RNA–Protein interactions for RNA: ENST00000620724.4

SGPL1-208, Transcript of sphingosine-1-phosphate lyase 1, humanhuman

TSL 5

Gene SGPL1, Length 868 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPL1-208ENST00000620724 GCC2Q8IWJ2 1684 aa16.69■□□□□ 0.26
SGPL1-208ENST00000620724 NUP155O75694 1391 aa16.67■□□□□ 0.26
SGPL1-208ENST00000620724 RBM33Q96EV2 1170 aaKnown RBP16.67■□□□□ 0.26
SGPL1-208ENST00000620724 ZFYVE9O95405 1425 aa16.66■□□□□ 0.26
SGPL1-208ENST00000620724 TMEM131LA2VDJ0 1609 aa16.66■□□□□ 0.26
SGPL1-208ENST00000620724 IQGAP3Q86VI3 1631 aa16.66■□□□□ 0.26
SGPL1-208ENST00000620724 RRBP1Q9P2E9 1410 aaKnown RBP16.64■□□□□ 0.25
SGPL1-208ENST00000620724 KCNA6P17658 529 aa16.64■□□□□ 0.25
SGPL1-208ENST00000620724 NUTM2DQ5VT03 806 aaPredicted RBP16.64■□□□□ 0.25
SGPL1-208ENST00000620724 RIMS2Q9UQ26 1411 aa16.63■□□□□ 0.25
SGPL1-208ENST00000620724 CHGAP10645 457 aaKnown RBP16.63■□□□□ 0.25
SGPL1-208ENST00000620724 TMEM94Q12767 1356 aa16.61■□□□□ 0.25
SGPL1-208ENST00000620724 PROSER2Q86WR7 435 aaPredicted RBP16.6■□□□□ 0.25
SGPL1-208ENST00000620724 BCANQ96GW7 911 aa16.6■□□□□ 0.25
SGPL1-208ENST00000620724 PLEKHG1Q9ULL1 1385 aa16.59■□□□□ 0.25
SGPL1-208ENST00000620724 NAIPQ13075 1403 aa16.59■□□□□ 0.25
SGPL1-208ENST00000620724 NWD1Q149M9 1564 aa16.56■□□□□ 0.24
SGPL1-208ENST00000620724 ADAMTS13Q76LX8 1427 aa16.56■□□□□ 0.24
SGPL1-208ENST00000620724 TBX22Q9Y458 520 aa16.56■□□□□ 0.24
SGPL1-208ENST00000620724 CHD2O14647 1828 aaKnown RBP16.56■□□□□ 0.24
SGPL1-208ENST00000620724 PPP1R15AO75807 674 aaPredicted RBP16.55■□□□□ 0.24
SGPL1-208ENST00000620724 MED1Q15648 1581 aaPredicted RBP16.54■□□□□ 0.24
SGPL1-208ENST00000620724 HRCP23327 699 aa16.53■□□□□ 0.24
SGPL1-208ENST00000620724 HDGFP51858 240 aaKnown RBP16.53■□□□□ 0.24
SGPL1-208ENST00000620724 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.53■□□□□ 0.24
SGPL1-208ENST00000620724 SOCS7O14512 581 aa16.52■□□□□ 0.24
SGPL1-208ENST00000620724 SPHKAPQ2M3C7 1700 aa16.52■□□□□ 0.24
SGPL1-208ENST00000620724 FAM135BQ49AJ0 1406 aa16.51■□□□□ 0.23
SGPL1-208ENST00000620724 PTPRUQ92729 1446 aa16.51■□□□□ 0.23
SGPL1-208ENST00000620724 NKTRP30414 1462 aaKnown RBP16.5■□□□□ 0.23
SGPL1-208ENST00000620724 CLTCL1P53675 1640 aa16.49■□□□□ 0.23
SGPL1-208ENST00000620724 HFM1A2PYH4 1435 aa16.48■□□□□ 0.23
SGPL1-208ENST00000620724 TRIM52Q96A61 297 aa16.48■□□□□ 0.23
SGPL1-208ENST00000620724 NRXN3Q9Y4C0 1643 aa16.48■□□□□ 0.23
SGPL1-208ENST00000620724 ROBO1Q9Y6N7 1651 aa16.46■□□□□ 0.23
SGPL1-208ENST00000620724 ZNF326Q5BKZ1 582 aaKnown RBP16.46■□□□□ 0.23
SGPL1-208ENST00000620724 SLAIN2Q9P270 581 aa16.46■□□□□ 0.23
SGPL1-208ENST00000620724 AMOTL2Q9Y2J4 779 aa16.46■□□□□ 0.23
SGPL1-208ENST00000620724 FOXD1Q16676 465 aa16.45■□□□□ 0.22
SGPL1-208ENST00000620724 MSH6P52701 1360 aa16.44■□□□□ 0.22
SGPL1-208ENST00000620724 RGS17Q9UGC6 210 aaPredicted RBP16.44■□□□□ 0.22
SGPL1-208ENST00000620724 TRPM2O94759 1503 aa16.44■□□□□ 0.22
SGPL1-208ENST00000620724 METP08581 1390 aa16.43■□□□□ 0.22
SGPL1-208ENST00000620724 NEXMIFQ5QGS0 1516 aa16.43■□□□□ 0.22
SGPL1-208ENST00000620724 DIP2AQ14689 1571 aa16.43■□□□□ 0.22
SGPL1-208ENST00000620724 PIK3R4Q99570 1358 aa16.42■□□□□ 0.22
SGPL1-208ENST00000620724 SLC4A1APQ9BWU0 796 aaKnown RBP16.42■□□□□ 0.22
SGPL1-208ENST00000620724 SETBP1Q9Y6X0 1596 aa16.41■□□□□ 0.22
SGPL1-208ENST00000620724 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.41■□□□□ 0.22
SGPL1-208ENST00000620724 NCOA3Q9Y6Q9 1424 aa16.4■□□□□ 0.22
SGPL1-208ENST00000620724 KIF1BO60333 1816 aa16.4■□□□□ 0.22
SGPL1-208ENST00000620724 ZEB1P37275 1124 aaPredicted RBP16.39■□□□□ 0.21
SGPL1-208ENST00000620724 C19orf44Q9H6X5 657 aa16.39■□□□□ 0.21
SGPL1-208ENST00000620724 C14orf37Q86TY3 774 aa16.38■□□□□ 0.21
SGPL1-208ENST00000620724 XRN1Q8IZH2 1706 aaKnown RBP16.38■□□□□ 0.21
SGPL1-208ENST00000620724 MPHOSPH9Q99550 1183 aa16.35■□□□□ 0.21
SGPL1-208ENST00000620724 PHLPP1O60346 1717 aa16.35■□□□□ 0.21
SGPL1-208ENST00000620724 ATF3P18847 181 aa16.34■□□□□ 0.21
SGPL1-208ENST00000620724 CADPS2Q86UW7 1296 aa16.34■□□□□ 0.21
SGPL1-208ENST00000620724 CCER1Q8TC90 406 aaPredicted RBP16.33■□□□□ 0.2
SGPL1-208ENST00000620724 SETD1AO15047 1707 aaKnown RBP16.33■□□□□ 0.2
SGPL1-208ENST00000620724 COL16A1Q07092 1604 aaPredicted RBP16.32■□□□□ 0.2
SGPL1-208ENST00000620724 POTEAQ6S8J7 498 aa16.32■□□□□ 0.2
SGPL1-208ENST00000620724 BRINP3Q76B58 766 aa16.32■□□□□ 0.2
SGPL1-208ENST00000620724 VGFO15240 615 aaPredicted RBP16.31■□□□□ 0.2
SGPL1-208ENST00000620724 PPLO60437 1756 aa16.31■□□□□ 0.2
SGPL1-208ENST00000620724 RPGRIP1LQ68CZ1 1315 aa16.3■□□□□ 0.2
SGPL1-208ENST00000620724 MST1RQ04912 1400 aa16.29■□□□□ 0.2
SGPL1-208ENST00000620724 ROBO2Q9HCK4 1378 aa16.29■□□□□ 0.2
SGPL1-208ENST00000620724 ADGRF5Q8IZF2 1346 aa16.29■□□□□ 0.2
SGPL1-208ENST00000620724 RGL3Q3MIN7 710 aa16.29■□□□□ 0.2
SGPL1-208ENST00000620724 DDX17Q92841 729 aaKnown RBP16.29■□□□□ 0.2
SGPL1-208ENST00000620724 JCADQ9P266 1359 aa16.28■□□□□ 0.2
SGPL1-208ENST00000620724 SPATA31E1Q6ZUB1 1445 aa16.28■□□□□ 0.2
SGPL1-208ENST00000620724 AHDC1Q5TGY3 1603 aaPredicted RBP16.27■□□□□ 0.2
SGPL1-208ENST00000620724 NALCNQ8IZF0 1738 aa16.27■□□□□ 0.19
SGPL1-208ENST00000620724 DCCP43146 1447 aa16.27■□□□□ 0.19
SGPL1-208ENST00000620724 SETD5Q9C0A6 1442 aa16.26■□□□□ 0.19
SGPL1-208ENST00000620724 ADGRL3Q9HAR2 1447 aa16.26■□□□□ 0.19
SGPL1-208ENST00000620724 LRP6O75581 1613 aa16.26■□□□□ 0.19
SGPL1-208ENST00000620724 CCDC144AA2RUR9 1427 aa16.24■□□□□ 0.19
SGPL1-208ENST00000620724 ASXL1Q8IXJ9 1541 aa16.24■□□□□ 0.19
SGPL1-208ENST00000620724 TMEM132EQ6IEE7 984 aa16.22■□□□□ 0.19
SGPL1-208ENST00000620724 ORAI2Q96SN7 254 aa16.22■□□□□ 0.19
SGPL1-208ENST00000620724 RAB3GAP2Q9H2M9 1393 aa16.22■□□□□ 0.19
SGPL1-208ENST00000620724 IFT172Q9UG01 1749 aa16.22■□□□□ 0.19
SGPL1-208ENST00000620724 PTCH1Q13635 1447 aa16.21■□□□□ 0.19
SGPL1-208ENST00000620724 C1orf167Q5SNV9 1468 aa16.21■□□□□ 0.19
SGPL1-208ENST00000620724 PRAG1Q86YV5 1406 aa16.2■□□□□ 0.18
SGPL1-208ENST00000620724 NHSL1Q5SYE7 1610 aa16.2■□□□□ 0.18
SGPL1-208ENST00000620724 SPATA31A6Q5VVP1 1343 aa16.19■□□□□ 0.18
SGPL1-208ENST00000620724 SHPRHQ149N8 1683 aa16.19■□□□□ 0.18
SGPL1-208ENST00000620724 WAPLQ7Z5K2 1190 aa16.19■□□□□ 0.18
SGPL1-208ENST00000620724 STK26Q9P289 416 aa16.19■□□□□ 0.18
SGPL1-208ENST00000620724 NUTM2BA6NNL0 878 aaPredicted RBP16.18■□□□□ 0.18
SGPL1-208ENST00000620724 NUTM2EB1AL46 878 aaPredicted RBP16.18■□□□□ 0.18
SGPL1-208ENST00000620724 NUTM2AQ8IVF1 878 aaPredicted RBP16.18■□□□□ 0.18
SGPL1-208ENST00000620724 ANKRD30BQ9BXX2 1392 aa16.17■□□□□ 0.18
SGPL1-208ENST00000620724 PLEKHH1Q9ULM0 1364 aa16.17■□□□□ 0.18
SGPL1-208ENST00000620724 PIK3C2GO75747 1445 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms