RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 NKTRP30414 1462 aaKnown RBP13.25□□□□□ -0.29
GPC6-202ENST00000617456 JCADQ9P266 1359 aa13.25□□□□□ -0.29
GPC6-202ENST00000617456 ADGRB3O60242 1522 aa13.24□□□□□ -0.29
GPC6-202ENST00000617456 NOS1P29475 1434 aa13.24□□□□□ -0.29
GPC6-202ENST00000617456 MEX3CQ5U5Q3 659 aaKnown RBP13.24□□□□□ -0.29
GPC6-202ENST00000617456 C14orf37Q86TY3 774 aa13.24□□□□□ -0.29
GPC6-202ENST00000617456 SLC52A1Q9NWF4 448 aa13.24□□□□□ -0.29
GPC6-202ENST00000617456 SETD1AO15047 1707 aaKnown RBP13.24□□□□□ -0.29
GPC6-202ENST00000617456 PHLPP1O60346 1717 aa13.24□□□□□ -0.29
GPC6-202ENST00000617456 CHGAP10645 457 aaKnown RBP13.23□□□□□ -0.29
GPC6-202ENST00000617456 KDM5AP29375 1690 aaKnown RBP13.23□□□□□ -0.29
GPC6-202ENST00000617456 NWD1Q149M9 1564 aa13.23□□□□□ -0.29
GPC6-202ENST00000617456 FGD6Q6ZV73 1430 aa13.22□□□□□ -0.29
GPC6-202ENST00000617456 NUTM2DQ5VT03 806 aaPredicted RBP13.21□□□□□ -0.29
GPC6-202ENST00000617456 TRIM52Q96A61 297 aa13.21□□□□□ -0.29
GPC6-202ENST00000617456 RIMS2Q9UQ26 1411 aa13.21□□□□□ -0.3
GPC6-202ENST00000617456 PLEKHG1Q9ULL1 1385 aa13.2□□□□□ -0.3
GPC6-202ENST00000617456 HDGFP51858 240 aaKnown RBP13.2□□□□□ -0.3
GPC6-202ENST00000617456 FAM50AQ14320 339 aaKnown RBP13.19□□□□□ -0.3
GPC6-202ENST00000617456 ZFYVE9O95405 1425 aa13.19□□□□□ -0.3
GPC6-202ENST00000617456 ZNF772Q68DY9 489 aaPredicted RBP13.18□□□□□ -0.3
GPC6-202ENST00000617456 TBX22Q9Y458 520 aa13.18□□□□□ -0.3
GPC6-202ENST00000617456 LRP6O75581 1613 aa13.17□□□□□ -0.3
GPC6-202ENST00000617456 SPATA31A6Q5VVP1 1343 aa13.17□□□□□ -0.3
GPC6-202ENST00000617456 NUTM2BA6NNL0 878 aaPredicted RBP13.17□□□□□ -0.3
GPC6-202ENST00000617456 NUTM2EB1AL46 878 aaPredicted RBP13.17□□□□□ -0.3
GPC6-202ENST00000617456 ATF3P18847 181 aa13.17□□□□□ -0.3
GPC6-202ENST00000617456 NUTM2AQ8IVF1 878 aaPredicted RBP13.17□□□□□ -0.3
GPC6-202ENST00000617456 UPF1Q92900 1129 aaKnown RBP eCLIP13.17□□□□□ -0.3
GPC6-202ENST00000617456 COL16A1Q07092 1604 aaPredicted RBP13.17□□□□□ -0.3
GPC6-202ENST00000617456 CHD2O14647 1828 aaKnown RBP13.16□□□□□ -0.3
GPC6-202ENST00000617456 ANKRD50Q9ULJ7 1429 aa13.16□□□□□ -0.3
GPC6-202ENST00000617456 CADPS2Q86UW7 1296 aa13.16□□□□□ -0.3
GPC6-202ENST00000617456 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.16□□□□□ -0.3
GPC6-202ENST00000617456 RPRD2Q5VT52 1461 aaKnown RBP13.16□□□□□ -0.3
GPC6-202ENST00000617456 MYO5BQ9ULV0 1848 aa13.16□□□□□ -0.3
GPC6-202ENST00000617456 C19orf44Q9H6X5 657 aa13.15□□□□□ -0.3
GPC6-202ENST00000617456 GCC2Q8IWJ2 1684 aa13.15□□□□□ -0.31
GPC6-202ENST00000617456 RXRBP28702 533 aa13.14□□□□□ -0.31
GPC6-202ENST00000617456 ADGRL2O95490 1459 aa13.14□□□□□ -0.31
GPC6-202ENST00000617456 NCOA3Q9Y6Q9 1424 aa13.13□□□□□ -0.31
GPC6-202ENST00000617456 TMEM131LA2VDJ0 1609 aa13.13□□□□□ -0.31
GPC6-202ENST00000617456 ADAMTS13Q76LX8 1427 aa13.13□□□□□ -0.31
GPC6-202ENST00000617456 BRINP3Q76B58 766 aa13.12□□□□□ -0.31
GPC6-202ENST00000617456 AMOTL2Q9Y2J4 779 aa13.12□□□□□ -0.31
GPC6-202ENST00000617456 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.11□□□□□ -0.31
GPC6-202ENST00000617456 ADRA2BP18089 450 aa13.11□□□□□ -0.31
GPC6-202ENST00000617456 AHDC1Q5TGY3 1603 aaPredicted RBP13.1□□□□□ -0.31
GPC6-202ENST00000617456 AFF2P51816 1311 aa13.1□□□□□ -0.31
GPC6-202ENST00000617456 ERICH6Q7L0X2 663 aa13.09□□□□□ -0.31
GPC6-202ENST00000617456 PTPRUQ92729 1446 aa13.09□□□□□ -0.31
GPC6-202ENST00000617456 PIK3R4Q99570 1358 aa13.08□□□□□ -0.31
GPC6-202ENST00000617456 SHPRHQ149N8 1683 aa13.08□□□□□ -0.32
GPC6-202ENST00000617456 DIP2AQ14689 1571 aa13.07□□□□□ -0.32
GPC6-202ENST00000617456 TRPM2O94759 1503 aa13.07□□□□□ -0.32
GPC6-202ENST00000617456 DDX17Q92841 729 aaKnown RBP13.06□□□□□ -0.32
GPC6-202ENST00000617456 C8orf37Q96NL8 207 aa13.06□□□□□ -0.32
GPC6-202ENST00000617456 E9PCH4 1651 aa13.05□□□□□ -0.32
GPC6-202ENST00000617456 ASXL1Q8IXJ9 1541 aa13.05□□□□□ -0.32
GPC6-202ENST00000617456 ZNF326Q5BKZ1 582 aaKnown RBP13.05□□□□□ -0.32
GPC6-202ENST00000617456 UNC13BO14795 1591 aa13.04□□□□□ -0.32
GPC6-202ENST00000617456 QTRT2Q9H974 415 aaKnown RBP13.04□□□□□ -0.32
GPC6-202ENST00000617456 NUP155O75694 1391 aa13.04□□□□□ -0.32
GPC6-202ENST00000617456 ITGAEP38570 1179 aa13.03□□□□□ -0.32
GPC6-202ENST00000617456 LRRC59Q96AG4 307 aaKnown RBP13.03□□□□□ -0.32
GPC6-202ENST00000617456 DCCP43146 1447 aa13.03□□□□□ -0.32
GPC6-202ENST00000617456 MST1RQ04912 1400 aa13.03□□□□□ -0.32
GPC6-202ENST00000617456 SETD5Q9C0A6 1442 aa13.03□□□□□ -0.32
GPC6-202ENST00000617456 CDK12Q9NYV4 1490 aaPredicted RBP13.03□□□□□ -0.32
GPC6-202ENST00000617456 ADAMTS2O95450 1211 aa13.02□□□□□ -0.33
GPC6-202ENST00000617456 RBM6P78332 1123 aaKnown RBP13.01□□□□□ -0.33
GPC6-202ENST00000617456 METP08581 1390 aa13.01□□□□□ -0.33
GPC6-202ENST00000617456 RGS12O14924 1447 aa13.01□□□□□ -0.33
GPC6-202ENST00000617456 ROCK1Q13464 1354 aa13□□□□□ -0.33
GPC6-202ENST00000617456 PNPLA6Q8IY17 1366 aa13□□□□□ -0.33
GPC6-202ENST00000617456 KCNA4P22459 653 aa13□□□□□ -0.33
GPC6-202ENST00000617456 NGLY1Q96IV0 654 aa13□□□□□ -0.33
GPC6-202ENST00000617456 IQGAP3Q86VI3 1631 aa12.99□□□□□ -0.33
GPC6-202ENST00000617456 PRKCSHP14314 528 aaPredicted RBP12.98□□□□□ -0.33
GPC6-202ENST00000617456 XRN1Q8IZH2 1706 aaKnown RBP12.98□□□□□ -0.33
GPC6-202ENST00000617456 NHSL1Q5SYE7 1610 aa12.98□□□□□ -0.33
GPC6-202ENST00000617456 NRXN3Q9Y4C0 1643 aa12.98□□□□□ -0.33
GPC6-202ENST00000617456 ADGRL3Q9HAR2 1447 aa12.97□□□□□ -0.33
GPC6-202ENST00000617456 SETBP1Q9Y6X0 1596 aa12.97□□□□□ -0.33
GPC6-202ENST00000617456 SRCAPQ6ZRS2 3230 aa12.95□□□□□ -0.34
GPC6-202ENST00000617456 USP21Q9UK80 565 aa12.95□□□□□ -0.34
GPC6-202ENST00000617456 C1orf167Q5SNV9 1468 aa12.94□□□□□ -0.34
GPC6-202ENST00000617456 ORAI2Q96SN7 254 aa12.94□□□□□ -0.34
GPC6-202ENST00000617456 ATAD2Q6PL18 1390 aa12.94□□□□□ -0.34
GPC6-202ENST00000617456 PPARGC1BQ86YN6 1023 aaKnown RBP12.93□□□□□ -0.34
GPC6-202ENST00000617456 NALCNQ8IZF0 1738 aa12.92□□□□□ -0.34
GPC6-202ENST00000617456 TRPC5Q9UL62 973 aaPredicted RBP12.92□□□□□ -0.34
GPC6-202ENST00000617456 SPHKAPQ2M3C7 1700 aa12.91□□□□□ -0.34
GPC6-202ENST00000617456 SOS2Q07890 1332 aaPredicted RBP12.9□□□□□ -0.34
GPC6-202ENST00000617456 NEXMIFQ5QGS0 1516 aa12.9□□□□□ -0.34
GPC6-202ENST00000617456 ZRANB1Q9UGI0 708 aa12.9□□□□□ -0.34
GPC6-202ENST00000617456 ROBO2Q9HCK4 1378 aa12.9□□□□□ -0.34
GPC6-202ENST00000617456 CLTCL1P53675 1640 aa12.88□□□□□ -0.35
GPC6-202ENST00000617456 FNBP4Q8N3X1 1017 aaPredicted RBP12.88□□□□□ -0.35
GPC6-202ENST00000617456 DAXXQ9UER7 740 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms