RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 CDCA8Q53HL2 280 aa16.97■□□□□ 0.31
CHD1L-210ENST00000622533 PKNOX2Q96KN3 472 aa16.97■□□□□ 0.31
CHD1L-210ENST00000622533 KNSTRNQ9Y448 316 aa16.94■□□□□ 0.3
CHD1L-210ENST00000622533 C8orf34Q49A92 452 aa16.93■□□□□ 0.3
CHD1L-210ENST00000622533 RRAGDQ9NQL2 400 aaPredicted RBP16.93■□□□□ 0.3
CHD1L-210ENST00000622533 SYNMO15061 1565 aa16.93■□□□□ 0.3
CHD1L-210ENST00000622533 WDR43Q15061 677 aaKnown RBP eCLIP16.93■□□□□ 0.3
CHD1L-210ENST00000622533 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.93■□□□□ 0.3
CHD1L-210ENST00000622533 POGKQ9P215 609 aa16.93■□□□□ 0.3
CHD1L-210ENST00000622533 CLASP1Q7Z460 1538 aa16.92■□□□□ 0.3
CHD1L-210ENST00000622533 IQGAP1P46940 1657 aa16.92■□□□□ 0.3
CHD1L-210ENST00000622533 WDR7Q9Y4E6 1490 aa16.92■□□□□ 0.3
CHD1L-210ENST00000622533 ABCC2Q92887 1545 aa16.92■□□□□ 0.3
CHD1L-210ENST00000622533 FAM161AQ3B820 660 aa16.92■□□□□ 0.3
CHD1L-210ENST00000622533 RGS3P49796 1198 aa16.91■□□□□ 0.3
CHD1L-210ENST00000622533 SHROOM2Q13796 1616 aa16.91■□□□□ 0.3
CHD1L-210ENST00000622533 MADDQ8WXG6 1647 aa16.91■□□□□ 0.3
CHD1L-210ENST00000622533 ARXQ96QS3 562 aa16.91■□□□□ 0.3
CHD1L-210ENST00000622533 CENPQQ7L2Z9 268 aaPredicted RBP16.9■□□□□ 0.3
CHD1L-210ENST00000622533 SCAPERQ9BY12 1400 aa16.9■□□□□ 0.3
CHD1L-210ENST00000622533 NPC1L1Q9UHC9 1359 aa16.9■□□□□ 0.3
CHD1L-210ENST00000622533 SLC24A1O60721 1099 aa16.9■□□□□ 0.3
CHD1L-210ENST00000622533 ADAMTS8Q9UP79 889 aa16.9■□□□□ 0.3
CHD1L-210ENST00000622533 PIK3C2GO75747 1445 aa16.89■□□□□ 0.29
CHD1L-210ENST00000622533 SCAF11Q99590 1463 aaKnown RBP16.89■□□□□ 0.29
CHD1L-210ENST00000622533 PLCH2O75038 1416 aa16.89■□□□□ 0.29
CHD1L-210ENST00000622533 KDM2BQ8NHM5 1336 aa16.89■□□□□ 0.29
CHD1L-210ENST00000622533 PPP2R1AP30153 589 aa16.89■□□□□ 0.29
CHD1L-210ENST00000622533 TRPM2O94759 1503 aa16.88■□□□□ 0.29
CHD1L-210ENST00000622533 EFCAB2Q5VUJ9 269 aa16.87■□□□□ 0.29
CHD1L-210ENST00000622533 ASXL1Q8IXJ9 1541 aa16.87■□□□□ 0.29
CHD1L-210ENST00000622533 EIF3AQ14152 1382 aaKnown RBP16.87■□□□□ 0.29
CHD1L-210ENST00000622533 SPHKAPQ2M3C7 1700 aa16.87■□□□□ 0.29
CHD1L-210ENST00000622533 GOLGA2Q08379 1002 aa16.87■□□□□ 0.29
CHD1L-210ENST00000622533 ZNF521Q96K83 1311 aa16.86■□□□□ 0.29
CHD1L-210ENST00000622533 DUSP27Q5VZP5 1158 aa16.86■□□□□ 0.29
CHD1L-210ENST00000622533 AMER1Q5JTC6 1135 aaPredicted RBP16.86■□□□□ 0.29
CHD1L-210ENST00000622533 ABCC1P33527 1531 aa16.86■□□□□ 0.29
CHD1L-210ENST00000622533 CEP152O94986 1710 aa16.85■□□□□ 0.29
CHD1L-210ENST00000622533 RTEL1-TNFRSF6BF6WH68 1400 aa16.85■□□□□ 0.29
CHD1L-210ENST00000622533 VSIG10Q8N0Z9 540 aa16.85■□□□□ 0.29
CHD1L-210ENST00000622533 NGEFQ8N5V2 710 aa16.85■□□□□ 0.29
CHD1L-210ENST00000622533 PLEKHH1Q9ULM0 1364 aa16.83■□□□□ 0.29
CHD1L-210ENST00000622533 PTPRTO14522 1441 aa16.83■□□□□ 0.29
CHD1L-210ENST00000622533 CHD1O14646 1710 aa16.83■□□□□ 0.28
CHD1L-210ENST00000622533 KIAA1210Q9ULL0 1709 aa16.83■□□□□ 0.28
CHD1L-210ENST00000622533 NEURL4Q96JN8 1562 aa16.83■□□□□ 0.28
CHD1L-210ENST00000622533 SLKQ9H2G2 1235 aaPredicted RBP16.82■□□□□ 0.28
CHD1L-210ENST00000622533 NAP1L5Q96NT1 182 aaPredicted RBP16.81■□□□□ 0.28
CHD1L-210ENST00000622533 ZMYND15Q9H091 742 aa16.81■□□□□ 0.28
CHD1L-210ENST00000622533 ARAP3Q8WWN8 1544 aa16.81■□□□□ 0.28
CHD1L-210ENST00000622533 SLFN5Q08AF3 891 aa16.8■□□□□ 0.28
CHD1L-210ENST00000622533 KDM5AP29375 1690 aaKnown RBP16.8■□□□□ 0.28
CHD1L-210ENST00000622533 GLIPR1L2Q4G1C9 344 aa16.8■□□□□ 0.28
CHD1L-210ENST00000622533 UHRF1BP1LA0JNW5 1464 aa16.79■□□□□ 0.28
CHD1L-210ENST00000622533 DEPDC5O75140 1603 aa16.79■□□□□ 0.28
CHD1L-210ENST00000622533 TRMT2AQ8IZ69 625 aaKnown RBP16.79■□□□□ 0.28
CHD1L-210ENST00000622533 TET3O43151 1660 aa16.79■□□□□ 0.28
CHD1L-210ENST00000622533 MYOM1P52179 1685 aa16.79■□□□□ 0.28
CHD1L-210ENST00000622533 SPAG9O60271 1321 aaKnown RBP16.78■□□□□ 0.28
CHD1L-210ENST00000622533 NKTRP30414 1462 aaKnown RBP16.77■□□□□ 0.28
CHD1L-210ENST00000622533 TRAPPC8Q9Y2L5 1435 aa16.77■□□□□ 0.28
CHD1L-210ENST00000622533 KANK1Q14678 1352 aa16.77■□□□□ 0.28
CHD1L-210ENST00000622533 CLTCL1P53675 1640 aa16.77■□□□□ 0.28
CHD1L-210ENST00000622533 ZCCHC11Q5TAX3 1644 aaKnown RBP16.77■□□□□ 0.27
CHD1L-210ENST00000622533 ZFYVE16Q7Z3T8 1539 aa16.76■□□□□ 0.27
CHD1L-210ENST00000622533 E9PSI1 815 aa16.76■□□□□ 0.27
CHD1L-210ENST00000622533 NINLQ9Y2I6 1382 aa16.75■□□□□ 0.27
CHD1L-210ENST00000622533 SEC24BO95487 1268 aa16.75■□□□□ 0.27
CHD1L-210ENST00000622533 USP19O94966 1318 aa16.74■□□□□ 0.27
CHD1L-210ENST00000622533 L1TD1Q5T7N2 865 aaKnown RBP16.74■□□□□ 0.27
CHD1L-210ENST00000622533 MYOM2P54296 1465 aa16.73■□□□□ 0.27
CHD1L-210ENST00000622533 PNNQ9H307 717 aaKnown RBP16.73■□□□□ 0.27
CHD1L-210ENST00000622533 VWDEQ8N2E2 1590 aa16.73■□□□□ 0.27
CHD1L-210ENST00000622533 HSP90AA2PQ14568 343 aaPredicted RBP16.73■□□□□ 0.27
CHD1L-210ENST00000622533 PANK2Q9BZ23 570 aa16.73■□□□□ 0.27
CHD1L-210ENST00000622533 GZF1Q9H116 711 aaPredicted RBP16.73■□□□□ 0.27
CHD1L-210ENST00000622533 XRCC6P12956 609 aaKnown RBP eCLIP16.72■□□□□ 0.27
CHD1L-210ENST00000622533 CGNL1Q0VF96 1302 aa16.7■□□□□ 0.26
CHD1L-210ENST00000622533 ERCC6L2Q5T890 1561 aa16.7■□□□□ 0.26
CHD1L-210ENST00000622533 MAP3K4Q9Y6R4 1608 aa16.7■□□□□ 0.26
CHD1L-210ENST00000622533 HSP90AA1P07900 732 aaKnown RBP16.69■□□□□ 0.26
CHD1L-210ENST00000622533 PDE3AQ14432 1141 aa16.69■□□□□ 0.26
CHD1L-210ENST00000622533 APAF1O14727 1248 aa16.69■□□□□ 0.26
CHD1L-210ENST00000622533 SPRYD3Q8NCJ5 442 aa16.69■□□□□ 0.26
CHD1L-210ENST00000622533 SBNO2Q9Y2G9 1366 aa16.69■□□□□ 0.26
CHD1L-210ENST00000622533 AAMPQ13685 434 aa16.68■□□□□ 0.26
CHD1L-210ENST00000622533 ERVK-7P63135 1459 aa16.68■□□□□ 0.26
CHD1L-210ENST00000622533 POLR3AO14802 1390 aaPredicted RBP16.67■□□□□ 0.26
CHD1L-210ENST00000622533 IGHDP01880 384 aa16.67■□□□□ 0.26
CHD1L-210ENST00000622533 ATP7AQ04656 1500 aa16.67■□□□□ 0.26
CHD1L-210ENST00000622533 INO80Q9ULG1 1556 aaPredicted RBP16.67■□□□□ 0.26
CHD1L-210ENST00000622533 BECN1Q14457 450 aa16.67■□□□□ 0.26
CHD1L-210ENST00000622533 CCDC146Q8IYE0 955 aa16.67■□□□□ 0.26
CHD1L-210ENST00000622533 MYO3AQ8NEV4 1616 aa16.67■□□□□ 0.26
CHD1L-210ENST00000622533 GOLGA6L3A6NEY3 463 aa16.66■□□□□ 0.26
CHD1L-210ENST00000622533 MAPK8IP3Q9UPT6 1336 aa16.66■□□□□ 0.26
CHD1L-210ENST00000622533 ABCA6Q8N139 1617 aa16.65■□□□□ 0.26
CHD1L-210ENST00000622533 CLCN1P35523 988 aa16.65■□□□□ 0.26
CHD1L-210ENST00000622533 AFAP1Q8N556 730 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms