RNA–Protein interactions for RNA: ENST00000619146.1

SYN3-213, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-213ENST00000619146 TRIM52Q96A61 297 aa14.1□□□□□ -0.15
SYN3-213ENST00000619146 MSH6P52701 1360 aa14.09□□□□□ -0.15
SYN3-213ENST00000619146 KANK1Q14678 1352 aa14.09□□□□□ -0.15
SYN3-213ENST00000619146 LRP6O75581 1613 aa14.09□□□□□ -0.15
SYN3-213ENST00000619146 PPARGC1BQ86YN6 1023 aaKnown RBP14.08□□□□□ -0.16
SYN3-213ENST00000619146 SHPRHQ149N8 1683 aa14.07□□□□□ -0.16
SYN3-213ENST00000619146 DAPK1P53355 1430 aa14.07□□□□□ -0.16
SYN3-213ENST00000619146 NKTRP30414 1462 aaKnown RBP14.07□□□□□ -0.16
SYN3-213ENST00000619146 SLAIN2Q9P270 581 aa14.07□□□□□ -0.16
SYN3-213ENST00000619146 MEX3CQ5U5Q3 659 aaKnown RBP14.06□□□□□ -0.16
SYN3-213ENST00000619146 NUTM2DQ5VT03 806 aaPredicted RBP14.06□□□□□ -0.16
SYN3-213ENST00000619146 JCADQ9P266 1359 aa14.06□□□□□ -0.16
SYN3-213ENST00000619146 C14orf37Q86TY3 774 aa14.05□□□□□ -0.16
SYN3-213ENST00000619146 TMEM131LA2VDJ0 1609 aa14.04□□□□□ -0.16
SYN3-213ENST00000619146 LMTK2Q8IWU2 1503 aa14.04□□□□□ -0.16
SYN3-213ENST00000619146 PPP1R15AO75807 674 aaPredicted RBP14.03□□□□□ -0.16
SYN3-213ENST00000619146 CHGAP10645 457 aaKnown RBP14.03□□□□□ -0.16
SYN3-213ENST00000619146 NOS1P29475 1434 aa14.03□□□□□ -0.16
SYN3-213ENST00000619146 E9PCH4 1651 aa14.02□□□□□ -0.16
SYN3-213ENST00000619146 NUTM2BA6NNL0 878 aaPredicted RBP14.02□□□□□ -0.17
SYN3-213ENST00000619146 NUTM2EB1AL46 878 aaPredicted RBP14.02□□□□□ -0.17
SYN3-213ENST00000619146 NUTM2AQ8IVF1 878 aaPredicted RBP14.02□□□□□ -0.17
SYN3-213ENST00000619146 UPF1Q92900 1129 aaKnown RBP eCLIP14.02□□□□□ -0.17
SYN3-213ENST00000619146 RIMS2Q9UQ26 1411 aa14.01□□□□□ -0.17
SYN3-213ENST00000619146 ANKRD30AQ9BXX3 1397 aa14□□□□□ -0.17
SYN3-213ENST00000619146 AHDC1Q5TGY3 1603 aaPredicted RBP14□□□□□ -0.17
SYN3-213ENST00000619146 ZFYVE9O95405 1425 aa13.99□□□□□ -0.17
SYN3-213ENST00000619146 FGD6Q6ZV73 1430 aa13.99□□□□□ -0.17
SYN3-213ENST00000619146 TRIM26Q12899 539 aaPredicted RBP13.98□□□□□ -0.17
SYN3-213ENST00000619146 PLEKHG1Q9ULL1 1385 aa13.97□□□□□ -0.17
SYN3-213ENST00000619146 DIP2AQ14689 1571 aa13.97□□□□□ -0.17
SYN3-213ENST00000619146 ZNF772Q68DY9 489 aaPredicted RBP13.96□□□□□ -0.17
SYN3-213ENST00000619146 NHSL1Q5SYE7 1610 aa13.96□□□□□ -0.17
SYN3-213ENST00000619146 SPATA31A6Q5VVP1 1343 aa13.95□□□□□ -0.18
SYN3-213ENST00000619146 SLC52A1Q9NWF4 448 aa13.95□□□□□ -0.18
SYN3-213ENST00000619146 ATF3P18847 181 aa13.94□□□□□ -0.18
SYN3-213ENST00000619146 RXRBP28702 533 aa13.94□□□□□ -0.18
SYN3-213ENST00000619146 FAM50AQ14320 339 aaKnown RBP13.94□□□□□ -0.18
SYN3-213ENST00000619146 UNC13BO14795 1591 aa13.93□□□□□ -0.18
SYN3-213ENST00000619146 ADAMTS13Q76LX8 1427 aa13.93□□□□□ -0.18
SYN3-213ENST00000619146 SRCAPQ6ZRS2 3230 aa13.93□□□□□ -0.18
SYN3-213ENST00000619146 NALCNQ8IZF0 1738 aa13.93□□□□□ -0.18
SYN3-213ENST00000619146 AFF2P51816 1311 aa13.92□□□□□ -0.18
SYN3-213ENST00000619146 DDX17Q92841 729 aaKnown RBP13.92□□□□□ -0.18
SYN3-213ENST00000619146 NRXN3Q9Y4C0 1643 aa13.92□□□□□ -0.18
SYN3-213ENST00000619146 RPRD2Q5VT52 1461 aaKnown RBP13.92□□□□□ -0.18
SYN3-213ENST00000619146 PTPRUQ92729 1446 aa13.91□□□□□ -0.18
SYN3-213ENST00000619146 RRBP1Q9P2E9 1410 aaKnown RBP13.91□□□□□ -0.18
SYN3-213ENST00000619146 TRPM2O94759 1503 aa13.91□□□□□ -0.18
SYN3-213ENST00000619146 XRN1Q8IZH2 1706 aaKnown RBP13.91□□□□□ -0.18
SYN3-213ENST00000619146 BRINP3Q76B58 766 aa13.91□□□□□ -0.18
SYN3-213ENST00000619146 ADGRL2O95490 1459 aa13.91□□□□□ -0.18
SYN3-213ENST00000619146 ANKRD50Q9ULJ7 1429 aa13.9□□□□□ -0.18
SYN3-213ENST00000619146 ASXL1Q8IXJ9 1541 aa13.9□□□□□ -0.18
SYN3-213ENST00000619146 SPHKAPQ2M3C7 1700 aa13.9□□□□□ -0.18
SYN3-213ENST00000619146 CADPS2Q86UW7 1296 aa13.9□□□□□ -0.18
SYN3-213ENST00000619146 TBX22Q9Y458 520 aa13.9□□□□□ -0.18
SYN3-213ENST00000619146 HDGFP51858 240 aaKnown RBP13.89□□□□□ -0.19
SYN3-213ENST00000619146 C8orf37Q96NL8 207 aa13.89□□□□□ -0.19
SYN3-213ENST00000619146 C19orf44Q9H6X5 657 aa13.89□□□□□ -0.19
SYN3-213ENST00000619146 AMOTL2Q9Y2J4 779 aa13.89□□□□□ -0.19
SYN3-213ENST00000619146 IQGAP3Q86VI3 1631 aa13.89□□□□□ -0.19
SYN3-213ENST00000619146 RGS12O14924 1447 aa13.88□□□□□ -0.19
SYN3-213ENST00000619146 KIF1BO60333 1816 aa13.86□□□□□ -0.19
SYN3-213ENST00000619146 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.86□□□□□ -0.19
SYN3-213ENST00000619146 NCOA3Q9Y6Q9 1424 aa13.86□□□□□ -0.19
SYN3-213ENST00000619146 EP400Q96L91 3159 aa13.85□□□□□ -0.19
SYN3-213ENST00000619146 MARF1Q9Y4F3 1742 aaKnown RBP13.85□□□□□ -0.19
SYN3-213ENST00000619146 ADAMTS2O95450 1211 aa13.85□□□□□ -0.19
SYN3-213ENST00000619146 MST1RQ04912 1400 aa13.84□□□□□ -0.19
SYN3-213ENST00000619146 QTRT2Q9H974 415 aaKnown RBP13.84□□□□□ -0.19
SYN3-213ENST00000619146 CDK12Q9NYV4 1490 aaPredicted RBP13.84□□□□□ -0.19
SYN3-213ENST00000619146 PCGF6Q9BYE7 350 aa13.83□□□□□ -0.2
SYN3-213ENST00000619146 PIK3R4Q99570 1358 aa13.82□□□□□ -0.2
SYN3-213ENST00000619146 SETD5Q9C0A6 1442 aa13.81□□□□□ -0.2
SYN3-213ENST00000619146 BRWD3Q6RI45 1802 aa13.81□□□□□ -0.2
SYN3-213ENST00000619146 ITGAEP38570 1179 aa13.81□□□□□ -0.2
SYN3-213ENST00000619146 ZNF326Q5BKZ1 582 aaKnown RBP13.81□□□□□ -0.2
SYN3-213ENST00000619146 PNPLA6Q8IY17 1366 aa13.81□□□□□ -0.2
SYN3-213ENST00000619146 SETBP1Q9Y6X0 1596 aa13.8□□□□□ -0.2
SYN3-213ENST00000619146 RBM6P78332 1123 aaKnown RBP13.8□□□□□ -0.2
SYN3-213ENST00000619146 NGLY1Q96IV0 654 aa13.8□□□□□ -0.2
SYN3-213ENST00000619146 METP08581 1390 aa13.8□□□□□ -0.2
SYN3-213ENST00000619146 CLTCL1P53675 1640 aa13.79□□□□□ -0.2
SYN3-213ENST00000619146 LRRC59Q96AG4 307 aaKnown RBP13.79□□□□□ -0.2
SYN3-213ENST00000619146 DCCP43146 1447 aa13.79□□□□□ -0.2
SYN3-213ENST00000619146 NUP155O75694 1391 aa13.77□□□□□ -0.21
SYN3-213ENST00000619146 ADGRL3Q9HAR2 1447 aa13.76□□□□□ -0.21
SYN3-213ENST00000619146 RGPD8O14715 1765 aaPredicted RBP13.76□□□□□ -0.21
SYN3-213ENST00000619146 NEXMIFQ5QGS0 1516 aa13.75□□□□□ -0.21
SYN3-213ENST00000619146 USP21Q9UK80 565 aa13.75□□□□□ -0.21
SYN3-213ENST00000619146 LAMC1P11047 1609 aa13.75□□□□□ -0.21
SYN3-213ENST00000619146 ORAI2Q96SN7 254 aa13.74□□□□□ -0.21
SYN3-213ENST00000619146 ATAD2Q6PL18 1390 aa13.73□□□□□ -0.21
SYN3-213ENST00000619146 C1orf167Q5SNV9 1468 aa13.73□□□□□ -0.21
SYN3-213ENST00000619146 COL22A1Q8NFW1 1626 aaPredicted RBP13.72□□□□□ -0.21
SYN3-213ENST00000619146 PPLO60437 1756 aa13.72□□□□□ -0.21
SYN3-213ENST00000619146 XPCQ01831 940 aaPredicted RBP13.7□□□□□ -0.22
SYN3-213ENST00000619146 ZRANB1Q9UGI0 708 aa13.7□□□□□ -0.22
SYN3-213ENST00000619146 TRPC5Q9UL62 973 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms