RNA–Protein interactions for RNA: ENST00000619138.4

CNTNAP3B-215, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 3,840 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-215ENST00000619138 RTEL1-TNFRSF6BF6WH68 1400 aa17.81■□□□□ 0.44
CNTNAP3B-215ENST00000619138 MS4A1P11836 297 aa17.8■□□□□ 0.44
CNTNAP3B-215ENST00000619138 ARID3AQ99856 593 aa17.79■□□□□ 0.44
CNTNAP3B-215ENST00000619138 POGKQ9P215 609 aa17.79■□□□□ 0.44
CNTNAP3B-215ENST00000619138 POGZQ7Z3K3 1410 aa17.79■□□□□ 0.44
CNTNAP3B-215ENST00000619138 ZFYVE16Q7Z3T8 1539 aa17.79■□□□□ 0.44
CNTNAP3B-215ENST00000619138 ARAP3Q8WWN8 1544 aa17.79■□□□□ 0.44
CNTNAP3B-215ENST00000619138 MYBBP1AQ9BQG0 1328 aaKnown RBP17.79■□□□□ 0.44
CNTNAP3B-215ENST00000619138 STAG3Q9UJ98 1225 aa17.78■□□□□ 0.44
CNTNAP3B-215ENST00000619138 A2MP01023 1474 aa17.78■□□□□ 0.44
CNTNAP3B-215ENST00000619138 GLIPR1L2Q4G1C9 344 aa17.78■□□□□ 0.44
CNTNAP3B-215ENST00000619138 VSIG10Q8N0Z9 540 aa17.77■□□□□ 0.44
CNTNAP3B-215ENST00000619138 MAST1Q9Y2H9 1570 aa17.77■□□□□ 0.43
CNTNAP3B-215ENST00000619138 ROCK2O75116 1388 aaKnown RBP17.76■□□□□ 0.43
CNTNAP3B-215ENST00000619138 RNF123Q5XPI4 1314 aa17.76■□□□□ 0.43
CNTNAP3B-215ENST00000619138 NBPF1Q3BBV0 1214 aa17.76■□□□□ 0.43
CNTNAP3B-215ENST00000619138 WDR43Q15061 677 aaKnown RBP eCLIP17.76■□□□□ 0.43
CNTNAP3B-215ENST00000619138 CCDC146Q8IYE0 955 aa17.76■□□□□ 0.43
CNTNAP3B-215ENST00000619138 NLRP13Q86W25 1043 aa17.75■□□□□ 0.43
CNTNAP3B-215ENST00000619138 CFAP65Q6ZU64 1925 aaKnown RBP17.75■□□□□ 0.43
CNTNAP3B-215ENST00000619138 FAM161AQ3B820 660 aa17.74■□□□□ 0.43
CNTNAP3B-215ENST00000619138 YEATS2Q9ULM3 1422 aa17.74■□□□□ 0.43
CNTNAP3B-215ENST00000619138 NEUROD2Q15784 382 aa17.74■□□□□ 0.43
CNTNAP3B-215ENST00000619138 PLXNC1O60486 1568 aa17.74■□□□□ 0.43
CNTNAP3B-215ENST00000619138 NEO1Q92859 1461 aa17.73■□□□□ 0.43
CNTNAP3B-215ENST00000619138 TEX14Q8IWB6 1497 aa17.72■□□□□ 0.43
CNTNAP3B-215ENST00000619138 RALBP1Q15311 655 aa17.72■□□□□ 0.43
CNTNAP3B-215ENST00000619138 RSPH6AQ9H0K4 717 aa17.7■□□□□ 0.42
CNTNAP3B-215ENST00000619138 KTN1Q86UP2 1357 aaKnown RBP17.7■□□□□ 0.42
CNTNAP3B-215ENST00000619138 PLA2R1Q13018 1463 aa17.67■□□□□ 0.42
CNTNAP3B-215ENST00000619138 PANK3Q9H999 370 aa17.67■□□□□ 0.42
CNTNAP3B-215ENST00000619138 CFAP74Q9C0B2 1584 aa17.67■□□□□ 0.42
CNTNAP3B-215ENST00000619138 FBXO31Q5XUX0 539 aaPredicted RBP17.67■□□□□ 0.42
CNTNAP3B-215ENST00000619138 ADAMTS8Q9UP79 889 aa17.67■□□□□ 0.42
CNTNAP3B-215ENST00000619138 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.66■□□□□ 0.42
CNTNAP3B-215ENST00000619138 KDM5DQ9BY66 1539 aa17.66■□□□□ 0.42
CNTNAP3B-215ENST00000619138 KIDINS220Q9ULH0 1771 aa17.65■□□□□ 0.42
CNTNAP3B-215ENST00000619138 PKNOX2Q96KN3 472 aa17.65■□□□□ 0.42
CNTNAP3B-215ENST00000619138 INO80Q9ULG1 1556 aaPredicted RBP17.65■□□□□ 0.42
CNTNAP3B-215ENST00000619138 CENPQQ7L2Z9 268 aaPredicted RBP17.65■□□□□ 0.42
CNTNAP3B-215ENST00000619138 PNNQ9H307 717 aaKnown RBP17.65■□□□□ 0.42
CNTNAP3B-215ENST00000619138 MLH3Q9UHC1 1453 aa17.65■□□□□ 0.42
CNTNAP3B-215ENST00000619138 ZBTB7CA1YPR0 619 aa17.64■□□□□ 0.41
CNTNAP3B-215ENST00000619138 PDE3BQ13370 1112 aa17.64■□□□□ 0.41
CNTNAP3B-215ENST00000619138 HECW2Q9P2P5 1572 aa17.64■□□□□ 0.41
CNTNAP3B-215ENST00000619138 UNC13BO14795 1591 aa17.64■□□□□ 0.41
CNTNAP3B-215ENST00000619138 BECN1Q14457 450 aa17.64■□□□□ 0.41
CNTNAP3B-215ENST00000619138 DIP2BQ9P265 1576 aa17.63■□□□□ 0.41
CNTNAP3B-215ENST00000619138 RRAGDQ9NQL2 400 aaPredicted RBP17.63■□□□□ 0.41
CNTNAP3B-215ENST00000619138 CFAP70Q5T0N1 1121 aa17.62■□□□□ 0.41
CNTNAP3B-215ENST00000619138 FAM43AQ8N2R8 423 aa17.62■□□□□ 0.41
CNTNAP3B-215ENST00000619138 BCAR3O75815 825 aa17.62■□□□□ 0.41
CNTNAP3B-215ENST00000619138 UPF2Q9HAU5 1272 aaKnown RBP17.62■□□□□ 0.41
CNTNAP3B-215ENST00000619138 C8orf34Q49A92 452 aa17.61■□□□□ 0.41
CNTNAP3B-215ENST00000619138 BRD4O60885 1362 aaPredicted RBP17.61■□□□□ 0.41
CNTNAP3B-215ENST00000619138 IQGAP3Q86VI3 1631 aa17.61■□□□□ 0.41
CNTNAP3B-215ENST00000619138 TNNT2P45379 298 aaPredicted RBP17.61■□□□□ 0.41
CNTNAP3B-215ENST00000619138 CLUAP1Q96AJ1 413 aa17.61■□□□□ 0.41
CNTNAP3B-215ENST00000619138 BCL2L13Q9BXK5 485 aa17.61■□□□□ 0.41
CNTNAP3B-215ENST00000619138 COG6Q9Y2V7 657 aa17.6■□□□□ 0.41
CNTNAP3B-215ENST00000619138 UGGT1Q9NYU2 1555 aa17.6■□□□□ 0.41
CNTNAP3B-215ENST00000619138 SEC24BO95487 1268 aa17.59■□□□□ 0.41
CNTNAP3B-215ENST00000619138 ATP10AO60312 1499 aa17.59■□□□□ 0.41
CNTNAP3B-215ENST00000619138 SAFB2Q14151 953 aaKnown RBP eCLIP17.58■□□□□ 0.41
CNTNAP3B-215ENST00000619138 PANK2Q9BZ23 570 aa17.58■□□□□ 0.4
CNTNAP3B-215ENST00000619138 ADGRF5Q8IZF2 1346 aa17.58■□□□□ 0.4
CNTNAP3B-215ENST00000619138 IDI1Q13907 227 aa17.58■□□□□ 0.4
CNTNAP3B-215ENST00000619138 GOLGA2Q08379 1002 aa17.57■□□□□ 0.4
CNTNAP3B-215ENST00000619138 TMEM132EQ6IEE7 984 aa17.57■□□□□ 0.4
CNTNAP3B-215ENST00000619138 STK26Q9P289 416 aa17.57■□□□□ 0.4
CNTNAP3B-215ENST00000619138 KNSTRNQ9Y448 316 aa17.57■□□□□ 0.4
CNTNAP3B-215ENST00000619138 MAP3K4Q9Y6R4 1608 aa17.57■□□□□ 0.4
CNTNAP3B-215ENST00000619138 HSP90AA2PQ14568 343 aaPredicted RBP17.57■□□□□ 0.4
CNTNAP3B-215ENST00000619138 PANK1Q8TE04 598 aa17.57■□□□□ 0.4
CNTNAP3B-215ENST00000619138 ABCA6Q8N139 1617 aa17.56■□□□□ 0.4
CNTNAP3B-215ENST00000619138 SPATA31E1Q6ZUB1 1445 aa17.56■□□□□ 0.4
CNTNAP3B-215ENST00000619138 HSP90AA1P07900 732 aaKnown RBP17.56■□□□□ 0.4
CNTNAP3B-215ENST00000619138 AMER1Q5JTC6 1135 aaPredicted RBP17.56■□□□□ 0.4
CNTNAP3B-215ENST00000619138 TRAK1Q9UPV9 953 aa17.56■□□□□ 0.4
CNTNAP3B-215ENST00000619138 GOLGA6L3A6NEY3 463 aa17.56■□□□□ 0.4
CNTNAP3B-215ENST00000619138 APAF1O14727 1248 aa17.55■□□□□ 0.4
CNTNAP3B-215ENST00000619138 NPATQ14207 1427 aa17.55■□□□□ 0.4
CNTNAP3B-215ENST00000619138 KDM5CP41229 1560 aa17.55■□□□□ 0.4
CNTNAP3B-215ENST00000619138 COL17A1Q9UMD9 1497 aaPredicted RBP17.54■□□□□ 0.4
CNTNAP3B-215ENST00000619138 FOXD4L1Q9NU39 408 aa17.54■□□□□ 0.4
CNTNAP3B-215ENST00000619138 GLI2P10070 1586 aa17.54■□□□□ 0.4
CNTNAP3B-215ENST00000619138 E9PCH4 1651 aa17.54■□□□□ 0.4
CNTNAP3B-215ENST00000619138 PRAG1Q86YV5 1406 aa17.54■□□□□ 0.4
CNTNAP3B-215ENST00000619138 PLEKHG5O94827 1062 aa17.54■□□□□ 0.4
CNTNAP3B-215ENST00000619138 L1TD1Q5T7N2 865 aaKnown RBP17.54■□□□□ 0.4
CNTNAP3B-215ENST00000619138 RRP7AQ9Y3A4 280 aaKnown RBP17.54■□□□□ 0.4
CNTNAP3B-215ENST00000619138 MAGI2Q86UL8 1455 aa17.53■□□□□ 0.4
CNTNAP3B-215ENST00000619138 CEBPAP49715 358 aaPredicted RBP17.52■□□□□ 0.4
CNTNAP3B-215ENST00000619138 IGHDP01880 384 aa17.52■□□□□ 0.39
CNTNAP3B-215ENST00000619138 MFAP1P55081 439 aaKnown RBP17.52■□□□□ 0.39
CNTNAP3B-215ENST00000619138 TMF1P82094 1093 aa17.52■□□□□ 0.39
CNTNAP3B-215ENST00000619138 DIP2CQ9Y2E4 1556 aa17.52■□□□□ 0.39
CNTNAP3B-215ENST00000619138 PRDM15P57071 1507 aaPredicted RBP17.51■□□□□ 0.39
CNTNAP3B-215ENST00000619138 CEP152O94986 1710 aa17.51■□□□□ 0.39
CNTNAP3B-215ENST00000619138 TRIM44Q96DX7 344 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms