RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 DMTNQ08495 405 aa15.36■□□□□ 0.05
MATR3-227ENST00000618441 SLC4A1APQ9BWU0 796 aaKnown RBP15.36■□□□□ 0.05
MATR3-227ENST00000618441 CCDC18Q5T9S5 1454 aa15.36■□□□□ 0.05
MATR3-227ENST00000618441 PSMD1Q99460 953 aa15.36■□□□□ 0.05
MATR3-227ENST00000618441 PTMSP20962 102 aa15.36■□□□□ 0.05
MATR3-227ENST00000618441 PRDM2Q13029 1718 aa15.36■□□□□ 0.05
MATR3-227ENST00000618441 WDR43Q15061 677 aaKnown RBP eCLIP15.35■□□□□ 0.057e-6■■□□□ 14
MATR3-227ENST00000618441 GBP4Q96PP9 640 aa15.35■□□□□ 0.05
MATR3-227ENST00000618441 COG6Q9Y2V7 657 aa15.35■□□□□ 0.05
MATR3-227ENST00000618441 GOLGA6L22H0YM25 854 aa15.35■□□□□ 0.05
MATR3-227ENST00000618441 IGHDP01880 384 aa15.34■□□□□ 0.05
MATR3-227ENST00000618441 MTERF4Q7Z6M4 381 aaKnown RBP15.34■□□□□ 0.05
MATR3-227ENST00000618441 RNF214Q8ND24 703 aa15.33■□□□□ 0.05
MATR3-227ENST00000618441 MPHOSPH9Q99550 1183 aa15.33■□□□□ 0.05
MATR3-227ENST00000618441 ANTXR1Q9H6X2 564 aa15.33■□□□□ 0.05
MATR3-227ENST00000618441 CCDC94Q9BW85 323 aaPredicted RBP15.33■□□□□ 0.04
MATR3-227ENST00000618441 MYBBP1AQ9BQG0 1328 aaKnown RBP15.33■□□□□ 0.04
MATR3-227ENST00000618441 NCOA1Q15788 1441 aa15.32■□□□□ 0.04
MATR3-227ENST00000618441 KDM2BQ8NHM5 1336 aa15.32■□□□□ 0.04
MATR3-227ENST00000618441 HNRNPMP52272 730 aaKnown RBP eCLIP15.32■□□□□ 0.044e-9■■■■■ 28.9
MATR3-227ENST00000618441 CARD11Q9BXL7 1154 aa15.32■□□□□ 0.04
MATR3-227ENST00000618441 CASKIN1Q8WXD9 1431 aa15.31■□□□□ 0.04
MATR3-227ENST00000618441 KCNJ4P48050 445 aa15.31■□□□□ 0.04
MATR3-227ENST00000618441 ZBTB9Q96C00 473 aa15.31■□□□□ 0.04
MATR3-227ENST00000618441 BCAR3O75815 825 aa15.31■□□□□ 0.04
MATR3-227ENST00000618441 TMEM51Q9NW97 253 aa15.31■□□□□ 0.04
MATR3-227ENST00000618441 PLB1Q6P1J6 1458 aa15.31■□□□□ 0.04
MATR3-227ENST00000618441 USP19O94966 1318 aa15.31■□□□□ 0.04
MATR3-227ENST00000618441 TIAM1Q13009 1591 aa15.31■□□□□ 0.04
MATR3-227ENST00000618441 CLUAP1Q96AJ1 413 aa15.3■□□□□ 0.04
MATR3-227ENST00000618441 ZSCAN20P17040 1043 aaPredicted RBP15.3■□□□□ 0.04
MATR3-227ENST00000618441 PANK1Q8TE04 598 aa15.3■□□□□ 0.04
MATR3-227ENST00000618441 PANK3Q9H999 370 aa15.3■□□□□ 0.04
MATR3-227ENST00000618441 CAVIN1Q6NZI2 390 aaKnown RBP15.29■□□□□ 0.04
MATR3-227ENST00000618441 C22orf23Q9BZE7 217 aa15.29■□□□□ 0.04
MATR3-227ENST00000618441 DYNC1I1O14576 645 aa15.29■□□□□ 0.04
MATR3-227ENST00000618441 NLRP13Q86W25 1043 aa15.29■□□□□ 0.04
MATR3-227ENST00000618441 CCDC146Q8IYE0 955 aa15.29■□□□□ 0.04
MATR3-227ENST00000618441 TNPO1Q92973 898 aaKnown RBP15.29■□□□□ 0.04
MATR3-227ENST00000618441 PRG4Q92954 1404 aaPredicted RBP15.29■□□□□ 0.04
MATR3-227ENST00000618441 MAP3K1Q13233 1512 aa15.29■□□□□ 0.04
MATR3-227ENST00000618441 APPP05067 770 aa15.28■□□□□ 0.04
MATR3-227ENST00000618441 NEUROD2Q15784 382 aa15.28■□□□□ 0.04
MATR3-227ENST00000618441 FOXD4L5Q5VV16 416 aaPredicted RBP15.28■□□□□ 0.04
MATR3-227ENST00000618441 FOXD4L4Q8WXT5 416 aaPredicted RBP15.28■□□□□ 0.04
MATR3-227ENST00000618441 TARBP1Q13395 1621 aaKnown RBP15.28■□□□□ 0.04
MATR3-227ENST00000618441 PLCD4Q9BRC7 762 aa15.27■□□□□ 0.04
MATR3-227ENST00000618441 GRIN2AQ12879 1464 aa15.27■□□□□ 0.04
MATR3-227ENST00000618441 NCOA2Q15596 1464 aa15.27■□□□□ 0.03
MATR3-227ENST00000618441 UACAQ9BZF9 1416 aa15.26■□□□□ 0.03
MATR3-227ENST00000618441 SASS6Q6UVJ0 657 aa15.26■□□□□ 0.03
MATR3-227ENST00000618441 BCL2L13Q9BXK5 485 aa15.26■□□□□ 0.03
MATR3-227ENST00000618441 CARMIL2Q6F5E8 1435 aa15.25■□□□□ 0.03
MATR3-227ENST00000618441 RALBP1Q15311 655 aa15.25■□□□□ 0.03
MATR3-227ENST00000618441 FGD6Q6ZV73 1430 aa15.25■□□□□ 0.03
MATR3-227ENST00000618441 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.25■□□□□ 0.03
MATR3-227ENST00000618441 CSPP1Q1MSJ5 1256 aa15.25■□□□□ 0.03
MATR3-227ENST00000618441 ERICH4A6NGS2 130 aa15.25■□□□□ 0.03
MATR3-227ENST00000618441 TSPY4P0CV99 314 aa15.25■□□□□ 0.03
MATR3-227ENST00000618441 TSPY10P0CW01 314 aa15.25■□□□□ 0.03
MATR3-227ENST00000618441 PTPRGP23470 1445 aa15.25■□□□□ 0.03
MATR3-227ENST00000618441 CUL7Q14999 1698 aa15.24■□□□□ 0.03
MATR3-227ENST00000618441 ABCA5Q8WWZ7 1642 aa15.24■□□□□ 0.03
MATR3-227ENST00000618441 ST20-MTHFSA0A0A6YYL1 179 aa15.24■□□□□ 0.03
MATR3-227ENST00000618441 TBC1D32Q96NH3 1257 aa15.24■□□□□ 0.03
MATR3-227ENST00000618441 MAPK8IP3Q9UPT6 1336 aa15.24■□□□□ 0.03
MATR3-227ENST00000618441 IQGAP2Q13576 1575 aa15.24■□□□□ 0.03
MATR3-227ENST00000618441 MCTP1Q6DN14 999 aa15.23■□□□□ 0.03
MATR3-227ENST00000618441 GOLGA2Q08379 1002 aa15.23■□□□□ 0.03
MATR3-227ENST00000618441 UTP14CQ5TAP6 766 aaKnown RBP15.23■□□□□ 0.03
MATR3-227ENST00000618441 FTSJ3Q8IY81 847 aaKnown RBP15.23■□□□□ 0.03
MATR3-227ENST00000618441 EIF4G3O43432 1585 aaKnown RBP15.22■□□□□ 0.03
MATR3-227ENST00000618441 FYCO1Q9BQS8 1478 aa15.22■□□□□ 0.03
MATR3-227ENST00000618441 USP47Q96K76 1375 aa15.22■□□□□ 0.03
MATR3-227ENST00000618441 LETM1O95202 739 aaPredicted RBP15.22■□□□□ 0.03
MATR3-227ENST00000618441 KIF15Q9NS87 1388 aa15.22■□□□□ 0.03
MATR3-227ENST00000618441 KIF20AO95235 890 aa15.22■□□□□ 0.03
MATR3-227ENST00000618441 SKOR2Q2VWA4 1001 aaPredicted RBP15.22■□□□□ 0.03
MATR3-227ENST00000618441 TNNT3P45378 269 aaPredicted RBP15.22■□□□□ 0.03
MATR3-227ENST00000618441 RGL3Q3MIN7 710 aa15.22■□□□□ 0.03
MATR3-227ENST00000618441 ISY1Q9ULR0 285 aaKnown RBP15.22■□□□□ 0.03
MATR3-227ENST00000618441 ATP2B3Q16720 1220 aa15.21■□□□□ 0.03
MATR3-227ENST00000618441 TICAM2Q86XR7 235 aa15.21■□□□□ 0.03
MATR3-227ENST00000618441 GTPBP4Q9BZE4 634 aaKnown RBP15.21■□□□□ 0.03
MATR3-227ENST00000618441 ADAMTS8Q9UP79 889 aa15.21■□□□□ 0.03
MATR3-227ENST00000618441 DHX29Q7Z478 1369 aaKnown RBP15.21■□□□□ 0.03
MATR3-227ENST00000618441 PDZRN3Q9UPQ7 1066 aa15.21■□□□□ 0.03
MATR3-227ENST00000618441 KIAA0586Q9BVV6 1533 aa15.2■□□□□ 0.02
MATR3-227ENST00000618441 U2AF2P26368 475 aaKnown RBP eCLIP15.2■□□□□ 0.024e-7■■■■□ 20.7
MATR3-227ENST00000618441 SSFA2P28290 1259 aa15.2■□□□□ 0.02
MATR3-227ENST00000618441 FOXD4L6Q3SYB3 417 aaPredicted RBP15.2■□□□□ 0.02
MATR3-227ENST00000618441 FOXD4L3Q6VB84 417 aaPredicted RBP15.2■□□□□ 0.02
MATR3-227ENST00000618441 C17orf53Q8N3J3 647 aaPredicted RBP15.2■□□□□ 0.02
MATR3-227ENST00000618441 PDCL2Q8N4E4 241 aa15.2■□□□□ 0.02
MATR3-227ENST00000618441 PTPRKQ15262 1439 aa15.19■□□□□ 0.02
MATR3-227ENST00000618441 KIAA2012Q0VF49 1180 aa15.19■□□□□ 0.02
MATR3-227ENST00000618441 WDR62O43379 1518 aa15.19■□□□□ 0.02
MATR3-227ENST00000618441 FAM193AP78312 1265 aa15.19■□□□□ 0.02
MATR3-227ENST00000618441 IRX3P78415 501 aaPredicted RBP15.18■□□□□ 0.02
MATR3-227ENST00000618441 EPRSP07814 1512 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms