RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 RALBP1Q15311 655 aa9.65□□□□□ -0.86
TRIM49B-202ENST00000622138 TERF1P54274 439 aa9.65□□□□□ -0.86
TRIM49B-202ENST00000622138 RGL3Q3MIN7 710 aa9.65□□□□□ -0.86
TRIM49B-202ENST00000622138 BBXQ8WY36 941 aaPredicted RBP9.65□□□□□ -0.86
TRIM49B-202ENST00000622138 NAP1L2Q9ULW6 460 aaPredicted RBP9.65□□□□□ -0.86
TRIM49B-202ENST00000622138 GPRASP1Q5JY77 1395 aa9.65□□□□□ -0.86
TRIM49B-202ENST00000622138 KTN1Q86UP2 1357 aaKnown RBP9.65□□□□□ -0.86
TRIM49B-202ENST00000622138 MAST1Q9Y2H9 1570 aa9.65□□□□□ -0.87
TRIM49B-202ENST00000622138 PRDM15P57071 1507 aaPredicted RBP9.65□□□□□ -0.87
TRIM49B-202ENST00000622138 GOLGA6L3A6NEY3 463 aa9.64□□□□□ -0.87
TRIM49B-202ENST00000622138 CANXP27824 592 aaKnown RBP9.64□□□□□ -0.87
TRIM49B-202ENST00000622138 UTP14CQ5TAP6 766 aaKnown RBP9.64□□□□□ -0.87
TRIM49B-202ENST00000622138 IPO4Q8TEX9 1081 aaKnown RBP9.64□□□□□ -0.87
TRIM49B-202ENST00000622138 GTF2E1P29083 439 aaPredicted RBP9.64□□□□□ -0.87
TRIM49B-202ENST00000622138 EXOC6Q8TAG9 804 aa9.64□□□□□ -0.87
TRIM49B-202ENST00000622138 LAMC1P11047 1609 aa9.64□□□□□ -0.87
TRIM49B-202ENST00000622138 ARHGAP5Q13017 1502 aa9.64□□□□□ -0.87
TRIM49B-202ENST00000622138 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.64□□□□□ -0.87
TRIM49B-202ENST00000622138 ESPNB1AK53 854 aa9.63□□□□□ -0.87
TRIM49B-202ENST00000622138 PER1O15534 1290 aaPredicted RBP9.63□□□□□ -0.87
TRIM49B-202ENST00000622138 MTERF4Q7Z6M4 381 aaKnown RBP9.63□□□□□ -0.87
TRIM49B-202ENST00000622138 IQGAP3Q86VI3 1631 aa9.63□□□□□ -0.87
TRIM49B-202ENST00000622138 PLEKHH2Q8IVE3 1493 aa9.63□□□□□ -0.87
TRIM49B-202ENST00000622138 XRCC6P12956 609 aaKnown RBP eCLIP9.63□□□□□ -0.87
TRIM49B-202ENST00000622138 NLRP13Q86W25 1043 aa9.63□□□□□ -0.87
TRIM49B-202ENST00000622138 TESK2Q96S53 571 aa9.63□□□□□ -0.87
TRIM49B-202ENST00000622138 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.63□□□□□ -0.87
TRIM49B-202ENST00000622138 ISY1Q9ULR0 285 aaKnown RBP9.63□□□□□ -0.87
TRIM49B-202ENST00000622138 RSPH4AQ5TD94 716 aa9.62□□□□□ -0.87
TRIM49B-202ENST00000622138 CDCA7LQ96GN5 454 aa9.62□□□□□ -0.87
TRIM49B-202ENST00000622138 PLXNC1O60486 1568 aa9.62□□□□□ -0.87
TRIM49B-202ENST00000622138 ERCC6L2Q5T890 1561 aa9.61□□□□□ -0.87
TRIM49B-202ENST00000622138 SLC4A3P48751 1232 aa9.61□□□□□ -0.87
TRIM49B-202ENST00000622138 CHD1O14646 1710 aa9.61□□□□□ -0.87
TRIM49B-202ENST00000622138 RNF17Q9BXT8 1623 aaKnown RBP9.61□□□□□ -0.87
TRIM49B-202ENST00000622138 CC2D1BQ5T0F9 858 aaKnown RBP9.61□□□□□ -0.87
TRIM49B-202ENST00000622138 STAC3Q96MF2 364 aa9.61□□□□□ -0.87
TRIM49B-202ENST00000622138 RCAN3Q9UKA8 241 aa9.61□□□□□ -0.87
TRIM49B-202ENST00000622138 BLMP54132 1417 aaPredicted RBP9.6□□□□□ -0.87
TRIM49B-202ENST00000622138 ERBINQ96RT1 1412 aa9.6□□□□□ -0.87
TRIM49B-202ENST00000622138 MAGI2Q86UL8 1455 aa9.6□□□□□ -0.87
TRIM49B-202ENST00000622138 MRE11P49959 708 aa9.6□□□□□ -0.87
TRIM49B-202ENST00000622138 FAM161AQ3B820 660 aa9.6□□□□□ -0.87
TRIM49B-202ENST00000622138 EIF2AK4Q9P2K8 1649 aaKnown RBP9.59□□□□□ -0.87
TRIM49B-202ENST00000622138 PANK3Q9H999 370 aa9.58□□□□□ -0.88
TRIM49B-202ENST00000622138 SHROOM2Q13796 1616 aa9.58□□□□□ -0.88
TRIM49B-202ENST00000622138 KIAA1211Q6ZU35 1233 aa9.58□□□□□ -0.88
TRIM49B-202ENST00000622138 PLIN1O60240 522 aa9.57□□□□□ -0.88
TRIM49B-202ENST00000622138 DMTNQ08495 405 aa9.57□□□□□ -0.88
TRIM49B-202ENST00000622138 SKAP1Q86WV1 359 aa9.57□□□□□ -0.88
TRIM49B-202ENST00000622138 ATP10AO60312 1499 aa9.57□□□□□ -0.88
TRIM49B-202ENST00000622138 DUOX2Q9NRD8 1548 aa9.57□□□□□ -0.88
TRIM49B-202ENST00000622138 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.57□□□□□ -0.88
TRIM49B-202ENST00000622138 MADDQ8WXG6 1647 aa9.57□□□□□ -0.88
TRIM49B-202ENST00000622138 ABCC2Q92887 1545 aa9.57□□□□□ -0.88
TRIM49B-202ENST00000622138 ERBB4Q15303 1308 aa9.56□□□□□ -0.88
TRIM49B-202ENST00000622138 C8orf34Q49A92 452 aa9.56□□□□□ -0.88
TRIM49B-202ENST00000622138 MYH16Q9H6N6 1097 aa9.56□□□□□ -0.88
TRIM49B-202ENST00000622138 ZMYM4Q5VZL5 1548 aa9.56□□□□□ -0.88
TRIM49B-202ENST00000622138 WDR7Q9Y4E6 1490 aa9.56□□□□□ -0.88
TRIM49B-202ENST00000622138 PDE3BQ13370 1112 aa9.56□□□□□ -0.88
TRIM49B-202ENST00000622138 BECN1Q14457 450 aa9.56□□□□□ -0.88
TRIM49B-202ENST00000622138 PANK2Q9BZ23 570 aa9.56□□□□□ -0.88
TRIM49B-202ENST00000622138 TRIM44Q96DX7 344 aaPredicted RBP9.55□□□□□ -0.88
TRIM49B-202ENST00000622138 CHMP4BQ9H444 224 aaKnown RBP9.55□□□□□ -0.88
TRIM49B-202ENST00000622138 IQGAP1P46940 1657 aa9.55□□□□□ -0.88
TRIM49B-202ENST00000622138 ABCC1P33527 1531 aa9.54□□□□□ -0.88
TRIM49B-202ENST00000622138 TRAPPC8Q9Y2L5 1435 aa9.54□□□□□ -0.88
TRIM49B-202ENST00000622138 OFD1O75665 1012 aa9.54□□□□□ -0.88
TRIM49B-202ENST00000622138 KIF20AO95235 890 aa9.54□□□□□ -0.88
TRIM49B-202ENST00000622138 CRBNQ96SW2 442 aa9.54□□□□□ -0.88
TRIM49B-202ENST00000622138 INSRP06213 1382 aa9.53□□□□□ -0.88
TRIM49B-202ENST00000622138 KDM2BQ8NHM5 1336 aa9.53□□□□□ -0.88
TRIM49B-202ENST00000622138 TNNT2P45379 298 aaPredicted RBP9.53□□□□□ -0.88
TRIM49B-202ENST00000622138 RIPK4P57078 832 aa9.53□□□□□ -0.88
TRIM49B-202ENST00000622138 TMF1P82094 1093 aa9.53□□□□□ -0.88
TRIM49B-202ENST00000622138 PLEKHH1Q9ULM0 1364 aa9.53□□□□□ -0.88
TRIM49B-202ENST00000622138 C20orf194Q5TEA3 1177 aa9.53□□□□□ -0.88
TRIM49B-202ENST00000622138 CENPQQ7L2Z9 268 aaPredicted RBP9.53□□□□□ -0.88
TRIM49B-202ENST00000622138 ZCCHC11Q5TAX3 1644 aaKnown RBP9.53□□□□□ -0.88
TRIM49B-202ENST00000622138 GRPEL1Q9HAV7 217 aa9.52□□□□□ -0.89
TRIM49B-202ENST00000622138 ZHX1Q9UKY1 873 aaPredicted RBP9.52□□□□□ -0.89
TRIM49B-202ENST00000622138 ADAMTS8Q9UP79 889 aa9.52□□□□□ -0.89
TRIM49B-202ENST00000622138 SPHKAPQ2M3C7 1700 aa9.52□□□□□ -0.89
TRIM49B-202ENST00000622138 MYOM1P52179 1685 aa9.52□□□□□ -0.89
TRIM49B-202ENST00000622138 CLTCL1P53675 1640 aa9.52□□□□□ -0.89
TRIM49B-202ENST00000622138 PLCH2O75038 1416 aa9.51□□□□□ -0.89
TRIM49B-202ENST00000622138 TAF3Q5VWG9 929 aa9.51□□□□□ -0.89
TRIM49B-202ENST00000622138 ARXQ96QS3 562 aa9.51□□□□□ -0.89
TRIM49B-202ENST00000622138 GTPBP4Q9BZE4 634 aaKnown RBP9.51□□□□□ -0.89
TRIM49B-202ENST00000622138 TRPM2O94759 1503 aa9.51□□□□□ -0.89
TRIM49B-202ENST00000622138 ZFYVE16Q7Z3T8 1539 aa9.5□□□□□ -0.89
TRIM49B-202ENST00000622138 PPP2R1AP30153 589 aa9.5□□□□□ -0.89
TRIM49B-202ENST00000622138 PPP4R3BQ5MIZ7 849 aa9.5□□□□□ -0.89
TRIM49B-202ENST00000622138 ANTXR1Q9H6X2 564 aa9.5□□□□□ -0.89
TRIM49B-202ENST00000622138 CEP152O94986 1710 aa9.5□□□□□ -0.89
TRIM49B-202ENST00000622138 SYNMO15061 1565 aa9.5□□□□□ -0.89
TRIM49B-202ENST00000622138 VGFO15240 615 aaPredicted RBP9.5□□□□□ -0.89
TRIM49B-202ENST00000622138 LETM1O95202 739 aaPredicted RBP9.5□□□□□ -0.89
TRIM49B-202ENST00000622138 AMER1Q5JTC6 1135 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms