RNA–Protein interactions for RNA: ENST00000618511.4

RDM1-222, Transcript of RAD52 motif containing 1, humanhuman

TSL 1 (best)

Gene RDM1, Length 518 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-222ENST00000618511 KANK1Q14678 1352 aa9.09□□□□□ -0.95
RDM1-222ENST00000618511 SPDYE1Q8NFV5 336 aaPredicted RBP9.08□□□□□ -0.96
RDM1-222ENST00000618511 RRP7BPQ9NSQ0 103 aa9.08□□□□□ -0.96
RDM1-222ENST00000618511 SLIT1O75093 1534 aa9.08□□□□□ -0.96
RDM1-222ENST00000618511 UGGT1Q9NYU2 1555 aa9.07□□□□□ -0.96
RDM1-222ENST00000618511 EFCAB6Q5THR3 1501 aa9.07□□□□□ -0.96
RDM1-222ENST00000618511 NEURL4Q96JN8 1562 aa9.07□□□□□ -0.96
RDM1-222ENST00000618511 ANKLE2Q86XL3 938 aa9.05□□□□□ -0.96
RDM1-222ENST00000618511 KDM5AP29375 1690 aaKnown RBP9.04□□□□□ -0.96
RDM1-222ENST00000618511 SLC52A1Q9NWF4 448 aa9.04□□□□□ -0.96
RDM1-222ENST00000618511 CPS1P31327 1500 aa9.04□□□□□ -0.96
RDM1-222ENST00000618511 NPHP4O75161 1426 aaPredicted RBP9.04□□□□□ -0.96
RDM1-222ENST00000618511 UNC13BO14795 1591 aa9.03□□□□□ -0.96
RDM1-222ENST00000618511 NCKAP5LQ9HCH0 1330 aa9.03□□□□□ -0.96
RDM1-222ENST00000618511 SCAF11Q99590 1463 aaKnown RBP9.02□□□□□ -0.96
RDM1-222ENST00000618511 TMEM2Q9UHN6 1383 aa9.02□□□□□ -0.97
RDM1-222ENST00000618511 HAX1O00165 279 aa9.02□□□□□ -0.97
RDM1-222ENST00000618511 FAM50AQ14320 339 aaKnown RBP9.02□□□□□ -0.97
RDM1-222ENST00000618511 HFM1A2PYH4 1435 aa9.01□□□□□ -0.97
RDM1-222ENST00000618511 SP7Q8TDD2 431 aaPredicted RBP9.01□□□□□ -0.97
RDM1-222ENST00000618511 CHIC2Q9UKJ5 165 aa9.01□□□□□ -0.97
RDM1-222ENST00000618511 ZNF335Q9H4Z2 1342 aaPredicted RBP9.01□□□□□ -0.97
RDM1-222ENST00000618511 SYNMO15061 1565 aa9□□□□□ -0.97
RDM1-222ENST00000618511 ZFYVE9O95405 1425 aa8.99□□□□□ -0.97
RDM1-222ENST00000618511 PRKAR2AP13861 404 aaKnown RBP8.99□□□□□ -0.97
RDM1-222ENST00000618511 IDI1Q13907 227 aa8.99□□□□□ -0.97
RDM1-222ENST00000618511 TET3O43151 1660 aa8.99□□□□□ -0.97
RDM1-222ENST00000618511 ADGRB3O60242 1522 aa8.99□□□□□ -0.97
RDM1-222ENST00000618511 IQGAP3Q86VI3 1631 aa8.98□□□□□ -0.97
RDM1-222ENST00000618511 NAIPQ13075 1403 aa8.98□□□□□ -0.97
RDM1-222ENST00000618511 ACIN1Q9UKV3 1341 aaKnown RBP8.98□□□□□ -0.97
RDM1-222ENST00000618511 UBR1Q8IWV7 1749 aa8.97□□□□□ -0.97
RDM1-222ENST00000618511 PIK3C2BO00750 1634 aa8.97□□□□□ -0.97
RDM1-222ENST00000618511 CEP152O94986 1710 aa8.97□□□□□ -0.97
RDM1-222ENST00000618511 POLR1AO95602 1720 aaPredicted RBP8.97□□□□□ -0.97
RDM1-222ENST00000618511 LTKP29376 864 aa8.96□□□□□ -0.98
RDM1-222ENST00000618511 EID1Q9Y6B2 187 aa8.96□□□□□ -0.98
RDM1-222ENST00000618511 NUP155O75694 1391 aa8.96□□□□□ -0.98
RDM1-222ENST00000618511 PLEKHG1Q9ULL1 1385 aa8.96□□□□□ -0.98
RDM1-222ENST00000618511 PIK3R4Q99570 1358 aa8.95□□□□□ -0.98
RDM1-222ENST00000618511 IQGAP1P46940 1657 aa8.94□□□□□ -0.98
RDM1-222ENST00000618511 TXNDC2Q86VQ3 553 aa8.94□□□□□ -0.98
RDM1-222ENST00000618511 NCOA3Q9Y6Q9 1424 aa8.94□□□□□ -0.98
RDM1-222ENST00000618511 NKTRP30414 1462 aaKnown RBP8.94□□□□□ -0.98
RDM1-222ENST00000618511 LRRC7Q96NW7 1537 aa8.94□□□□□ -0.98
RDM1-222ENST00000618511 PRR29P0C7W0 189 aa8.93□□□□□ -0.98
RDM1-222ENST00000618511 HDGFP51858 240 aaKnown RBP8.93□□□□□ -0.98
RDM1-222ENST00000618511 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.93□□□□□ -0.98
RDM1-222ENST00000618511 GCC2Q8IWJ2 1684 aa8.93□□□□□ -0.98
RDM1-222ENST00000618511 NWD1Q149M9 1564 aa8.92□□□□□ -0.98
RDM1-222ENST00000618511 PRAG1Q86YV5 1406 aa8.92□□□□□ -0.98
RDM1-222ENST00000618511 EVX2Q03828 476 aa8.92□□□□□ -0.98
RDM1-222ENST00000618511 TMEM131LA2VDJ0 1609 aa8.91□□□□□ -0.98
RDM1-222ENST00000618511 TRPM2O94759 1503 aa8.91□□□□□ -0.98
RDM1-222ENST00000618511 KCNA6P17658 529 aa8.91□□□□□ -0.98
RDM1-222ENST00000618511 CHADLQ6NUI6 762 aa8.91□□□□□ -0.98
RDM1-222ENST00000618511 TBX22Q9Y458 520 aa8.91□□□□□ -0.98
RDM1-222ENST00000618511 ALKQ9UM73 1620 aa8.91□□□□□ -0.98
RDM1-222ENST00000618511 DIP2AQ14689 1571 aa8.9□□□□□ -0.98
RDM1-222ENST00000618511 RIMS2Q9UQ26 1411 aa8.9□□□□□ -0.98
RDM1-222ENST00000618511 TOM1O60784 492 aa8.9□□□□□ -0.98
RDM1-222ENST00000618511 ADAMTS13Q76LX8 1427 aa8.89□□□□□ -0.99
RDM1-222ENST00000618511 E9PCH4 1651 aa8.89□□□□□ -0.99
RDM1-222ENST00000618511 STAG3Q9UJ98 1225 aa8.89□□□□□ -0.99
RDM1-222ENST00000618511 UBAP1LF5GYI3 381 aa8.88□□□□□ -0.99
RDM1-222ENST00000618511 FAM135BQ49AJ0 1406 aa8.88□□□□□ -0.99
RDM1-222ENST00000618511 SETBP1Q9Y6X0 1596 aa8.87□□□□□ -0.99
RDM1-222ENST00000618511 HRCP23327 699 aa8.86□□□□□ -0.99
RDM1-222ENST00000618511 DCCP43146 1447 aa8.86□□□□□ -0.99
RDM1-222ENST00000618511 TMEM94Q12767 1356 aa8.86□□□□□ -0.99
RDM1-222ENST00000618511 RPGRIP1LQ68CZ1 1315 aa8.85□□□□□ -0.99
RDM1-222ENST00000618511 C19orf67A6NJJ6 358 aa8.84□□□□□ -0.99
RDM1-222ENST00000618511 SPDYE4A6NLX3 237 aa8.84□□□□□ -0.99
RDM1-222ENST00000618511 ITGAEP38570 1179 aa8.84□□□□□ -0.99
RDM1-222ENST00000618511 PPARGC1BQ86YN6 1023 aaKnown RBP8.83□□□□□ -1
RDM1-222ENST00000618511 SLC26A8Q96RN1 970 aa8.83□□□□□ -1
RDM1-222ENST00000618511 NEXMIFQ5QGS0 1516 aa8.83□□□□□ -1
RDM1-222ENST00000618511 STRCP1A6NGW2 1772 aa8.83□□□□□ -1
RDM1-222ENST00000618511 PTCH1Q13635 1447 aa8.82□□□□□ -1
RDM1-222ENST00000618511 SPATA31E1Q6ZUB1 1445 aa8.82□□□□□ -1
RDM1-222ENST00000618511 SPHKAPQ2M3C7 1700 aa8.82□□□□□ -1
RDM1-222ENST00000618511 CLTCL1P53675 1640 aa8.81□□□□□ -1
RDM1-222ENST00000618511 PPP1R15AO75807 674 aaPredicted RBP8.81□□□□□ -1
RDM1-222ENST00000618511 PTPRUQ92729 1446 aa8.8□□□□□ -1
RDM1-222ENST00000618511 SETD5Q9C0A6 1442 aa8.8□□□□□ -1
RDM1-222ENST00000618511 NRXN3Q9Y4C0 1643 aa8.8□□□□□ -1
RDM1-222ENST00000618511 VGFO15240 615 aaPredicted RBP8.8□□□□□ -1
RDM1-222ENST00000618511 MSH6P52701 1360 aa8.8□□□□□ -1
RDM1-222ENST00000618511 ANKRD30BQ9BXX2 1392 aa8.8□□□□□ -1
RDM1-222ENST00000618511 HSPA1LP34931 641 aa8.79□□□□□ -1
RDM1-222ENST00000618511 MPHOSPH9Q99550 1183 aa8.79□□□□□ -1
RDM1-222ENST00000618511 XRN1Q8IZH2 1706 aaKnown RBP8.79□□□□□ -1
RDM1-222ENST00000618511 CCDC144AA2RUR9 1427 aa8.79□□□□□ -1
RDM1-222ENST00000618511 TECPR2O15040 1411 aa8.79□□□□□ -1
RDM1-222ENST00000618511 NRXN1Q9ULB1 1477 aa8.78□□□□□ -1
RDM1-222ENST00000618511 METP08581 1390 aa8.78□□□□□ -1
RDM1-222ENST00000618511 PROSER2Q86WR7 435 aaPredicted RBP8.78□□□□□ -1
RDM1-222ENST00000618511 C19orf44Q9H6X5 657 aa8.78□□□□□ -1
RDM1-222ENST00000618511 CADPS2Q86UW7 1296 aa8.77□□□□□ -1.01
RDM1-222ENST00000618511 STAC3Q96MF2 364 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms