RNA–Protein interactions for RNA: ENST00000622277.4

SNX12-207, Transcript of sorting nexin 12, humanhuman

APPRIS P3 TSL 4 BASIC

Gene SNX12, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-207ENST00000622277 RALBP1Q15311 655 aa17.39■□□□□ 0.37
SNX12-207ENST00000622277 TMF1P82094 1093 aa17.39■□□□□ 0.37
SNX12-207ENST00000622277 CAMSAP1Q5T5Y3 1602 aa17.38■□□□□ 0.37
SNX12-207ENST00000622277 BRD4O60885 1362 aaPredicted RBP17.38■□□□□ 0.37
SNX12-207ENST00000622277 MYBBP1AQ9BQG0 1328 aaKnown RBP17.37■□□□□ 0.37
SNX12-207ENST00000622277 RAPGEF3O95398 923 aa17.37■□□□□ 0.37
SNX12-207ENST00000622277 NEFLP07196 543 aa17.37■□□□□ 0.37
SNX12-207ENST00000622277 PARD3Q8TEW0 1356 aa17.37■□□□□ 0.37
SNX12-207ENST00000622277 PER1O15534 1290 aaPredicted RBP17.37■□□□□ 0.37
SNX12-207ENST00000622277 WASHC2CQ9Y4E1 1318 aa17.35■□□□□ 0.37
SNX12-207ENST00000622277 ZC3H13Q5T200 1668 aaKnown RBP17.35■□□□□ 0.37
SNX12-207ENST00000622277 DIP2BQ9P265 1576 aa17.35■□□□□ 0.37
SNX12-207ENST00000622277 ZMYM4Q5VZL5 1548 aa17.34■□□□□ 0.37
SNX12-207ENST00000622277 PNISRQ8TF01 805 aaKnown RBP17.34■□□□□ 0.37
SNX12-207ENST00000622277 EIF3AQ14152 1382 aaKnown RBP17.34■□□□□ 0.37
SNX12-207ENST00000622277 NOS1P29475 1434 aa17.34■□□□□ 0.37
SNX12-207ENST00000622277 LRPPRCP42704 1394 aaKnown RBP17.33■□□□□ 0.37
SNX12-207ENST00000622277 GGT6Q6P531 493 aa17.33■□□□□ 0.36
SNX12-207ENST00000622277 CNGB1Q14028 1251 aaPredicted RBP17.32■□□□□ 0.36
SNX12-207ENST00000622277 PPLO60437 1756 aa17.32■□□□□ 0.36
SNX12-207ENST00000622277 ADGRF5Q8IZF2 1346 aa17.32■□□□□ 0.36
SNX12-207ENST00000622277 PIK3C2BO00750 1634 aa17.32■□□□□ 0.36
SNX12-207ENST00000622277 SIGLEC1Q9BZZ2 1709 aa17.32■□□□□ 0.36
SNX12-207ENST00000622277 SYNMO15061 1565 aa17.32■□□□□ 0.36
SNX12-207ENST00000622277 ARHGAP31Q2M1Z3 1444 aa17.32■□□□□ 0.36
SNX12-207ENST00000622277 TMC1Q8TDI8 760 aa17.31■□□□□ 0.36
SNX12-207ENST00000622277 YEATS2Q9ULM3 1422 aa17.31■□□□□ 0.36
SNX12-207ENST00000622277 SETBP1Q9Y6X0 1596 aa17.31■□□□□ 0.36
SNX12-207ENST00000622277 MYO3AQ8NEV4 1616 aa17.3■□□□□ 0.36
SNX12-207ENST00000622277 PANK3Q9H999 370 aa17.3■□□□□ 0.36
SNX12-207ENST00000622277 RBM19Q9Y4C8 960 aaKnown RBP17.3■□□□□ 0.36
SNX12-207ENST00000622277 MYOM1P52179 1685 aa17.29■□□□□ 0.36
SNX12-207ENST00000622277 CDCA8Q53HL2 280 aa17.28■□□□□ 0.36
SNX12-207ENST00000622277 CFAP70Q5T0N1 1121 aa17.28■□□□□ 0.36
SNX12-207ENST00000622277 NLRP13Q86W25 1043 aa17.28■□□□□ 0.36
SNX12-207ENST00000622277 PIK3C2GO75747 1445 aa17.27■□□□□ 0.36
SNX12-207ENST00000622277 RPGRIP1LQ68CZ1 1315 aa17.27■□□□□ 0.35
SNX12-207ENST00000622277 KDM5AP29375 1690 aaKnown RBP17.27■□□□□ 0.35
SNX12-207ENST00000622277 SMG6Q86US8 1419 aaKnown RBP17.26■□□□□ 0.35
SNX12-207ENST00000622277 ERICH6Q7L0X2 663 aa17.25■□□□□ 0.35
SNX12-207ENST00000622277 REREQ9P2R6 1566 aa17.24■□□□□ 0.35
SNX12-207ENST00000622277 CFAP65Q6ZU64 1925 aaKnown RBP17.24■□□□□ 0.35
SNX12-207ENST00000622277 FAM69CQ0P6D2 419 aa17.24■□□□□ 0.35
SNX12-207ENST00000622277 SBNO2Q9Y2G9 1366 aa17.24■□□□□ 0.35
SNX12-207ENST00000622277 ERVK-7P63135 1459 aa17.24■□□□□ 0.35
SNX12-207ENST00000622277 ADGRB1O14514 1584 aa17.23■□□□□ 0.35
SNX12-207ENST00000622277 INSRP06213 1382 aa17.22■□□□□ 0.35
SNX12-207ENST00000622277 NEXMIFQ5QGS0 1516 aa17.22■□□□□ 0.35
SNX12-207ENST00000622277 CHGAP10645 457 aaKnown RBP17.21■□□□□ 0.35
SNX12-207ENST00000622277 C14orf93Q9H972 538 aaKnown RBP17.21■□□□□ 0.35
SNX12-207ENST00000622277 PREX1Q8TCU6 1659 aa17.21■□□□□ 0.34
SNX12-207ENST00000622277 CC2D1BQ5T0F9 858 aaKnown RBP17.2■□□□□ 0.34
SNX12-207ENST00000622277 ERICH6BQ5W0A0 696 aa17.2■□□□□ 0.34
SNX12-207ENST00000622277 AGLP35573 1532 aa17.2■□□□□ 0.34
SNX12-207ENST00000622277 ASXL1Q8IXJ9 1541 aa17.2■□□□□ 0.34
SNX12-207ENST00000622277 NPC1L1Q9UHC9 1359 aa17.2■□□□□ 0.34
SNX12-207ENST00000622277 TSPOAP1O95153 1857 aa17.18■□□□□ 0.34
SNX12-207ENST00000622277 AMER1Q5JTC6 1135 aaPredicted RBP17.18■□□□□ 0.34
SNX12-207ENST00000622277 NUDCQ9Y266 331 aa17.18■□□□□ 0.34
SNX12-207ENST00000622277 BCL11AQ9H165 835 aa17.17■□□□□ 0.34
SNX12-207ENST00000622277 KNSTRNQ9Y448 316 aa17.17■□□□□ 0.34
SNX12-207ENST00000622277 ZFYVE9O95405 1425 aa17.17■□□□□ 0.34
SNX12-207ENST00000622277 QRICH2Q9H0J4 1663 aa17.16■□□□□ 0.34
SNX12-207ENST00000622277 BLMP54132 1417 aaPredicted RBP17.16■□□□□ 0.34
SNX12-207ENST00000622277 TMEM131LA2VDJ0 1609 aa17.15■□□□□ 0.34
SNX12-207ENST00000622277 CENPJQ9HC77 1338 aaPredicted RBP17.15■□□□□ 0.34
SNX12-207ENST00000622277 SLC52A1Q9NWF4 448 aa17.15■□□□□ 0.34
SNX12-207ENST00000622277 IDI1Q13907 227 aa17.13■□□□□ 0.33
SNX12-207ENST00000622277 VGFO15240 615 aaPredicted RBP17.13■□□□□ 0.33
SNX12-207ENST00000622277 KIF13AQ9H1H9 1805 aa17.12■□□□□ 0.33
SNX12-207ENST00000622277 RNF123Q5XPI4 1314 aa17.12■□□□□ 0.33
SNX12-207ENST00000622277 TRHP20396 242 aaPredicted RBP17.12■□□□□ 0.33
SNX12-207ENST00000622277 IRX6P78412 446 aaPredicted RBP17.12■□□□□ 0.33
SNX12-207ENST00000622277 PPP6R1Q9UPN7 881 aa17.11■□□□□ 0.33
SNX12-207ENST00000622277 ARHGEF28Q8N1W1 1705 aaKnown RBP17.11■□□□□ 0.33
SNX12-207ENST00000622277 MYO5BQ9ULV0 1848 aa17.11■□□□□ 0.33
SNX12-207ENST00000622277 PPP2R1AP30153 589 aa17.11■□□□□ 0.33
SNX12-207ENST00000622277 ARHGEF40Q8TER5 1519 aa17.1■□□□□ 0.33
SNX12-207ENST00000622277 TRAK1Q9UPV9 953 aa17.09■□□□□ 0.33
SNX12-207ENST00000622277 MSH5O43196 834 aa17.08■□□□□ 0.33
SNX12-207ENST00000622277 TMEM132EQ6IEE7 984 aa17.08■□□□□ 0.32
SNX12-207ENST00000622277 FANCIQ9NVI1 1328 aa17.08■□□□□ 0.32
SNX12-207ENST00000622277 PPP4R2Q9NY27 417 aa17.07■□□□□ 0.32
SNX12-207ENST00000622277 CLTCQ00610 1675 aaKnown RBP17.07■□□□□ 0.32
SNX12-207ENST00000622277 PDE3BQ13370 1112 aa17.07■□□□□ 0.32
SNX12-207ENST00000622277 SPATA31D1Q6ZQQ2 1576 aa17.06■□□□□ 0.32
SNX12-207ENST00000622277 CARD14Q9BXL6 1004 aa17.06■□□□□ 0.32
SNX12-207ENST00000622277 PUS7Q96PZ0 661 aaKnown RBP17.05■□□□□ 0.32
SNX12-207ENST00000622277 USP32Q8NFA0 1604 aa17.05■□□□□ 0.32
SNX12-207ENST00000622277 TULP4Q9NRJ4 1543 aa17.04■□□□□ 0.32
SNX12-207ENST00000622277 SENP3-EIF4A1A0A087X0R7 540 aa17.04■□□□□ 0.32
SNX12-207ENST00000622277 NUTM2DQ5VT03 806 aaPredicted RBP17.04■□□□□ 0.32
SNX12-207ENST00000622277 FBXO31Q5XUX0 539 aaPredicted RBP17.03■□□□□ 0.32
SNX12-207ENST00000622277 ADAMTS8Q9UP79 889 aa17■□□□□ 0.31
SNX12-207ENST00000622277 PTPRMP28827 1452 aa16.99■□□□□ 0.31
SNX12-207ENST00000622277 NSD3Q9BZ95 1437 aa16.99■□□□□ 0.31
SNX12-207ENST00000622277 EVC2Q86UK5 1308 aa16.99■□□□□ 0.31
SNX12-207ENST00000622277 ALKQ9UM73 1620 aa16.99■□□□□ 0.31
SNX12-207ENST00000622277 A2ML1A8K2U0 1454 aa16.98■□□□□ 0.31
SNX12-207ENST00000622277 WDR43Q15061 677 aaKnown RBP eCLIP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms