RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 PNISRQ8TF01 805 aaKnown RBP20.05■□□□□ 0.8
GABRB3-215ENST00000622697 GNL2Q13823 731 aaKnown RBP20.04■□□□□ 0.8
GABRB3-215ENST00000622697 LNPKQ9C0E8 428 aa20.04■□□□□ 0.8
GABRB3-215ENST00000622697 MTHFSP49914 203 aa20.03■□□□□ 0.8
GABRB3-215ENST00000622697 NRDCO43847 1150 aa20.03■□□□□ 0.8
GABRB3-215ENST00000622697 CCDC9Q9Y3X0 531 aaKnown RBP20.03■□□□□ 0.8
GABRB3-215ENST00000622697 KIAA2012Q0VF49 1180 aa20.03■□□□□ 0.8
GABRB3-215ENST00000622697 DDX49Q9Y6V7 483 aaKnown RBP20.03■□□□□ 0.8
GABRB3-215ENST00000622697 SYAP1Q96A49 352 aaPredicted RBP20.02■□□□□ 0.8
GABRB3-215ENST00000622697 DDX11L8A8MPP1 907 aa20.02■□□□□ 0.8
GABRB3-215ENST00000622697 C11orf95C9JLR9 678 aaPredicted RBP20.02■□□□□ 0.8
GABRB3-215ENST00000622697 CYB5RLQ6IPT4 315 aa20.02■□□□□ 0.8
GABRB3-215ENST00000622697 HSP90B1P14625 803 aaKnown RBP20.02■□□□□ 0.79
GABRB3-215ENST00000622697 POLA1P09884 1462 aaPredicted RBP20.01■□□□□ 0.79
GABRB3-215ENST00000622697 GRIN2BQ13224 1484 aa20.01■□□□□ 0.79
GABRB3-215ENST00000622697 GPATCH3Q96I76 525 aa20■□□□□ 0.79
GABRB3-215ENST00000622697 TCP11L2Q8N4U5 519 aa20■□□□□ 0.79
GABRB3-215ENST00000622697 KIAA1107Q9UPP5 1409 aa20■□□□□ 0.79
GABRB3-215ENST00000622697 BCAR3O75815 825 aa20■□□□□ 0.79
GABRB3-215ENST00000622697 NFKBIBQ15653 356 aa20■□□□□ 0.79
GABRB3-215ENST00000622697 EFCAB5A4FU69 1503 aa19.99■□□□□ 0.79
GABRB3-215ENST00000622697 EHBP1L1Q8N3D4 1523 aa19.99■□□□□ 0.79
GABRB3-215ENST00000622697 TOPBP1Q92547 1522 aa19.99■□□□□ 0.79
GABRB3-215ENST00000622697 GORABQ5T7V8 394 aa19.99■□□□□ 0.79
GABRB3-215ENST00000622697 ARHGAP5Q13017 1502 aa19.99■□□□□ 0.79
GABRB3-215ENST00000622697 EIF2S2P20042 333 aaKnown RBP19.99■□□□□ 0.79
GABRB3-215ENST00000622697 NAIPQ13075 1403 aa19.98■□□□□ 0.79
GABRB3-215ENST00000622697 C9orf84Q5VXU9 1444 aa19.96■□□□□ 0.79
GABRB3-215ENST00000622697 NGEFQ8N5V2 710 aa19.95■□□□□ 0.78
GABRB3-215ENST00000622697 DAPK1P53355 1430 aa19.95■□□□□ 0.78
GABRB3-215ENST00000622697 CDK13Q14004 1512 aaKnown RBP19.95■□□□□ 0.78
GABRB3-215ENST00000622697 C22orf23Q9BZE7 217 aa19.94■□□□□ 0.78
GABRB3-215ENST00000622697 SLC12A5Q9H2X9 1139 aa19.94■□□□□ 0.78
GABRB3-215ENST00000622697 TAF7LQ5H9L4 462 aa19.92■□□□□ 0.78
GABRB3-215ENST00000622697 KIF16BQ96L93 1317 aa19.92■□□□□ 0.78
GABRB3-215ENST00000622697 CHMP4AQ9BY43 222 aa19.92■□□□□ 0.78
GABRB3-215ENST00000622697 TSR2Q969E8 191 aaKnown RBP19.91■□□□□ 0.78
GABRB3-215ENST00000622697 CHMP5Q9NZZ3 219 aa19.91■□□□□ 0.78
GABRB3-215ENST00000622697 PCF11O94913 1555 aaKnown RBP19.91■□□□□ 0.78
GABRB3-215ENST00000622697 API5Q9BZZ5 524 aaKnown RBP19.91■□□□□ 0.78
GABRB3-215ENST00000622697 EXOSC9Q06265 439 aaKnown RBP19.9■□□□□ 0.78
GABRB3-215ENST00000622697 ISY1Q9ULR0 285 aaKnown RBP19.9■□□□□ 0.78
GABRB3-215ENST00000622697 FKBP5Q13451 457 aaPredicted RBP19.89■□□□□ 0.77
GABRB3-215ENST00000622697 SKAP1Q86WV1 359 aa19.89■□□□□ 0.77
GABRB3-215ENST00000622697 SMG6Q86US8 1419 aaKnown RBP19.88■□□□□ 0.77
GABRB3-215ENST00000622697 TEFQ10587 303 aa19.88■□□□□ 0.77
GABRB3-215ENST00000622697 PDZRN3Q9UPQ7 1066 aa19.88■□□□□ 0.77
GABRB3-215ENST00000622697 TROQ12816 1431 aaPredicted RBP19.88■□□□□ 0.77
GABRB3-215ENST00000622697 HTATSF1O43719 755 aaKnown RBP19.88■□□□□ 0.77
GABRB3-215ENST00000622697 HDAC5Q9UQL6 1122 aa19.88■□□□□ 0.77
GABRB3-215ENST00000622697 STAC3Q96MF2 364 aa19.88■□□□□ 0.77
GABRB3-215ENST00000622697 C1orf115Q9H7X2 142 aa19.87■□□□□ 0.77
GABRB3-215ENST00000622697 GNAI1P63096 354 aa19.87■□□□□ 0.77
GABRB3-215ENST00000622697 SYNJ2O15056 1496 aa19.87■□□□□ 0.77
GABRB3-215ENST00000622697 NUTM2GQ5VZR2 741 aa19.87■□□□□ 0.77
GABRB3-215ENST00000622697 BACH2Q9BYV9 841 aa19.86■□□□□ 0.77
GABRB3-215ENST00000622697 ANO2Q9NQ90 1003 aa19.86■□□□□ 0.77
GABRB3-215ENST00000622697 SUPT6HQ7KZ85 1726 aaKnown RBP19.86■□□□□ 0.77
GABRB3-215ENST00000622697 FRAT2O75474 233 aaPredicted RBP19.86■□□□□ 0.77
GABRB3-215ENST00000622697 AMER1Q5JTC6 1135 aaPredicted RBP19.86■□□□□ 0.77
GABRB3-215ENST00000622697 OSCARQ8IYS5 282 aa19.86■□□□□ 0.77
GABRB3-215ENST00000622697 TSPYL4Q9UJ04 414 aa19.85■□□□□ 0.77
GABRB3-215ENST00000622697 REC8O95072 547 aa19.85■□□□□ 0.77
GABRB3-215ENST00000622697 SKOR2Q2VWA4 1001 aaPredicted RBP19.85■□□□□ 0.77
GABRB3-215ENST00000622697 C1orf141Q5JVX7 400 aa19.85■□□□□ 0.77
GABRB3-215ENST00000622697 HMGXB3Q12766 1538 aa19.85■□□□□ 0.77
GABRB3-215ENST00000622697 C9orf78Q9NZ63 289 aaPredicted RBP19.84■□□□□ 0.77
GABRB3-215ENST00000622697 HECW1Q76N89 1606 aa19.84■□□□□ 0.77
GABRB3-215ENST00000622697 DIAPH3Q9NSV4 1193 aa19.84■□□□□ 0.77
GABRB3-215ENST00000622697 CC2D2AQ9P2K1 1620 aa19.84■□□□□ 0.77
GABRB3-215ENST00000622697 EPRSP07814 1512 aaKnown RBP19.84■□□□□ 0.77
GABRB3-215ENST00000622697 PRKAR2BP31323 418 aa19.84■□□□□ 0.77
GABRB3-215ENST00000622697 CSPP1Q1MSJ5 1256 aa19.84■□□□□ 0.77
GABRB3-215ENST00000622697 ERBINQ96RT1 1412 aa19.83■□□□□ 0.77
GABRB3-215ENST00000622697 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.83■□□□□ 0.77
GABRB3-215ENST00000622697 PHF14O94880 888 aa19.83■□□□□ 0.76
GABRB3-215ENST00000622697 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.82■□□□□ 0.76
GABRB3-215ENST00000622697 PRAM1Q96QH2 718 aa19.82■□□□□ 0.76
GABRB3-215ENST00000622697 TOMM22Q9NS69 142 aa19.82■□□□□ 0.76
GABRB3-215ENST00000622697 SNAPC4Q5SXM2 1469 aa19.82■□□□□ 0.76
GABRB3-215ENST00000622697 FAM69CQ0P6D2 419 aa19.81■□□□□ 0.76
GABRB3-215ENST00000622697 MCTP1Q6DN14 999 aa19.81■□□□□ 0.76
GABRB3-215ENST00000622697 NOB1Q9ULX3 412 aaKnown RBP19.81■□□□□ 0.76
GABRB3-215ENST00000622697 MSH5O43196 834 aa19.81■□□□□ 0.76
GABRB3-215ENST00000622697 H3BQV1 296 aa19.8■□□□□ 0.76
GABRB3-215ENST00000622697 IFFO2Q5TF58 517 aa19.8■□□□□ 0.76
GABRB3-215ENST00000622697 BRPF3Q9ULD4 1205 aa19.8■□□□□ 0.76
GABRB3-215ENST00000622697 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.79■□□□□ 0.76
GABRB3-215ENST00000622697 INTS3Q68E01 1043 aaKnown RBP19.79■□□□□ 0.76
GABRB3-215ENST00000622697 ANKRD30BQ9BXX2 1392 aa19.79■□□□□ 0.76
GABRB3-215ENST00000622697 SCAPERQ9BY12 1400 aa19.78■□□□□ 0.76
GABRB3-215ENST00000622697 PDE3AQ14432 1141 aa19.78■□□□□ 0.76
GABRB3-215ENST00000622697 SF3A1Q15459 793 aaKnown RBP19.78■□□□□ 0.76
GABRB3-215ENST00000622697 C20orf194Q5TEA3 1177 aa19.78■□□□□ 0.76
GABRB3-215ENST00000622697 DNMBPQ6XZF7 1577 aa19.78■□□□□ 0.76
GABRB3-215ENST00000622697 DNAJC5BQ9UF47 199 aa19.77■□□□□ 0.76
GABRB3-215ENST00000622697 MRC2Q9UBG0 1479 aa19.77■□□□□ 0.76
GABRB3-215ENST00000622697 RSPH6AQ9H0K4 717 aa19.77■□□□□ 0.76
GABRB3-215ENST00000622697 IFIT2P09913 472 aaKnown RBP19.77■□□□□ 0.75
GABRB3-215ENST00000622697 FAM184AQ8NB25 1140 aa19.77■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms