POLR3EQ9NVU0 708 aa7.91□□□□□ -1.14
ATRX-209ENST00000623242 SAMD7Q7Z3H4 446 aa7.9□□□□□ -1.14
ATRX-209ENST00000623242 LAPTM4BQ86VI4 370 aa7.9□□□□□ -1.14
ATRX-209ENST00000623242 MRPL50Q8N5N7 158 aaKnown RBP7.9□□□□□ -1.14
ATRX-209ENST00000623242 RSPH6AQ9H0K4 717 aa7.9□□□□□ -1.14
ATRX-209ENST00000623242 FBXO31Q5XUX0 539 aaPredicted RBP7.89□□□□□ -1.15
ATRX-209ENST00000623242 RDH13Q8NBN7 331 aa7.89□□□□□ -1.15
ATRX-209ENST00000623242 PCMTD1Q96MG8 357 aaPredicted RBP7.89□□□□□ -1.15
ATRX-209ENST00000623242 NBPF3Q9H094 633 aa7.89□□□□□ -1.15
ATRX-209ENST00000623242 LIMD1Q9UGP4 676 aa7.89□□□□□ -1.15
ATRX-209ENST00000623242 GCGRP47871 477 aa7.88□□□□□ -1.15
ATRX-209ENST00000623242 ZFRQ96KR1 1074 aaKnown RBP7.88□□□□□ -1.15
ATRX-209ENST00000623242 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.88□□□□□ -1.15
ATRX-209ENST00000623242 MOXD2PA6NHM9 499 aa7.87□□□□□ -1.15
ATRX-209ENST00000623242 CLK2P49760 499 aaKnown RBP7.87□□□□□ -1.15
ATRX-209ENST00000623242 PTPN5P54829 565 aa7.87□□□□□ -1.15
ATRX-209ENST00000623242 NDUFV2P19404 249 aa7.86□□□□□ -1.15
ATRX-209ENST00000623242 SPTLC1O15269 473 aa7.85□□□□□ -1.15
ATRX-209ENST00000623242 RSBN1LQ6PCB5 846 aaPredicted RBP7.85□□□□□ -1.15
ATRX-209ENST00000623242 RIC3Q7Z5B4 369 aa7.85□□□□□ -1.15
ATRX-209ENST00000623242 C14orf37Q86TY3 774 aa7.85□□□□□ -1.15
ATRX-209ENST00000623242 NUTM1Q86Y26 1132 aa7.85□□□□□ -1.15
ATRX-209ENST00000623242 WNT2BQ93097 391 aa7.85□□□□□ -1.15
ATRX-209ENST00000623242 KDM4AO75164 1064 aa7.84□□□□□ -1.15
ATRX-209ENST00000623242 DIXDC1Q155Q3 683 aa7.84□□□□□ -1.15
ATRX-209ENST00000623242 SLF2Q8IX21 1173 aa7.84□□□□□ -1.15
ATRX-209ENST00000623242 HLA-CQ95604 372 aa7.84□□□□□ -1.15
ATRX-209ENST00000623242 HOXA2O43364 376 aa7.83□□□□□ -1.16
ATRX-209ENST00000623242 HDGFP51858 240 aaKnown RBP7.83□□□□□ -1.16
ATRX-209ENST00000623242 PLA2G2EQ9NZK7 142 aa7.83□□□□□ -1.16
ATRX-209ENST00000623242 PCDHB15Q9Y5E8 787 aa7.83□□□□□ -1.16
ATRX-209ENST00000623242 RNF40O75150 1001 aa7.82□□□□□ -1.16
ATRX-209ENST00000623242 CFHP08603 1231 aa7.82□□□□□ -1.16
ATRX-209ENST00000623242 GUCA2AQ02747 115 aa7.82□□□□□ -1.16
ATRX-209ENST00000623242 THSD4Q6ZMP0 1018 aa7.82□□□□□ -1.16
ATRX-209ENST00000623242 QPCTQ16769 361 aa7.81□□□□□ -1.16
ATRX-209ENST00000623242 TUSC1Q2TAM9 212 aa7.81□□□□□ -1.16
ATRX-209ENST00000623242 RSPH4AQ5TD94 716 aa7.81□□□□□ -1.16
ATRX-209ENST00000623242 LRCH3Q96II8 777 aa7.81□□□□□ -1.16
ATRX-209ENST00000623242 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.81□□□□□ -1.16
ATRX-209ENST00000623242 PCDHGC3Q9UN70 934 aa7.81□□□□□ -1.16
ATRX-209ENST00000623242 GJA5P36382 358 aa7.8□□□□□ -1.16
ATRX-209ENST00000623242 BCAMP50895 628 aa7.8□□□□□ -1.16
ATRX-209ENST00000623242 USP46P62068 366 aa7.8□□□□□ -1.16
ATRX-209ENST00000623242 FUT2Q10981 343 aa7.8□□□□□ -1.16
ATRX-209ENST00000623242 PPP2R2DQ66LE6 453 aa7.8□□□□□ -1.16
ATRX-209ENST00000623242 ANKK1Q8NFD2 765 aa7.8□□□□□ -1.16
ATRX-209ENST00000623242 SOWAHBA6NEL2 793 aa7.79□□□□□ -1.16
ATRX-209ENST00000623242 LILRB3O75022 631 aa7.79□□□□□ -1.16
ATRX-209ENST00000623242 RFC5P40937 340 aa7.79□□□□□ -1.16
ATRX-209ENST00000623242 CSPP1Q1MSJ5 1256 aa7.79□□□□□ -1.16
ATRX-209ENST00000623242 ERICH6Q7L0X2 663 aa7.79□□□□□ -1.16
ATRX-209ENST00000623242 ATP1B4Q9UN42 357 aaPredicted RBP7.79□□□□□ -1.16
ATRX-209ENST00000623242 FDX1P10109 184 aa7.78□□□□□ -1.16
ATRX-209ENST00000623242 RTL5Q5HYW3 569 aaPredicted RBP7.78□□□□□ -1.16
ATRX-209ENST00000623242 IFFO2Q5TF58 517 aa7.78□□□□□ -1.16
ATRX-209ENST00000623242 CABLES1Q8TDN4 633 aa7.78□□□□□ -1.16
ATRX-209ENST00000623242 SLC4A3P48751 1232 aa7.77□□□□□ -1.17
ATRX-209ENST00000623242 ACTN4O43707 911 aaKnown RBP7.76□□□□□ -1.17
ATRX-209ENST00000623242 APLP1P51693 650 aa7.76□□□□□ -1.17
ATRX-209ENST00000623242 MCM6Q14566 821 aa7.76□□□□□ -1.17
ATRX-209ENST00000623242 HPS5Q9UPZ3 1129 aa7.76□□□□□ -1.17
ATRX-209ENST00000623242 HRCP23327 699 aa7.75□□□□□ -1.17
ATRX-209ENST00000623242 ATP6V1AP38606 617 aa7.75□□□□□ -1.17
ATRX-209ENST00000623242 FLIIQ13045 1269 aa7.75□□□□□ -1.17
ATRX-209ENST00000623242 PUS10Q3MIT2 529 aaKnown RBP7.75□□□□□ -1.17
ATRX-209ENST00000623242 KMT5BQ4FZB7 885 aa7.75□□□□□ -1.17
ATRX-209ENST00000623242 MORN1Q5T089 497 aa7.74□□□□□ -1.17
ATRX-209ENST00000623242 PRPF38BQ5VTL8 546 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms