RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 RPGRIP1LQ68CZ1 1315 aa32.93■■■□□ 2.86
CBWD3-213ENST00000618217 IFT172Q9UG01 1749 aa32.92■■■□□ 2.86
CBWD3-213ENST00000618217 PPLO60437 1756 aa32.92■■■□□ 2.86
CBWD3-213ENST00000618217 LTKP29376 864 aa32.91■■■□□ 2.86
CBWD3-213ENST00000618217 STRCQ7RTU9 1775 aa32.9■■■□□ 2.86
CBWD3-213ENST00000618217 TXNDC2Q86VQ3 553 aa32.88■■■□□ 2.85
CBWD3-213ENST00000618217 ANKLE2Q86XL3 938 aa32.88■■■□□ 2.85
CBWD3-213ENST00000618217 POLR1AO95602 1720 aaPredicted RBP32.87■■■□□ 2.85
CBWD3-213ENST00000618217 SCAF11Q99590 1463 aaKnown RBP32.87■■■□□ 2.85
CBWD3-213ENST00000618217 HDGFP51858 240 aaKnown RBP32.84■■■□□ 2.85
CBWD3-213ENST00000618217 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.84■■■□□ 2.85
CBWD3-213ENST00000618217 EID1Q9Y6B2 187 aa32.84■■■□□ 2.85
CBWD3-213ENST00000618217 NUTM2DQ5VT03 806 aaPredicted RBP32.84■■■□□ 2.85
CBWD3-213ENST00000618217 NCKAP5LQ9HCH0 1330 aa32.84■■■□□ 2.85
CBWD3-213ENST00000618217 L3MBTL2Q969R5 705 aa32.83■■■□□ 2.85
CBWD3-213ENST00000618217 MED14O60244 1454 aa32.81■■■□□ 2.84
CBWD3-213ENST00000618217 VGFO15240 615 aaPredicted RBP32.8■■■□□ 2.84
CBWD3-213ENST00000618217 DCAF11Q8TEB1 546 aa32.8■■■□□ 2.84
CBWD3-213ENST00000618217 MYOM2P54296 1465 aa32.78■■■□□ 2.84
CBWD3-213ENST00000618217 ADGRF5Q8IZF2 1346 aa32.77■■■□□ 2.84
CBWD3-213ENST00000618217 PLEKHG1Q9ULL1 1385 aa32.76■■■□□ 2.84
CBWD3-213ENST00000618217 STAC3Q96MF2 364 aa32.76■■■□□ 2.83
CBWD3-213ENST00000618217 TONSLQ96HA7 1378 aa32.75■■■□□ 2.83
CBWD3-213ENST00000618217 NRXN1Q9ULB1 1477 aa32.75■■■□□ 2.83
CBWD3-213ENST00000618217 PPP1R15AO75807 674 aaPredicted RBP32.75■■■□□ 2.83
CBWD3-213ENST00000618217 NPHP4O75161 1426 aaPredicted RBP32.74■■■□□ 2.83
CBWD3-213ENST00000618217 KDM2AQ9Y2K7 1162 aa32.73■■■□□ 2.83
CBWD3-213ENST00000618217 TIMELESSQ9UNS1 1208 aa32.73■■■□□ 2.83
CBWD3-213ENST00000618217 IQGAP1P46940 1657 aa32.72■■■□□ 2.83
CBWD3-213ENST00000618217 NRXN3Q9Y4C0 1643 aa32.71■■■□□ 2.83
CBWD3-213ENST00000618217 SETBP1Q9Y6X0 1596 aa32.7■■■□□ 2.83
CBWD3-213ENST00000618217 PIK3C2GO75747 1445 aa32.69■■■□□ 2.82
CBWD3-213ENST00000618217 ADAMTS13Q76LX8 1427 aa32.67■■■□□ 2.82
CBWD3-213ENST00000618217 SENP3Q9H4L4 574 aaPredicted RBP32.66■■■□□ 2.82
CBWD3-213ENST00000618217 PRAG1Q86YV5 1406 aa32.63■■■□□ 2.81
CBWD3-213ENST00000618217 DMRT2Q9Y5R5 561 aa32.62■■■□□ 2.81
CBWD3-213ENST00000618217 SETD1AO15047 1707 aaKnown RBP32.61■■■□□ 2.81
CBWD3-213ENST00000618217 ALKQ9UM73 1620 aa32.61■■■□□ 2.81
CBWD3-213ENST00000618217 SLC26A8Q96RN1 970 aa32.61■■■□□ 2.81
CBWD3-213ENST00000618217 BCANQ96GW7 911 aa32.6■■■□□ 2.81
CBWD3-213ENST00000618217 TBX22Q9Y458 520 aa32.6■■■□□ 2.81
CBWD3-213ENST00000618217 DIP2AQ14689 1571 aa32.59■■■□□ 2.81
CBWD3-213ENST00000618217 C14orf93Q9H972 538 aaKnown RBP32.59■■■□□ 2.81
CBWD3-213ENST00000618217 NBPF8Q3BBV2 869 aa32.56■■■□□ 2.8
CBWD3-213ENST00000618217 LAMC1P11047 1609 aa32.55■■■□□ 2.8
CBWD3-213ENST00000618217 CFAP70Q5T0N1 1121 aa32.55■■■□□ 2.8
CBWD3-213ENST00000618217 KIAA1210Q9ULL0 1709 aa32.53■■■□□ 2.8
CBWD3-213ENST00000618217 METP08581 1390 aa32.51■■■□□ 2.8
CBWD3-213ENST00000618217 TRPM1Q7Z4N2 1603 aa32.49■■■□□ 2.79
CBWD3-213ENST00000618217 ASXL1Q8IXJ9 1541 aa32.49■■■□□ 2.79
CBWD3-213ENST00000618217 CHD2O14647 1828 aaKnown RBP32.47■■■□□ 2.79
CBWD3-213ENST00000618217 PIK3R4Q99570 1358 aa32.47■■■□□ 2.79
CBWD3-213ENST00000618217 ADGRB1O14514 1584 aa32.46■■■□□ 2.79
CBWD3-213ENST00000618217 PTPRUQ92729 1446 aa32.44■■■□□ 2.78
CBWD3-213ENST00000618217 NBPF1Q3BBV0 1214 aa32.44■■■□□ 2.78
CBWD3-213ENST00000618217 TMEM132EQ6IEE7 984 aa32.44■■■□□ 2.78
CBWD3-213ENST00000618217 STRCP1A6NGW2 1772 aa32.42■■■□□ 2.78
CBWD3-213ENST00000618217 RALGAPBQ86X10 1494 aa32.4■■■□□ 2.78
CBWD3-213ENST00000618217 NWD1Q149M9 1564 aa32.39■■■□□ 2.78
CBWD3-213ENST00000618217 ZNF335Q9H4Z2 1342 aaPredicted RBP32.39■■■□□ 2.78
CBWD3-213ENST00000618217 KCNA6P17658 529 aa32.39■■■□□ 2.78
CBWD3-213ENST00000618217 XRN1Q8IZH2 1706 aaKnown RBP32.38■■■□□ 2.77
CBWD3-213ENST00000618217 YTHDC2Q9H6S0 1430 aaKnown RBP32.36■■■□□ 2.77
CBWD3-213ENST00000618217 GPRASP1Q5JY77 1395 aa32.36■■■□□ 2.77
CBWD3-213ENST00000618217 AMOTL2Q9Y2J4 779 aa32.36■■■□□ 2.77
CBWD3-213ENST00000618217 LRPPRCP42704 1394 aaKnown RBP32.35■■■□□ 2.77
CBWD3-213ENST00000618217 ROCK2O75116 1388 aaKnown RBP32.33■■■□□ 2.77
CBWD3-213ENST00000618217 ABCC11Q96J66 1382 aa32.33■■■□□ 2.77
CBWD3-213ENST00000618217 TECPR2O15040 1411 aa32.31■■■□□ 2.76
CBWD3-213ENST00000618217 KNDC1Q76NI1 1749 aa32.31■■■□□ 2.76
CBWD3-213ENST00000618217 STK26Q9P289 416 aa32.3■■■□□ 2.76
CBWD3-213ENST00000618217 LTBP4Q8N2S1 1624 aa32.3■■■□□ 2.76
CBWD3-213ENST00000618217 NKTRP30414 1462 aaKnown RBP32.28■■■□□ 2.76
CBWD3-213ENST00000618217 CPS1P31327 1500 aa32.26■■■□□ 2.76
CBWD3-213ENST00000618217 ROBO2Q9HCK4 1378 aa32.25■■■□□ 2.75
CBWD3-213ENST00000618217 PTCH1Q13635 1447 aa32.25■■■□□ 2.75
CBWD3-213ENST00000618217 ZEB1P37275 1124 aaPredicted RBP32.25■■■□□ 2.75
CBWD3-213ENST00000618217 DLC1Q96QB1 1528 aa32.24■■■□□ 2.75
CBWD3-213ENST00000618217 SIRT1Q96EB6 747 aa32.23■■■□□ 2.75
CBWD3-213ENST00000618217 CARD11Q9BXL7 1154 aa32.23■■■□□ 2.75
CBWD3-213ENST00000618217 TRAK1Q9UPV9 953 aa32.23■■■□□ 2.75
CBWD3-213ENST00000618217 ARHGEF28Q8N1W1 1705 aaKnown RBP32.22■■■□□ 2.75
CBWD3-213ENST00000618217 LRRC7Q96NW7 1537 aa32.2■■■□□ 2.75
CBWD3-213ENST00000618217 FAM135BQ49AJ0 1406 aa32.2■■■□□ 2.75
CBWD3-213ENST00000618217 PROSER2Q86WR7 435 aaPredicted RBP32.18■■■□□ 2.74
CBWD3-213ENST00000618217 XIRP1Q702N8 1843 aaKnown RBP32.18■■■□□ 2.74
CBWD3-213ENST00000618217 WAPLQ7Z5K2 1190 aa32.16■■■□□ 2.74
CBWD3-213ENST00000618217 PLEKHH1Q9ULM0 1364 aa32.15■■■□□ 2.74
CBWD3-213ENST00000618217 RBM33Q96EV2 1170 aaKnown RBP32.14■■■□□ 2.74
CBWD3-213ENST00000618217 PRAM1Q96QH2 718 aa32.14■■■□□ 2.74
CBWD3-213ENST00000618217 TMEM94Q12767 1356 aa32.14■■■□□ 2.73
CBWD3-213ENST00000618217 NCOA3Q9Y6Q9 1424 aa32.12■■■□□ 2.73
CBWD3-213ENST00000618217 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.1■■■□□ 2.73
CBWD3-213ENST00000618217 USP47Q96K76 1375 aa32.09■■■□□ 2.73
CBWD3-213ENST00000618217 POGKQ9P215 609 aa32.08■■■□□ 2.73
CBWD3-213ENST00000618217 EIF3AQ14152 1382 aaKnown RBP32.07■■■□□ 2.72
CBWD3-213ENST00000618217 NALCNQ8IZF0 1738 aa32.06■■■□□ 2.72
CBWD3-213ENST00000618217 CENPJQ9HC77 1338 aaPredicted RBP32.06■■■□□ 2.72
CBWD3-213ENST00000618217 SAFB2Q14151 953 aaKnown RBP eCLIP32.05■■■□□ 2.72
CBWD3-213ENST00000618217 QRICH2Q9H0J4 1663 aa32.04■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms