RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 TET3O43151 1660 aa14.26□□□□□ -0.13
TARDBP-227ENST00000622057 RPRD2Q5VT52 1461 aaKnown RBP14.26□□□□□ -0.13
TARDBP-227ENST00000622057 ADGRB3O60242 1522 aa14.25□□□□□ -0.13
TARDBP-227ENST00000622057 RIMS2Q9UQ26 1411 aa14.25□□□□□ -0.13
TARDBP-227ENST00000622057 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.25□□□□□ -0.13
TARDBP-227ENST00000622057 FAM135BQ49AJ0 1406 aa14.24□□□□□ -0.13
TARDBP-227ENST00000622057 NUP155O75694 1391 aa14.24□□□□□ -0.13
TARDBP-227ENST00000622057 KDM5AP29375 1690 aaKnown RBP14.23□□□□□ -0.13
TARDBP-227ENST00000622057 ROCK1Q13464 1354 aa14.23□□□□□ -0.13
TARDBP-227ENST00000622057 PLEKHG1Q9ULL1 1385 aa14.23□□□□□ -0.13
TARDBP-227ENST00000622057 TBX22Q9Y458 520 aa14.23□□□□□ -0.13
TARDBP-227ENST00000622057 MSH6P52701 1360 aa14.22□□□□□ -0.13
TARDBP-227ENST00000622057 SLAIN2Q9P270 581 aa14.22□□□□□ -0.13
TARDBP-227ENST00000622057 ZFYVE9O95405 1425 aa14.22□□□□□ -0.13
TARDBP-227ENST00000622057 XIRP1Q702N8 1843 aaKnown RBP14.21□□□□□ -0.13
TARDBP-227ENST00000622057 C14orf37Q86TY3 774 aa14.21□□□□□ -0.13
TARDBP-227ENST00000622057 RGS17Q9UGC6 210 aaPredicted RBP14.21□□□□□ -0.13
TARDBP-227ENST00000622057 NKTRP30414 1462 aaKnown RBP14.18□□□□□ -0.14
TARDBP-227ENST00000622057 UNC13BO14795 1591 aa14.17□□□□□ -0.14
TARDBP-227ENST00000622057 TMEM131LA2VDJ0 1609 aa14.17□□□□□ -0.14
TARDBP-227ENST00000622057 ZNF326Q5BKZ1 582 aaKnown RBP14.17□□□□□ -0.14
TARDBP-227ENST00000622057 AMOTL2Q9Y2J4 779 aa14.17□□□□□ -0.14
TARDBP-227ENST00000622057 GCC2Q8IWJ2 1684 aa14.16□□□□□ -0.14
TARDBP-227ENST00000622057 E9PCH4 1651 aa14.15□□□□□ -0.14
TARDBP-227ENST00000622057 NWD1Q149M9 1564 aa14.15□□□□□ -0.14
TARDBP-227ENST00000622057 ATF3P18847 181 aa14.15□□□□□ -0.14
TARDBP-227ENST00000622057 MYO5BQ9ULV0 1848 aa14.15□□□□□ -0.14
TARDBP-227ENST00000622057 ADAMTS13Q76LX8 1427 aa14.15□□□□□ -0.14
TARDBP-227ENST00000622057 C19orf44Q9H6X5 657 aa14.14□□□□□ -0.15
TARDBP-227ENST00000622057 ROBO1Q9Y6N7 1651 aa14.14□□□□□ -0.15
TARDBP-227ENST00000622057 POTEAQ6S8J7 498 aa14.13□□□□□ -0.15
TARDBP-227ENST00000622057 CADPS2Q86UW7 1296 aa14.13□□□□□ -0.15
TARDBP-227ENST00000622057 IQGAP3Q86VI3 1631 aa14.12□□□□□ -0.15
TARDBP-227ENST00000622057 PIK3R4Q99570 1358 aa14.12□□□□□ -0.15
TARDBP-227ENST00000622057 NCOA3Q9Y6Q9 1424 aa14.12□□□□□ -0.15
TARDBP-227ENST00000622057 CHD2O14647 1828 aaKnown RBP14.11□□□□□ -0.15
TARDBP-227ENST00000622057 TRIM52Q96A61 297 aa14.11□□□□□ -0.15
TARDBP-227ENST00000622057 JCADQ9P266 1359 aa14.1□□□□□ -0.15
TARDBP-227ENST00000622057 PTPRUQ92729 1446 aa14.09□□□□□ -0.15
TARDBP-227ENST00000622057 MEX3CQ5U5Q3 659 aaKnown RBP14.07□□□□□ -0.16
TARDBP-227ENST00000622057 TRPM2O94759 1503 aa14.06□□□□□ -0.16
TARDBP-227ENST00000622057 DIP2AQ14689 1571 aa14.06□□□□□ -0.16
TARDBP-227ENST00000622057 BRINP3Q76B58 766 aa14.06□□□□□ -0.16
TARDBP-227ENST00000622057 PHLPP1O60346 1717 aa14.06□□□□□ -0.16
TARDBP-227ENST00000622057 METP08581 1390 aa14.05□□□□□ -0.16
TARDBP-227ENST00000622057 RRBP1Q9P2E9 1410 aaKnown RBP14.05□□□□□ -0.16
TARDBP-227ENST00000622057 SLC4A1APQ9BWU0 796 aaKnown RBP14.04□□□□□ -0.16
TARDBP-227ENST00000622057 SPATA31A6Q5VVP1 1343 aa14.04□□□□□ -0.16
TARDBP-227ENST00000622057 NAIPQ13075 1403 aa14.04□□□□□ -0.16
TARDBP-227ENST00000622057 NUTM2BA6NNL0 878 aaPredicted RBP14.03□□□□□ -0.16
TARDBP-227ENST00000622057 NUTM2EB1AL46 878 aaPredicted RBP14.03□□□□□ -0.16
TARDBP-227ENST00000622057 NUTM2AQ8IVF1 878 aaPredicted RBP14.03□□□□□ -0.16
TARDBP-227ENST00000622057 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.03□□□□□ -0.16
TARDBP-227ENST00000622057 VGFO15240 615 aaPredicted RBP14.02□□□□□ -0.17
TARDBP-227ENST00000622057 SPHKAPQ2M3C7 1700 aa14.01□□□□□ -0.17
TARDBP-227ENST00000622057 ZNF772Q68DY9 489 aaPredicted RBP14□□□□□ -0.17
TARDBP-227ENST00000622057 DDX17Q92841 729 aaKnown RBP14□□□□□ -0.17
TARDBP-227ENST00000622057 COL16A1Q07092 1604 aaPredicted RBP14□□□□□ -0.17
TARDBP-227ENST00000622057 FOXD1Q16676 465 aa13.99□□□□□ -0.17
TARDBP-227ENST00000622057 LRRC59Q96AG4 307 aaKnown RBP13.99□□□□□ -0.17
TARDBP-227ENST00000622057 SETBP1Q9Y6X0 1596 aa13.99□□□□□ -0.17
TARDBP-227ENST00000622057 CLTCL1P53675 1640 aa13.98□□□□□ -0.17
TARDBP-227ENST00000622057 NRXN3Q9Y4C0 1643 aa13.98□□□□□ -0.17
TARDBP-227ENST00000622057 DCCP43146 1447 aa13.98□□□□□ -0.17
TARDBP-227ENST00000622057 LRP6O75581 1613 aa13.97□□□□□ -0.17
TARDBP-227ENST00000622057 MST1RQ04912 1400 aa13.97□□□□□ -0.17
TARDBP-227ENST00000622057 AHDC1Q5TGY3 1603 aaPredicted RBP13.97□□□□□ -0.17
TARDBP-227ENST00000622057 RPGRIP1LQ68CZ1 1315 aa13.96□□□□□ -0.17
TARDBP-227ENST00000622057 NEXMIFQ5QGS0 1516 aa13.96□□□□□ -0.17
TARDBP-227ENST00000622057 HFM1A2PYH4 1435 aa13.96□□□□□ -0.18
TARDBP-227ENST00000622057 RXRBP28702 533 aa13.95□□□□□ -0.18
TARDBP-227ENST00000622057 RGL3Q3MIN7 710 aa13.95□□□□□ -0.18
TARDBP-227ENST00000622057 XRN1Q8IZH2 1706 aaKnown RBP13.94□□□□□ -0.18
TARDBP-227ENST00000622057 ORAI2Q96SN7 254 aa13.94□□□□□ -0.18
TARDBP-227ENST00000622057 ADGRL3Q9HAR2 1447 aa13.94□□□□□ -0.18
TARDBP-227ENST00000622057 ASXL1Q8IXJ9 1541 aa13.94□□□□□ -0.18
TARDBP-227ENST00000622057 SETD5Q9C0A6 1442 aa13.93□□□□□ -0.18
TARDBP-227ENST00000622057 C8orf37Q96NL8 207 aa13.93□□□□□ -0.18
TARDBP-227ENST00000622057 ROBO2Q9HCK4 1378 aa13.93□□□□□ -0.18
TARDBP-227ENST00000622057 AFF2P51816 1311 aa13.92□□□□□ -0.18
TARDBP-227ENST00000622057 KIF1BO60333 1816 aa13.92□□□□□ -0.18
TARDBP-227ENST00000622057 POTEDQ86YR6 584 aa13.92□□□□□ -0.18
TARDBP-227ENST00000622057 MPHOSPH9Q99550 1183 aa13.92□□□□□ -0.18
TARDBP-227ENST00000622057 STK26Q9P289 416 aa13.91□□□□□ -0.18
TARDBP-227ENST00000622057 C1orf167Q5SNV9 1468 aa13.91□□□□□ -0.18
TARDBP-227ENST00000622057 ADGRF5Q8IZF2 1346 aa13.9□□□□□ -0.18
TARDBP-227ENST00000622057 ADAMTS2O95450 1211 aa13.9□□□□□ -0.18
TARDBP-227ENST00000622057 SHPRHQ149N8 1683 aa13.9□□□□□ -0.18
TARDBP-227ENST00000622057 PNPLA6Q8IY17 1366 aa13.89□□□□□ -0.19
TARDBP-227ENST00000622057 ESCO1Q5FWF5 840 aa13.89□□□□□ -0.19
TARDBP-227ENST00000622057 UPF1Q92900 1129 aaKnown RBP eCLIP13.89□□□□□ -0.192e-11■■■□□ 15.1
TARDBP-227ENST00000622057 NGLY1Q96IV0 654 aa13.89□□□□□ -0.19
TARDBP-227ENST00000622057 QTRT2Q9H974 415 aaKnown RBP13.89□□□□□ -0.19
TARDBP-227ENST00000622057 NUTM2FA1L443 756 aa13.88□□□□□ -0.19
TARDBP-227ENST00000622057 WAPLQ7Z5K2 1190 aa13.88□□□□□ -0.19
TARDBP-227ENST00000622057 CCDC144AA2RUR9 1427 aa13.88□□□□□ -0.19
TARDBP-227ENST00000622057 PTCH1Q13635 1447 aa13.88□□□□□ -0.19
TARDBP-227ENST00000622057 TMEM132EQ6IEE7 984 aa13.87□□□□□ -0.19
TARDBP-227ENST00000622057 SOS2Q07890 1332 aaPredicted RBP13.87□□□□□ -0.19
TARDBP-227ENST00000622057 SETD1AO15047 1707 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms