RNA–Protein interactions for RNA: ENST00000617740.4

RUNX1T1-252, Transcript of RUNX1 translocation partner 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RUNX1T1, Length 7,627 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-252ENST00000617740 CUX2O14529 1486 aa11.49□□□□□ -0.57
RUNX1T1-252ENST00000617740 RRP9O43818 475 aaKnown RBP11.49□□□□□ -0.57
RUNX1T1-252ENST00000617740 ST20-MTHFSA0A0A6YYL1 179 aa11.49□□□□□ -0.57
RUNX1T1-252ENST00000617740 IPO7O95373 1038 aaKnown RBP11.48□□□□□ -0.57
RUNX1T1-252ENST00000617740 VPS37CA5D8V6 355 aaPredicted RBP11.48□□□□□ -0.57
RUNX1T1-252ENST00000617740 DDX19BQ9UMR2 479 aa11.48□□□□□ -0.57
RUNX1T1-252ENST00000617740 H0YHG0 523 aa11.48□□□□□ -0.57
RUNX1T1-252ENST00000617740 RDXP35241 583 aaKnown RBP11.48□□□□□ -0.57
RUNX1T1-252ENST00000617740 SMC3Q9UQE7 1217 aa11.47□□□□□ -0.57
RUNX1T1-252ENST00000617740 CCDC88BA6NC98 1476 aa11.47□□□□□ -0.57
RUNX1T1-252ENST00000617740 CHMP4AQ9BY43 222 aa11.47□□□□□ -0.57
RUNX1T1-252ENST00000617740 UQCRHLA0A096LP55 91 aa11.47□□□□□ -0.57
RUNX1T1-252ENST00000617740 MARCH6O60337 910 aa11.47□□□□□ -0.57
RUNX1T1-252ENST00000617740 UQCRHP07919 91 aa11.47□□□□□ -0.57
RUNX1T1-252ENST00000617740 INTS3Q68E01 1043 aaKnown RBP11.46□□□□□ -0.57
RUNX1T1-252ENST00000617740 APAF1O14727 1248 aa11.46□□□□□ -0.57
RUNX1T1-252ENST00000617740 CHMP4CQ96CF2 233 aa11.46□□□□□ -0.58
RUNX1T1-252ENST00000617740 TERF2IPQ9NYB0 399 aa11.46□□□□□ -0.58
RUNX1T1-252ENST00000617740 DZIP1LQ8IYY4 767 aaKnown RBP11.46□□□□□ -0.58
RUNX1T1-252ENST00000617740 ANKRD20A12PQ8NF67 263 aa11.46□□□□□ -0.58
RUNX1T1-252ENST00000617740 TSPY26PQ9H489 355 aa11.46□□□□□ -0.58
RUNX1T1-252ENST00000617740 FOSBP53539 338 aa11.45□□□□□ -0.58
RUNX1T1-252ENST00000617740 ANKRD30AQ9BXX3 1397 aa11.45□□□□□ -0.58
RUNX1T1-252ENST00000617740 RUFY2Q8WXA3 655 aa11.45□□□□□ -0.58
RUNX1T1-252ENST00000617740 HOOK1Q9UJC3 728 aaKnown RBP11.45□□□□□ -0.58
RUNX1T1-252ENST00000617740 ZKSCAN1P17029 563 aaPredicted RBP11.45□□□□□ -0.58
RUNX1T1-252ENST00000617740 LNPKQ9C0E8 428 aa11.45□□□□□ -0.58
RUNX1T1-252ENST00000617740 AKAP17AQ02040 695 aaKnown RBP11.45□□□□□ -0.58
RUNX1T1-252ENST00000617740 VPS53Q5VIR6 699 aa11.45□□□□□ -0.58
RUNX1T1-252ENST00000617740 LEKR1Q6ZMV7 388 aa11.45□□□□□ -0.58
RUNX1T1-252ENST00000617740 HMGN5P82970 282 aaKnown RBP11.45□□□□□ -0.58
RUNX1T1-252ENST00000617740 USP47Q96K76 1375 aa11.44□□□□□ -0.58
RUNX1T1-252ENST00000617740 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.44□□□□□ -0.58
RUNX1T1-252ENST00000617740 HDGFP51858 240 aaKnown RBP11.44□□□□□ -0.58
RUNX1T1-252ENST00000617740 TRIM29Q14134 588 aa11.44□□□□□ -0.58
RUNX1T1-252ENST00000617740 PDILTQ8N807 584 aa11.43□□□□□ -0.58
RUNX1T1-252ENST00000617740 SPC24Q8NBT2 197 aa11.43□□□□□ -0.58
RUNX1T1-252ENST00000617740 GRPEL1Q9HAV7 217 aa11.43□□□□□ -0.58
RUNX1T1-252ENST00000617740 MAPK8IP2Q13387 824 aaPredicted RBP11.43□□□□□ -0.58
RUNX1T1-252ENST00000617740 TRIM5Q9C035 493 aa11.43□□□□□ -0.58
RUNX1T1-252ENST00000617740 BAZ1AQ9NRL2 1556 aaPredicted RBP11.43□□□□□ -0.58
RUNX1T1-252ENST00000617740 CDR1P51861 262 aa11.43□□□□□ -0.58
RUNX1T1-252ENST00000617740 PRPF40AO75400 957 aaKnown RBP11.43□□□□□ -0.58
RUNX1T1-252ENST00000617740 LETM1O95202 739 aaPredicted RBP11.43□□□□□ -0.58
RUNX1T1-252ENST00000617740 NAP1L1P55209 391 aaKnown RBP11.43□□□□□ -0.58
RUNX1T1-252ENST00000617740 GGT6Q6P531 493 aa11.43□□□□□ -0.58
RUNX1T1-252ENST00000617740 SKIDA1Q1XH10 827 aa11.42□□□□□ -0.58
RUNX1T1-252ENST00000617740 PANK1Q8TE04 598 aa11.42□□□□□ -0.58
RUNX1T1-252ENST00000617740 CCDC73Q6ZRK6 1079 aa11.42□□□□□ -0.58
RUNX1T1-252ENST00000617740 NAT10Q9H0A0 1025 aaKnown RBP11.42□□□□□ -0.58
RUNX1T1-252ENST00000617740 CCDC191Q8NCU4 936 aa11.41□□□□□ -0.58
RUNX1T1-252ENST00000617740 CCDC27Q2M243 656 aa11.41□□□□□ -0.58
RUNX1T1-252ENST00000617740 TTLL5Q6EMB2 1281 aa11.41□□□□□ -0.58
RUNX1T1-252ENST00000617740 SYNE3Q6ZMZ3 975 aa11.41□□□□□ -0.58
RUNX1T1-252ENST00000617740 ERCC4Q92889 916 aaPredicted RBP11.41□□□□□ -0.58
RUNX1T1-252ENST00000617740 CAGE1Q8TC20 777 aa11.41□□□□□ -0.58
RUNX1T1-252ENST00000617740 CSB-PGBD3P0DP91 1061 aa11.4□□□□□ -0.58
RUNX1T1-252ENST00000617740 HSP90AB3PQ58FF7 597 aa11.4□□□□□ -0.58
RUNX1T1-252ENST00000617740 MLECQ14165 292 aa11.4□□□□□ -0.58
RUNX1T1-252ENST00000617740 ERCC6Q03468 1493 aa11.4□□□□□ -0.58
RUNX1T1-252ENST00000617740 CPLX1O14810 134 aa11.4□□□□□ -0.58
RUNX1T1-252ENST00000617740 WWC1Q8IX03 1113 aa11.4□□□□□ -0.58
RUNX1T1-252ENST00000617740 CPLX2Q6PUV4 134 aaKnown RBP11.39□□□□□ -0.59
RUNX1T1-252ENST00000617740 FBXO3Q9UK99 471 aa11.39□□□□□ -0.59
RUNX1T1-252ENST00000617740 RNF20Q5VTR2 975 aa11.39□□□□□ -0.59
RUNX1T1-252ENST00000617740 MBD3O95983 291 aa11.39□□□□□ -0.59
RUNX1T1-252ENST00000617740 OLFM4Q6UX06 510 aa11.39□□□□□ -0.59
RUNX1T1-252ENST00000617740 MPNDQ8N594 471 aa11.39□□□□□ -0.59
RUNX1T1-252ENST00000617740 CCDC18Q5T9S5 1454 aa11.39□□□□□ -0.59
RUNX1T1-252ENST00000617740 ERICH4A6NGS2 130 aa11.39□□□□□ -0.59
RUNX1T1-252ENST00000617740 DCTN1Q14203 1278 aa11.39□□□□□ -0.59
RUNX1T1-252ENST00000617740 PLCD4Q9BRC7 762 aa11.39□□□□□ -0.59
RUNX1T1-252ENST00000617740 PRDM10Q9NQV6 1147 aa11.39□□□□□ -0.59
RUNX1T1-252ENST00000617740 CNTLNQ9NXG0 1405 aa11.39□□□□□ -0.59
RUNX1T1-252ENST00000617740 CDC45O75419 566 aa11.39□□□□□ -0.59
RUNX1T1-252ENST00000617740 SMC2O95347 1197 aa11.39□□□□□ -0.59
RUNX1T1-252ENST00000617740 NUTM2DQ5VT03 806 aaPredicted RBP11.39□□□□□ -0.59
RUNX1T1-252ENST00000617740 TSPYL1Q9H0U9 437 aa11.38□□□□□ -0.59
RUNX1T1-252ENST00000617740 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.38□□□□□ -0.59
RUNX1T1-252ENST00000617740 ROCK1Q13464 1354 aa11.38□□□□□ -0.59
RUNX1T1-252ENST00000617740 ESPNB1AK53 854 aa11.38□□□□□ -0.59
RUNX1T1-252ENST00000617740 AMPHP49418 695 aa11.38□□□□□ -0.59
RUNX1T1-252ENST00000617740 CCDC47Q96A33 483 aaKnown RBP11.38□□□□□ -0.59
RUNX1T1-252ENST00000617740 LTV1Q96GA3 475 aaPredicted RBP11.38□□□□□ -0.59
RUNX1T1-252ENST00000617740 IFIT2P09913 472 aaKnown RBP11.38□□□□□ -0.59
RUNX1T1-252ENST00000617740 TRAK1Q9UPV9 953 aa11.38□□□□□ -0.59
RUNX1T1-252ENST00000617740 BACH2Q9BYV9 841 aa11.38□□□□□ -0.59
RUNX1T1-252ENST00000617740 AKNAQ7Z591 1439 aa11.38□□□□□ -0.59
RUNX1T1-252ENST00000617740 AXDND1Q5T1B0 1012 aaPredicted RBP11.37□□□□□ -0.59
RUNX1T1-252ENST00000617740 CCDC7Q96M83 1385 aa11.36□□□□□ -0.59
RUNX1T1-252ENST00000617740 MSH5O43196 834 aa11.36□□□□□ -0.59
RUNX1T1-252ENST00000617740 CECR2Q9BXF3 1484 aa11.36□□□□□ -0.59
RUNX1T1-252ENST00000617740 TAF3Q5VWG9 929 aa11.36□□□□□ -0.59
RUNX1T1-252ENST00000617740 NECTIN2Q92692 538 aa11.36□□□□□ -0.59
RUNX1T1-252ENST00000617740 SDF4Q9BRK5 362 aa11.36□□□□□ -0.59
RUNX1T1-252ENST00000617740 CCP110O43303 1012 aa11.35□□□□□ -0.59
RUNX1T1-252ENST00000617740 RIPK4P57078 832 aa11.35□□□□□ -0.59
RUNX1T1-252ENST00000617740 HNRNPMP52272 730 aaKnown RBP eCLIP11.35□□□□□ -0.59
RUNX1T1-252ENST00000617740 CCDC112Q8NEF3 446 aa11.35□□□□□ -0.59
RUNX1T1-252ENST00000617740 C9orf78Q9NZ63 289 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms