RNA–Protein interactions for RNA: ENST00000620843.1

LPCAT3-213, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 5

Gene LPCAT3, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-213ENST00000620843 ZNF687Q8N1G0 1237 aa12.78□□□□□ -0.36
LPCAT3-213ENST00000620843 SLC4A5Q9BY07 1137 aa12.78□□□□□ -0.36
LPCAT3-213ENST00000620843 RABGEF1Q9UJ41 708 aa12.78□□□□□ -0.36
LPCAT3-213ENST00000620843 SEPT9Q9UHD8 586 aaPredicted RBP12.77□□□□□ -0.37
LPCAT3-213ENST00000620843 ATP1B4Q9UN42 357 aaPredicted RBP12.77□□□□□ -0.37
LPCAT3-213ENST00000620843 PROCA1Q8NCQ7 364 aaPredicted RBP12.76□□□□□ -0.37
LPCAT3-213ENST00000620843 DIXDC1Q155Q3 683 aa12.74□□□□□ -0.37
LPCAT3-213ENST00000620843 VPS9D1Q9Y2B5 631 aa12.74□□□□□ -0.37
LPCAT3-213ENST00000620843 CLK2P49760 499 aaKnown RBP12.73□□□□□ -0.37
LPCAT3-213ENST00000620843 RDH13Q8NBN7 331 aa12.73□□□□□ -0.37
LPCAT3-213ENST00000620843 SPIRE2Q8WWL2 714 aa12.73□□□□□ -0.37
LPCAT3-213ENST00000620843 HS3ST6Q96QI5 342 aa12.73□□□□□ -0.37
LPCAT3-213ENST00000620843 POTEB3A0JP26 581 aa12.72□□□□□ -0.37
LPCAT3-213ENST00000620843 POTEBQ6S5H4 581 aa12.72□□□□□ -0.37
LPCAT3-213ENST00000620843 SWT1Q5T5J6 900 aaKnown RBP12.71□□□□□ -0.37
LPCAT3-213ENST00000620843 NUTM1Q86Y26 1132 aa12.71□□□□□ -0.37
LPCAT3-213ENST00000620843 FAM98CQ17RN3 349 aaKnown RBP12.69□□□□□ -0.38
LPCAT3-213ENST00000620843 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.69□□□□□ -0.38
LPCAT3-213ENST00000620843 LIMD1Q9UGP4 676 aa12.68□□□□□ -0.38
LPCAT3-213ENST00000620843 FLIIQ13045 1269 aa12.67□□□□□ -0.38
LPCAT3-213ENST00000620843 RIC3Q7Z5B4 369 aa12.67□□□□□ -0.38
LPCAT3-213ENST00000620843 NBPF3Q9H094 633 aa12.67□□□□□ -0.38
LPCAT3-213ENST00000620843 HDGFP51858 240 aaKnown RBP12.66□□□□□ -0.38
LPCAT3-213ENST00000620843 LCE2DQ5TA82 110 aaPredicted RBP12.66□□□□□ -0.38
LPCAT3-213ENST00000620843 RSPH4AQ5TD94 716 aa12.66□□□□□ -0.38
LPCAT3-213ENST00000620843 SLC10A3P09131 477 aa12.65□□□□□ -0.38
LPCAT3-213ENST00000620843 MOXD2PA6NHM9 499 aa12.64□□□□□ -0.39
LPCAT3-213ENST00000620843 SPTLC1O15269 473 aa12.64□□□□□ -0.39
LPCAT3-213ENST00000620843 RSBN1LQ6PCB5 846 aaPredicted RBP12.64□□□□□ -0.39
LPCAT3-213ENST00000620843 LAPTM4BQ86VI4 370 aa12.64□□□□□ -0.39
LPCAT3-213ENST00000620843 ZMYND15Q9H091 742 aa12.64□□□□□ -0.39
LPCAT3-213ENST00000620843 BHMG1C9JSJ3 638 aaPredicted RBP12.63□□□□□ -0.39
LPCAT3-213ENST00000620843 TK2O00142 265 aa12.63□□□□□ -0.39
LPCAT3-213ENST00000620843 KDM4AO75164 1064 aa12.63□□□□□ -0.39
LPCAT3-213ENST00000620843 GCGRP47871 477 aa12.63□□□□□ -0.39
LPCAT3-213ENST00000620843 SAMD7Q7Z3H4 446 aa12.63□□□□□ -0.39
LPCAT3-213ENST00000620843 SUPT5HO00267 1087 aaKnown RBP12.62□□□□□ -0.39
LPCAT3-213ENST00000620843 NDUFV2P19404 249 aa12.62□□□□□ -0.39
LPCAT3-213ENST00000620843 LSM11P83369 360 aaKnown RBP eCLIP12.62□□□□□ -0.39
LPCAT3-213ENST00000620843 SLC4A3P48751 1232 aa12.61□□□□□ -0.39
LPCAT3-213ENST00000620843 CSPP1Q1MSJ5 1256 aa12.61□□□□□ -0.39
LPCAT3-213ENST00000620843 SLF2Q8IX21 1173 aa12.61□□□□□ -0.39
LPCAT3-213ENST00000620843 FBXO31Q5XUX0 539 aaPredicted RBP12.6□□□□□ -0.39
LPCAT3-213ENST00000620843 ADGRD1Q6QNK2 874 aa12.6□□□□□ -0.39
LPCAT3-213ENST00000620843 RNF40O75150 1001 aa12.59□□□□□ -0.39
LPCAT3-213ENST00000620843 RFC5P40937 340 aa12.59□□□□□ -0.39
LPCAT3-213ENST00000620843 MCM6Q14566 821 aa12.59□□□□□ -0.39
LPCAT3-213ENST00000620843 TUSC1Q2TAM9 212 aa12.59□□□□□ -0.39
LPCAT3-213ENST00000620843 MRPL50Q8N5N7 158 aaKnown RBP12.59□□□□□ -0.39
LPCAT3-213ENST00000620843 ZFRQ96KR1 1074 aaKnown RBP12.59□□□□□ -0.39
LPCAT3-213ENST00000620843 HOXA2O43364 376 aa12.58□□□□□ -0.4
LPCAT3-213ENST00000620843 USP46P62068 366 aa12.58□□□□□ -0.4
LPCAT3-213ENST00000620843 GJA5P36382 358 aa12.57□□□□□ -0.4
LPCAT3-213ENST00000620843 PCDHB15Q9Y5E8 787 aa12.57□□□□□ -0.4
LPCAT3-213ENST00000620843 QPCTQ16769 361 aa12.56□□□□□ -0.4
LPCAT3-213ENST00000620843 PPP2R2DQ66LE6 453 aa12.56□□□□□ -0.4
LPCAT3-213ENST00000620843 CFHP08603 1231 aa12.55□□□□□ -0.4
LPCAT3-213ENST00000620843 HLA-CQ95604 372 aa12.54□□□□□ -0.4
LPCAT3-213ENST00000620843 HRO43593 1189 aa12.53□□□□□ -0.4
LPCAT3-213ENST00000620843 LILRB3O75022 631 aa12.53□□□□□ -0.4
LPCAT3-213ENST00000620843 FDX1P10109 184 aa12.53□□□□□ -0.4
LPCAT3-213ENST00000620843 UBTFP17480 764 aaKnown RBP12.53□□□□□ -0.4
LPCAT3-213ENST00000620843 ANKRD13DQ6ZTN6 518 aa12.53□□□□□ -0.4
LPCAT3-213ENST00000620843 GUCA2AQ02747 115 aa12.52□□□□□ -0.41
LPCAT3-213ENST00000620843 CABLES1Q8TDN4 633 aa12.52□□□□□ -0.41
LPCAT3-213ENST00000620843 LRCH3Q96II8 777 aa12.52□□□□□ -0.41
LPCAT3-213ENST00000620843 FUT2Q10981 343 aa12.51□□□□□ -0.41
LPCAT3-213ENST00000620843 TMEM259Q4ZIN3 620 aa12.51□□□□□ -0.41
LPCAT3-213ENST00000620843 BANK1Q8NDB2 785 aa12.51□□□□□ -0.41
LPCAT3-213ENST00000620843 NUTM2BA6NNL0 878 aaPredicted RBP12.5□□□□□ -0.41
LPCAT3-213ENST00000620843 NUTM2EB1AL46 878 aaPredicted RBP12.5□□□□□ -0.41
LPCAT3-213ENST00000620843 RTL5Q5HYW3 569 aaPredicted RBP12.5□□□□□ -0.41
LPCAT3-213ENST00000620843 NUTM2DQ5VT03 806 aaPredicted RBP12.5□□□□□ -0.41
LPCAT3-213ENST00000620843 NUTM2AQ8IVF1 878 aaPredicted RBP12.5□□□□□ -0.41
LPCAT3-213ENST00000620843 CLUAP1Q96AJ1 413 aa12.5□□□□□ -0.41
LPCAT3-213ENST00000620843 STAC3Q96MF2 364 aa12.5□□□□□ -0.41
LPCAT3-213ENST00000620843 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.5□□□□□ -0.41
LPCAT3-213ENST00000620843 PCDHGC3Q9UN70 934 aa12.5□□□□□ -0.41
LPCAT3-213ENST00000620843 SPDYE5A6NIY4 337 aa12.49□□□□□ -0.41
LPCAT3-213ENST00000620843 PRPF38BQ5VTL8 546 aaKnown RBP12.49□□□□□ -0.41
LPCAT3-213ENST00000620843 ZBTB3Q9H5J0 574 aa12.49□□□□□ -0.41
LPCAT3-213ENST00000620843 SNRKQ9NRH2 765 aa12.49□□□□□ -0.41
LPCAT3-213ENST00000620843 GOLGA8CPA6NN73 597 aa12.48□□□□□ -0.41
LPCAT3-213ENST00000620843 HRCP23327 699 aa12.48□□□□□ -0.41
LPCAT3-213ENST00000620843 KMT5BQ4FZB7 885 aa12.48□□□□□ -0.41
LPCAT3-213ENST00000620843 GRIPAP1Q4V328 841 aa12.48□□□□□ -0.41
LPCAT3-213ENST00000620843 ANKK1Q8NFD2 765 aa12.47□□□□□ -0.41
LPCAT3-213ENST00000620843 NECTIN2Q92692 538 aa12.46□□□□□ -0.41
LPCAT3-213ENST00000620843 A6NJR5 290 aa12.45□□□□□ -0.42
LPCAT3-213ENST00000620843 AP1G2O75843 785 aa12.45□□□□□ -0.42
LPCAT3-213ENST00000620843 ATP6V1AP38606 617 aa12.45□□□□□ -0.42
LPCAT3-213ENST00000620843 POM121Q96HA1 1249 aa12.44□□□□□ -0.42
LPCAT3-213ENST00000620843 MTMR2Q13614 643 aa12.43□□□□□ -0.42
LPCAT3-213ENST00000620843 SOWAHBA6NEL2 793 aa12.42□□□□□ -0.42
LPCAT3-213ENST00000620843 ACTN4O43707 911 aaKnown RBP12.42□□□□□ -0.42
LPCAT3-213ENST00000620843 BCAMP50895 628 aa12.42□□□□□ -0.42
LPCAT3-213ENST00000620843 C6orf229H3BNL8 230 aa12.41□□□□□ -0.42
LPCAT3-213ENST00000620843 RAD21O60216 631 aa12.41□□□□□ -0.42
LPCAT3-213ENST00000620843 MTMR14Q8NCE2 650 aa12.41□□□□□ -0.42
LPCAT3-213ENST00000620843 HPS5Q9UPZ3 1129 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms