RNA–Protein interactions for RNA: ENST00000619178.1

SNORD3D-201, Transcript of small nucleolar RNA, C/D box 3D, humanhuman

BASIC

Gene SNORD3D, Length 218 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3D-201ENST00000619178 THEMISQ8N1K5 641 aaPredicted RBP15.81■□□□□ 0.12
SNORD3D-201ENST00000619178 RGL3Q3MIN7 710 aa15.8■□□□□ 0.12
SNORD3D-201ENST00000619178 NEXMIFQ5QGS0 1516 aa15.79■□□□□ 0.12
SNORD3D-201ENST00000619178 KDM4FA0A1W2PPD8 638 aa15.79■□□□□ 0.12
SNORD3D-201ENST00000619178 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.79■□□□□ 0.12
SNORD3D-201ENST00000619178 VGFO15240 615 aaPredicted RBP15.78■□□□□ 0.12
SNORD3D-201ENST00000619178 DCAF11Q8TEB1 546 aa15.78■□□□□ 0.12
SNORD3D-201ENST00000619178 L3MBTL2Q969R5 705 aa15.78■□□□□ 0.12
SNORD3D-201ENST00000619178 SLIT1O75093 1534 aa15.78■□□□□ 0.12
SNORD3D-201ENST00000619178 TRPM1Q7Z4N2 1603 aa15.77■□□□□ 0.12
SNORD3D-201ENST00000619178 ZFYVE9O95405 1425 aa15.77■□□□□ 0.11
SNORD3D-201ENST00000619178 EID1Q9Y6B2 187 aa15.76■□□□□ 0.11
SNORD3D-201ENST00000619178 PPP1R15AO75807 674 aaPredicted RBP15.74■□□□□ 0.11
SNORD3D-201ENST00000619178 RIMS2Q9UQ26 1411 aa15.74■□□□□ 0.11
SNORD3D-201ENST00000619178 TMEM2Q9UHN6 1383 aa15.74■□□□□ 0.11
SNORD3D-201ENST00000619178 ARHGAP23Q9P227 1491 aa15.73■□□□□ 0.11
SNORD3D-201ENST00000619178 KDM2AQ9Y2K7 1162 aa15.73■□□□□ 0.11
SNORD3D-201ENST00000619178 IQGAP1P46940 1657 aa15.71■□□□□ 0.11
SNORD3D-201ENST00000619178 NRXN1Q9ULB1 1477 aa15.71■□□□□ 0.1
SNORD3D-201ENST00000619178 DIP2AQ14689 1571 aa15.7■□□□□ 0.1
SNORD3D-201ENST00000619178 PRAG1Q86YV5 1406 aa15.7■□□□□ 0.1
SNORD3D-201ENST00000619178 SCAF11Q99590 1463 aaKnown RBP15.7■□□□□ 0.1
SNORD3D-201ENST00000619178 SETBP1Q9Y6X0 1596 aa15.7■□□□□ 0.1
SNORD3D-201ENST00000619178 RALGAPBQ86X10 1494 aa15.68■□□□□ 0.1
SNORD3D-201ENST00000619178 ANKLE2Q86XL3 938 aa15.68■□□□□ 0.1
SNORD3D-201ENST00000619178 PIK3C2GO75747 1445 aa15.68■□□□□ 0.1
SNORD3D-201ENST00000619178 SETD1AO15047 1707 aaKnown RBP15.67■□□□□ 0.1
SNORD3D-201ENST00000619178 TXNDC2Q86VQ3 553 aa15.66■□□□□ 0.1
SNORD3D-201ENST00000619178 LMTK3Q96Q04 1460 aa15.65■□□□□ 0.1
SNORD3D-201ENST00000619178 PLEKHG1Q9ULL1 1385 aa15.65■□□□□ 0.1
SNORD3D-201ENST00000619178 BCANQ96GW7 911 aa15.65■□□□□ 0.1
SNORD3D-201ENST00000619178 ALKQ9UM73 1620 aa15.65■□□□□ 0.1
SNORD3D-201ENST00000619178 NRXN3Q9Y4C0 1643 aa15.65■□□□□ 0.1
SNORD3D-201ENST00000619178 KNDC1Q76NI1 1749 aa15.64■□□□□ 0.09
SNORD3D-201ENST00000619178 ROCK2O75116 1388 aaKnown RBP15.63■□□□□ 0.09
SNORD3D-201ENST00000619178 CHD2O14647 1828 aaKnown RBP15.63■□□□□ 0.09
SNORD3D-201ENST00000619178 ADGRF5Q8IZF2 1346 aa15.63■□□□□ 0.09
SNORD3D-201ENST00000619178 STRCQ7RTU9 1775 aa15.62■□□□□ 0.09
SNORD3D-201ENST00000619178 MED14O60244 1454 aa15.62■□□□□ 0.09
SNORD3D-201ENST00000619178 EIF3AQ14152 1382 aaKnown RBP15.61■□□□□ 0.09
SNORD3D-201ENST00000619178 AEBP2Q6ZN18 517 aaPredicted RBP15.6■□□□□ 0.09
SNORD3D-201ENST00000619178 C14orf93Q9H972 538 aaKnown RBP15.6■□□□□ 0.09
SNORD3D-201ENST00000619178 ARHGEF28Q8N1W1 1705 aaKnown RBP15.6■□□□□ 0.09
SNORD3D-201ENST00000619178 NBPF8Q3BBV2 869 aa15.59■□□□□ 0.09
SNORD3D-201ENST00000619178 NUTM2DQ5VT03 806 aaPredicted RBP15.59■□□□□ 0.09
SNORD3D-201ENST00000619178 GPRASP1Q5JY77 1395 aa15.59■□□□□ 0.09
SNORD3D-201ENST00000619178 NPHP4O75161 1426 aaPredicted RBP15.59■□□□□ 0.09
SNORD3D-201ENST00000619178 CARD11Q9BXL7 1154 aa15.58■□□□□ 0.08
SNORD3D-201ENST00000619178 LTKP29376 864 aa15.57■□□□□ 0.08
SNORD3D-201ENST00000619178 PIK3R4Q99570 1358 aa15.57■□□□□ 0.08
SNORD3D-201ENST00000619178 SLC24A1O60721 1099 aa15.56■□□□□ 0.08
SNORD3D-201ENST00000619178 DMRT2Q9Y5R5 561 aa15.56■□□□□ 0.08
SNORD3D-201ENST00000619178 QRICH2Q9H0J4 1663 aa15.56■□□□□ 0.08
SNORD3D-201ENST00000619178 ADGRB1O14514 1584 aa15.55■□□□□ 0.08
SNORD3D-201ENST00000619178 EIF4G2P78344 907 aaKnown RBP eCLIP15.55■□□□□ 0.08
SNORD3D-201ENST00000619178 CFAP70Q5T0N1 1121 aa15.55■□□□□ 0.08
SNORD3D-201ENST00000619178 TBX22Q9Y458 520 aa15.55■□□□□ 0.08
SNORD3D-201ENST00000619178 ADAMTS13Q76LX8 1427 aa15.53■□□□□ 0.08
SNORD3D-201ENST00000619178 DLC1Q96QB1 1528 aa15.53■□□□□ 0.08
SNORD3D-201ENST00000619178 XRN1Q8IZH2 1706 aaKnown RBP15.52■□□□□ 0.08
SNORD3D-201ENST00000619178 CPS1P31327 1500 aa15.52■□□□□ 0.07
SNORD3D-201ENST00000619178 YTHDC2Q9H6S0 1430 aaKnown RBP15.51■□□□□ 0.07
SNORD3D-201ENST00000619178 USP47Q96K76 1375 aa15.51■□□□□ 0.07
SNORD3D-201ENST00000619178 HSPA2P54652 639 aa15.51■□□□□ 0.07
SNORD3D-201ENST00000619178 ASXL1Q8IXJ9 1541 aa15.51■□□□□ 0.07
SNORD3D-201ENST00000619178 NCKAP5LQ9HCH0 1330 aa15.5■□□□□ 0.07
SNORD3D-201ENST00000619178 NBPF1Q3BBV0 1214 aa15.5■□□□□ 0.07
SNORD3D-201ENST00000619178 LRPPRCP42704 1394 aaKnown RBP15.49■□□□□ 0.07
SNORD3D-201ENST00000619178 NWD1Q149M9 1564 aa15.49■□□□□ 0.07
SNORD3D-201ENST00000619178 SLC26A8Q96RN1 970 aa15.48■□□□□ 0.07
SNORD3D-201ENST00000619178 TECPR2O15040 1411 aa15.48■□□□□ 0.07
SNORD3D-201ENST00000619178 ABCC11Q96J66 1382 aa15.48■□□□□ 0.07
SNORD3D-201ENST00000619178 FAM135BQ49AJ0 1406 aa15.46■□□□□ 0.07
SNORD3D-201ENST00000619178 TMEM132EQ6IEE7 984 aa15.46■□□□□ 0.07
SNORD3D-201ENST00000619178 SIRT1Q96EB6 747 aa15.46■□□□□ 0.07
SNORD3D-201ENST00000619178 NKTRP30414 1462 aaKnown RBP15.46■□□□□ 0.06
SNORD3D-201ENST00000619178 PTCH1Q13635 1447 aa15.45■□□□□ 0.06
SNORD3D-201ENST00000619178 SENP3Q9H4L4 574 aaPredicted RBP15.45■□□□□ 0.06
SNORD3D-201ENST00000619178 METP08581 1390 aa15.45■□□□□ 0.06
SNORD3D-201ENST00000619178 CENPJQ9HC77 1338 aaPredicted RBP15.44■□□□□ 0.06
SNORD3D-201ENST00000619178 POGKQ9P215 609 aa15.44■□□□□ 0.06
SNORD3D-201ENST00000619178 TRAK1Q9UPV9 953 aa15.44■□□□□ 0.06
SNORD3D-201ENST00000619178 SBNO2Q9Y2G9 1366 aa15.44■□□□□ 0.06
SNORD3D-201ENST00000619178 ITSN1Q15811 1721 aa15.43■□□□□ 0.06
SNORD3D-201ENST00000619178 HSPA5P11021 654 aaKnown RBP15.43■□□□□ 0.06
SNORD3D-201ENST00000619178 CDCA8Q53HL2 280 aa15.43■□□□□ 0.06
SNORD3D-201ENST00000619178 STK26Q9P289 416 aa15.43■□□□□ 0.06
SNORD3D-201ENST00000619178 STRCP1A6NGW2 1772 aa15.42■□□□□ 0.06
SNORD3D-201ENST00000619178 KCNA6P17658 529 aa15.42■□□□□ 0.06
SNORD3D-201ENST00000619178 AMOTL2Q9Y2J4 779 aa15.42■□□□□ 0.06
SNORD3D-201ENST00000619178 ADGRB2O60241 1585 aa15.41■□□□□ 0.06
SNORD3D-201ENST00000619178 ST20-MTHFSA0A0A6YYL1 179 aa15.4■□□□□ 0.06
SNORD3D-201ENST00000619178 ZNF316A6NFI3 1004 aaPredicted RBP15.4■□□□□ 0.06
SNORD3D-201ENST00000619178 TMF1P82094 1093 aa15.4■□□□□ 0.06
SNORD3D-201ENST00000619178 NALCNQ8IZF0 1738 aa15.4■□□□□ 0.06
SNORD3D-201ENST00000619178 PTPRUQ92729 1446 aa15.38■□□□□ 0.05
SNORD3D-201ENST00000619178 PRAM1Q96QH2 718 aa15.38■□□□□ 0.05
SNORD3D-201ENST00000619178 XIRP1Q702N8 1843 aaKnown RBP15.38■□□□□ 0.05
SNORD3D-201ENST00000619178 NCOA3Q9Y6Q9 1424 aa15.37■□□□□ 0.05
SNORD3D-201ENST00000619178 EVC2Q86UK5 1308 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms