RNA–Protein interactions for RNA: ENST00000620309.4

PSMB3-212, Transcript of proteasome subunit beta 3, humanhuman

TSL 2

Gene PSMB3, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-212ENST00000620309 ERVK-7P63135 1459 aa10.49□□□□□ -0.73
PSMB3-212ENST00000620309 FBXO31Q5XUX0 539 aaPredicted RBP10.49□□□□□ -0.73
PSMB3-212ENST00000620309 ANKLE2Q86XL3 938 aa10.49□□□□□ -0.73
PSMB3-212ENST00000620309 NUP155O75694 1391 aa10.49□□□□□ -0.73
PSMB3-212ENST00000620309 KIF1BO60333 1816 aa10.49□□□□□ -0.73
PSMB3-212ENST00000620309 MYO5BQ9ULV0 1848 aa10.49□□□□□ -0.73
PSMB3-212ENST00000620309 FAM135BQ49AJ0 1406 aa10.49□□□□□ -0.73
PSMB3-212ENST00000620309 UBR1Q8IWV7 1749 aa10.48□□□□□ -0.73
PSMB3-212ENST00000620309 THEMISQ8N1K5 641 aaPredicted RBP10.46□□□□□ -0.73
PSMB3-212ENST00000620309 ROBO1Q9Y6N7 1651 aa10.45□□□□□ -0.74
PSMB3-212ENST00000620309 ADGRB3O60242 1522 aa10.45□□□□□ -0.74
PSMB3-212ENST00000620309 NOS1P29475 1434 aa10.45□□□□□ -0.74
PSMB3-212ENST00000620309 SENP3Q9H4L4 574 aaPredicted RBP10.44□□□□□ -0.74
PSMB3-212ENST00000620309 UPF1Q92900 1129 aaKnown RBP eCLIP10.43□□□□□ -0.74
PSMB3-212ENST00000620309 PPLO60437 1756 aa10.43□□□□□ -0.74
PSMB3-212ENST00000620309 ARHGAP23Q9P227 1491 aa10.42□□□□□ -0.74
PSMB3-212ENST00000620309 STAG3Q9UJ98 1225 aa10.42□□□□□ -0.74
PSMB3-212ENST00000620309 TMEM131LA2VDJ0 1609 aa10.42□□□□□ -0.74
PSMB3-212ENST00000620309 ANKRD30BQ9BXX2 1392 aa10.41□□□□□ -0.74
PSMB3-212ENST00000620309 TRIM52Q96A61 297 aa10.41□□□□□ -0.74
PSMB3-212ENST00000620309 MPHOSPH9Q99550 1183 aa10.41□□□□□ -0.74
PSMB3-212ENST00000620309 SLIT1O75093 1534 aa10.41□□□□□ -0.74
PSMB3-212ENST00000620309 CLSPNQ9HAW4 1339 aa10.4□□□□□ -0.74
PSMB3-212ENST00000620309 SLC4A1APQ9BWU0 796 aaKnown RBP10.4□□□□□ -0.74
PSMB3-212ENST00000620309 SCAF11Q99590 1463 aaKnown RBP10.4□□□□□ -0.74
PSMB3-212ENST00000620309 COL16A1Q07092 1604 aaPredicted RBP10.39□□□□□ -0.75
PSMB3-212ENST00000620309 PHLPP1O60346 1717 aa10.38□□□□□ -0.75
PSMB3-212ENST00000620309 SLC52A1Q9NWF4 448 aa10.38□□□□□ -0.75
PSMB3-212ENST00000620309 CCDC144AA2RUR9 1427 aa10.38□□□□□ -0.75
PSMB3-212ENST00000620309 LRP6O75581 1613 aa10.37□□□□□ -0.75
PSMB3-212ENST00000620309 SPATA31E1Q6ZUB1 1445 aa10.37□□□□□ -0.75
PSMB3-212ENST00000620309 NEXMIFQ5QGS0 1516 aa10.37□□□□□ -0.75
PSMB3-212ENST00000620309 FOXD1Q16676 465 aa10.36□□□□□ -0.75
PSMB3-212ENST00000620309 CDK12Q9NYV4 1490 aaPredicted RBP10.36□□□□□ -0.75
PSMB3-212ENST00000620309 NWD1Q149M9 1564 aa10.35□□□□□ -0.75
PSMB3-212ENST00000620309 LTKP29376 864 aa10.35□□□□□ -0.75
PSMB3-212ENST00000620309 EID1Q9Y6B2 187 aa10.35□□□□□ -0.75
PSMB3-212ENST00000620309 LAMC1P11047 1609 aa10.34□□□□□ -0.75
PSMB3-212ENST00000620309 HDGFP51858 240 aaKnown RBP10.34□□□□□ -0.75
PSMB3-212ENST00000620309 TMEM94Q12767 1356 aa10.34□□□□□ -0.75
PSMB3-212ENST00000620309 JCADQ9P266 1359 aa10.34□□□□□ -0.75
PSMB3-212ENST00000620309 SHPRHQ149N8 1683 aa10.34□□□□□ -0.75
PSMB3-212ENST00000620309 KIAA1210Q9ULL0 1709 aa10.33□□□□□ -0.76
PSMB3-212ENST00000620309 CCER1Q8TC90 406 aaPredicted RBP10.33□□□□□ -0.76
PSMB3-212ENST00000620309 MYOM2P54296 1465 aa10.33□□□□□ -0.76
PSMB3-212ENST00000620309 DIP2AQ14689 1571 aa10.33□□□□□ -0.76
PSMB3-212ENST00000620309 TRPM1Q7Z4N2 1603 aa10.33□□□□□ -0.76
PSMB3-212ENST00000620309 NRXN3Q9Y4C0 1643 aa10.33□□□□□ -0.76
PSMB3-212ENST00000620309 CHGAP10645 457 aaKnown RBP10.32□□□□□ -0.76
PSMB3-212ENST00000620309 NKTRP30414 1462 aaKnown RBP10.31□□□□□ -0.76
PSMB3-212ENST00000620309 TMEM2Q9UHN6 1383 aa10.31□□□□□ -0.76
PSMB3-212ENST00000620309 PPP1R15AO75807 674 aaPredicted RBP10.31□□□□□ -0.76
PSMB3-212ENST00000620309 NRXN1Q9ULB1 1477 aa10.3□□□□□ -0.76
PSMB3-212ENST00000620309 AHDC1Q5TGY3 1603 aaPredicted RBP10.29□□□□□ -0.76
PSMB3-212ENST00000620309 IDI1Q13907 227 aa10.29□□□□□ -0.76
PSMB3-212ENST00000620309 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.29□□□□□ -0.76
PSMB3-212ENST00000620309 ZFYVE9O95405 1425 aa10.29□□□□□ -0.76
PSMB3-212ENST00000620309 SPATA31A6Q5VVP1 1343 aa10.29□□□□□ -0.76
PSMB3-212ENST00000620309 RIMS2Q9UQ26 1411 aa10.28□□□□□ -0.76
PSMB3-212ENST00000620309 KCNA6P17658 529 aa10.28□□□□□ -0.76
PSMB3-212ENST00000620309 ZNF772Q68DY9 489 aaPredicted RBP10.28□□□□□ -0.76
PSMB3-212ENST00000620309 CHD2O14647 1828 aaKnown RBP10.28□□□□□ -0.76
PSMB3-212ENST00000620309 EP400Q96L91 3159 aa10.28□□□□□ -0.76
PSMB3-212ENST00000620309 SETBP1Q9Y6X0 1596 aa10.27□□□□□ -0.76
PSMB3-212ENST00000620309 ZNF326Q5BKZ1 582 aaKnown RBP10.27□□□□□ -0.77
PSMB3-212ENST00000620309 TXNDC2Q86VQ3 553 aa10.27□□□□□ -0.77
PSMB3-212ENST00000620309 BCANQ96GW7 911 aa10.27□□□□□ -0.77
PSMB3-212ENST00000620309 SIN3AQ96ST3 1273 aa10.27□□□□□ -0.77
PSMB3-212ENST00000620309 KNDC1Q76NI1 1749 aa10.26□□□□□ -0.77
PSMB3-212ENST00000620309 ASXL1Q8IXJ9 1541 aa10.26□□□□□ -0.77
PSMB3-212ENST00000620309 TONSLQ96HA7 1378 aa10.26□□□□□ -0.77
PSMB3-212ENST00000620309 RGS12O14924 1447 aa10.25□□□□□ -0.77
PSMB3-212ENST00000620309 RALGAPBQ86X10 1494 aa10.25□□□□□ -0.77
PSMB3-212ENST00000620309 SLAIN2Q9P270 581 aa10.25□□□□□ -0.77
PSMB3-212ENST00000620309 PLEKHG1Q9ULL1 1385 aa10.25□□□□□ -0.77
PSMB3-212ENST00000620309 PIK3C2GO75747 1445 aa10.24□□□□□ -0.77
PSMB3-212ENST00000620309 PRAG1Q86YV5 1406 aa10.24□□□□□ -0.77
PSMB3-212ENST00000620309 RXRBP28702 533 aa10.24□□□□□ -0.77
PSMB3-212ENST00000620309 ARHGEF28Q8N1W1 1705 aaKnown RBP10.24□□□□□ -0.77
PSMB3-212ENST00000620309 RBM33Q96EV2 1170 aaKnown RBP10.23□□□□□ -0.77
PSMB3-212ENST00000620309 MSH6P52701 1360 aa10.23□□□□□ -0.77
PSMB3-212ENST00000620309 ADGRB1O14514 1584 aa10.22□□□□□ -0.77
PSMB3-212ENST00000620309 RPGRIP1LQ68CZ1 1315 aa10.22□□□□□ -0.77
PSMB3-212ENST00000620309 NCOA3Q9Y6Q9 1424 aa10.22□□□□□ -0.77
PSMB3-212ENST00000620309 XRN1Q8IZH2 1706 aaKnown RBP10.21□□□□□ -0.77
PSMB3-212ENST00000620309 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.21□□□□□ -0.77
PSMB3-212ENST00000620309 PROSER2Q86WR7 435 aaPredicted RBP10.21□□□□□ -0.77
PSMB3-212ENST00000620309 VGFO15240 615 aaPredicted RBP10.2□□□□□ -0.78
PSMB3-212ENST00000620309 NEUROD1Q13562 356 aa10.2□□□□□ -0.78
PSMB3-212ENST00000620309 PIK3R4Q99570 1358 aa10.2□□□□□ -0.78
PSMB3-212ENST00000620309 TIMELESSQ9UNS1 1208 aa10.2□□□□□ -0.78
PSMB3-212ENST00000620309 NHSL1Q5SYE7 1610 aa10.19□□□□□ -0.78
PSMB3-212ENST00000620309 L3MBTL2Q969R5 705 aa10.19□□□□□ -0.78
PSMB3-212ENST00000620309 SLC26A8Q96RN1 970 aa10.19□□□□□ -0.78
PSMB3-212ENST00000620309 AFF2P51816 1311 aa10.17□□□□□ -0.78
PSMB3-212ENST00000620309 MEX3CQ5U5Q3 659 aaKnown RBP10.17□□□□□ -0.78
PSMB3-212ENST00000620309 QRICH2Q9H0J4 1663 aa10.17□□□□□ -0.78
PSMB3-212ENST00000620309 ADAMTS13Q76LX8 1427 aa10.16□□□□□ -0.78
PSMB3-212ENST00000620309 GPRASP1Q5JY77 1395 aa10.16□□□□□ -0.78
PSMB3-212ENST00000620309 LRP5O75197 1615 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms