RNA–Protein interactions for RNA: ENST00000622044.1

PCDHGA11-203, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA11, Length 3,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-203ENST00000622044 ANP32BQ92688 251 aaKnown RBP14.47□□□□□ -0.09
PCDHGA11-203ENST00000622044 DISP1Q96F81 1524 aa14.47□□□□□ -0.09
PCDHGA11-203ENST00000622044 CFAP53Q96M91 514 aa14.47□□□□□ -0.09
PCDHGA11-203ENST00000622044 MAGI1Q96QZ7 1491 aaPredicted RBP14.47□□□□□ -0.09
PCDHGA11-203ENST00000622044 TESK2Q96S53 571 aa14.46□□□□□ -0.09
PCDHGA11-203ENST00000622044 NPM1P06748 294 aaKnown RBP eCLIP14.46□□□□□ -0.1
PCDHGA11-203ENST00000622044 FAM43AQ8N2R8 423 aa14.46□□□□□ -0.1
PCDHGA11-203ENST00000622044 SMC4Q9NTJ3 1288 aa14.46□□□□□ -0.1
PCDHGA11-203ENST00000622044 PDZRN3Q9UPQ7 1066 aa14.46□□□□□ -0.1
PCDHGA11-203ENST00000622044 TRAK1Q9UPV9 953 aa14.46□□□□□ -0.1
PCDHGA11-203ENST00000622044 KDM2BQ8NHM5 1336 aa14.46□□□□□ -0.1
PCDHGA11-203ENST00000622044 NUTM2DQ5VT03 806 aaPredicted RBP14.45□□□□□ -0.1
PCDHGA11-203ENST00000622044 DNMT1P26358 1616 aaKnown RBP14.45□□□□□ -0.1
PCDHGA11-203ENST00000622044 TNNQ9UQP3 1299 aa14.44□□□□□ -0.1
PCDHGA11-203ENST00000622044 CEP170Q5SW79 1584 aa14.43□□□□□ -0.1
PCDHGA11-203ENST00000622044 ARID3AQ99856 593 aa14.43□□□□□ -0.1
PCDHGA11-203ENST00000622044 DMRT2Q9Y5R5 561 aa14.43□□□□□ -0.1
PCDHGA11-203ENST00000622044 MYH16Q9H6N6 1097 aa14.43□□□□□ -0.1
PCDHGA11-203ENST00000622044 KDM5CP41229 1560 aa14.42□□□□□ -0.1
PCDHGA11-203ENST00000622044 TPRNQ4KMQ1 711 aa14.42□□□□□ -0.1
PCDHGA11-203ENST00000622044 CFAP70Q5T0N1 1121 aa14.42□□□□□ -0.1
PCDHGA11-203ENST00000622044 VSIG10Q8N0Z9 540 aa14.42□□□□□ -0.1
PCDHGA11-203ENST00000622044 ZBTB7CA1YPR0 619 aa14.42□□□□□ -0.1
PCDHGA11-203ENST00000622044 KIF14Q15058 1648 aa14.42□□□□□ -0.1
PCDHGA11-203ENST00000622044 CYB5RLQ6IPT4 315 aa14.41□□□□□ -0.1
PCDHGA11-203ENST00000622044 TCP11L2Q8N4U5 519 aa14.41□□□□□ -0.1
PCDHGA11-203ENST00000622044 KIF3BO15066 747 aa14.4□□□□□ -0.1
PCDHGA11-203ENST00000622044 PANK2Q9BZ23 570 aa14.4□□□□□ -0.1
PCDHGA11-203ENST00000622044 C22orf23Q9BZE7 217 aa14.4□□□□□ -0.1
PCDHGA11-203ENST00000622044 TBC1D2Q9BYX2 928 aa14.4□□□□□ -0.1
PCDHGA11-203ENST00000622044 PRAG1Q86YV5 1406 aa14.39□□□□□ -0.11
PCDHGA11-203ENST00000622044 TRAK2O60296 914 aa14.39□□□□□ -0.11
PCDHGA11-203ENST00000622044 PLPPR3Q6T4P5 718 aa14.39□□□□□ -0.11
PCDHGA11-203ENST00000622044 WWC1Q8IX03 1113 aa14.39□□□□□ -0.11
PCDHGA11-203ENST00000622044 TSR2Q969E8 191 aaKnown RBP14.39□□□□□ -0.11
PCDHGA11-203ENST00000622044 AMER1Q5JTC6 1135 aaPredicted RBP14.39□□□□□ -0.11
PCDHGA11-203ENST00000622044 KIAA0556O60303 1618 aa14.38□□□□□ -0.11
PCDHGA11-203ENST00000622044 PDE3AQ14432 1141 aa14.38□□□□□ -0.11
PCDHGA11-203ENST00000622044 AFAP1Q8N556 730 aa14.38□□□□□ -0.11
PCDHGA11-203ENST00000622044 HSP90AA2PQ14568 343 aaPredicted RBP14.38□□□□□ -0.11
PCDHGA11-203ENST00000622044 RSPH4AQ5TD94 716 aa14.38□□□□□ -0.11
PCDHGA11-203ENST00000622044 UHRF1BP1Q6BDS2 1440 aa14.38□□□□□ -0.11
PCDHGA11-203ENST00000622044 LNPKQ9C0E8 428 aa14.38□□□□□ -0.11
PCDHGA11-203ENST00000622044 APBB1O00213 710 aa14.37□□□□□ -0.11
PCDHGA11-203ENST00000622044 PCDHB15Q9Y5E8 787 aa14.37□□□□□ -0.11
PCDHGA11-203ENST00000622044 RRAGDQ9NQL2 400 aaPredicted RBP14.36□□□□□ -0.11
PCDHGA11-203ENST00000622044 CHMP5Q9NZZ3 219 aa14.36□□□□□ -0.11
PCDHGA11-203ENST00000622044 MBD5Q9P267 1494 aa14.36□□□□□ -0.11
PCDHGA11-203ENST00000622044 ZKSCAN2Q63HK3 967 aa14.36□□□□□ -0.11
PCDHGA11-203ENST00000622044 OSCARQ8IYS5 282 aa14.36□□□□□ -0.11
PCDHGA11-203ENST00000622044 STK26Q9P289 416 aa14.36□□□□□ -0.11
PCDHGA11-203ENST00000622044 NKTRP30414 1462 aaKnown RBP14.36□□□□□ -0.11
PCDHGA11-203ENST00000622044 GOLGA6L22H0YM25 854 aa14.36□□□□□ -0.11
PCDHGA11-203ENST00000622044 ELL2O00472 640 aaPredicted RBP14.36□□□□□ -0.11
PCDHGA11-203ENST00000622044 MCM4P33991 863 aa14.36□□□□□ -0.11
PCDHGA11-203ENST00000622044 MTHFSP49914 203 aa14.36□□□□□ -0.11
PCDHGA11-203ENST00000622044 SLC12A5Q9H2X9 1139 aa14.36□□□□□ -0.11
PCDHGA11-203ENST00000622044 DZIP1LQ8IYY4 767 aaKnown RBP14.35□□□□□ -0.11
PCDHGA11-203ENST00000622044 EIF3AQ14152 1382 aaKnown RBP14.35□□□□□ -0.11
PCDHGA11-203ENST00000622044 RAPGEF6Q8TEU7 1601 aa14.34□□□□□ -0.11
PCDHGA11-203ENST00000622044 SPAG9O60271 1321 aaKnown RBP14.34□□□□□ -0.11
PCDHGA11-203ENST00000622044 RLBP1P12271 317 aa14.34□□□□□ -0.11
PCDHGA11-203ENST00000622044 ATP10BO94823 1461 aa14.34□□□□□ -0.11
PCDHGA11-203ENST00000622044 EFCAB2Q5VUJ9 269 aa14.34□□□□□ -0.11
PCDHGA11-203ENST00000622044 TMEM132EQ6IEE7 984 aa14.34□□□□□ -0.11
PCDHGA11-203ENST00000622044 RUNDC1Q96C34 613 aa14.34□□□□□ -0.11
PCDHGA11-203ENST00000622044 PLEKHH2Q8IVE3 1493 aa14.34□□□□□ -0.11
PCDHGA11-203ENST00000622044 UBE2Q2Q8WVN8 375 aa14.33□□□□□ -0.11
PCDHGA11-203ENST00000622044 RARSP54136 660 aaKnown RBP14.33□□□□□ -0.12
PCDHGA11-203ENST00000622044 SRPK2P78362 688 aaKnown RBP14.33□□□□□ -0.12
PCDHGA11-203ENST00000622044 XRCC6P12956 609 aaKnown RBP eCLIP14.33□□□□□ -0.12
PCDHGA11-203ENST00000622044 BLMP54132 1417 aaPredicted RBP14.33□□□□□ -0.12
PCDHGA11-203ENST00000622044 SLC24A1O60721 1099 aa14.32□□□□□ -0.12
PCDHGA11-203ENST00000622044 GGT6Q6P531 493 aa14.32□□□□□ -0.12
PCDHGA11-203ENST00000622044 GBP4Q96PP9 640 aa14.32□□□□□ -0.12
PCDHGA11-203ENST00000622044 NUP160Q12769 1436 aa14.32□□□□□ -0.12
PCDHGA11-203ENST00000622044 COL17A1Q9UMD9 1497 aaPredicted RBP14.31□□□□□ -0.12
PCDHGA11-203ENST00000622044 ARHGAP5Q13017 1502 aa14.31□□□□□ -0.12
PCDHGA11-203ENST00000622044 ZMYM4Q5VZL5 1548 aa14.31□□□□□ -0.12
PCDHGA11-203ENST00000622044 ANKRD45Q5TZF3 282 aa14.31□□□□□ -0.12
PCDHGA11-203ENST00000622044 ERCC6L2Q5T890 1561 aa14.31□□□□□ -0.12
PCDHGA11-203ENST00000622044 ARHGEF12Q9NZN5 1544 aa14.3□□□□□ -0.12
PCDHGA11-203ENST00000622044 EXOSC9Q06265 439 aaKnown RBP14.3□□□□□ -0.12
PCDHGA11-203ENST00000622044 FOXD4L5Q5VV16 416 aaPredicted RBP14.3□□□□□ -0.12
PCDHGA11-203ENST00000622044 FOXD4L4Q8WXT5 416 aaPredicted RBP14.3□□□□□ -0.12
PCDHGA11-203ENST00000622044 DDX11L8A8MPP1 907 aa14.3□□□□□ -0.12
PCDHGA11-203ENST00000622044 TBC1D32Q96NH3 1257 aa14.3□□□□□ -0.12
PCDHGA11-203ENST00000622044 FAM135AQ9P2D6 1515 aa14.29□□□□□ -0.12
PCDHGA11-203ENST00000622044 MSNP26038 577 aaKnown RBP14.29□□□□□ -0.12
PCDHGA11-203ENST00000622044 C1orf115Q9H7X2 142 aa14.29□□□□□ -0.12
PCDHGA11-203ENST00000622044 A2MP01023 1474 aa14.29□□□□□ -0.12
PCDHGA11-203ENST00000622044 CCDC141Q6ZP82 1450 aa14.28□□□□□ -0.12
PCDHGA11-203ENST00000622044 MRE11P49959 708 aa14.28□□□□□ -0.12
PCDHGA11-203ENST00000622044 KANK1Q14678 1352 aa14.28□□□□□ -0.12
PCDHGA11-203ENST00000622044 DDX49Q9Y6V7 483 aaKnown RBP14.28□□□□□ -0.12
PCDHGA11-203ENST00000622044 GRPEL1Q9HAV7 217 aa14.27□□□□□ -0.12
PCDHGA11-203ENST00000622044 MVPQ14764 893 aaKnown RBP14.27□□□□□ -0.13
PCDHGA11-203ENST00000622044 GGNBP2Q9H3C7 697 aa14.26□□□□□ -0.13
PCDHGA11-203ENST00000622044 ADGRL2O95490 1459 aa14.25□□□□□ -0.13
PCDHGA11-203ENST00000622044 CARD14Q9BXL6 1004 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms