RNA–Protein interactions for RNA: ENST00000616856.1

TULP4-206, Transcript of tubby like protein 4, humanhuman

TSL 2

Gene TULP4, Length 2,307 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TULP4-206ENST00000616856 ESF1Q9H501 851 aaKnown RBP16.85■□□□□ 0.29
TULP4-206ENST00000616856 TRPM1Q7Z4N2 1603 aa16.85■□□□□ 0.29
TULP4-206ENST00000616856 PREX1Q8TCU6 1659 aa16.84■□□□□ 0.29
TULP4-206ENST00000616856 CNGB1Q14028 1251 aaPredicted RBP16.84■□□□□ 0.29
TULP4-206ENST00000616856 NBPF1Q3BBV0 1214 aa16.83■□□□□ 0.28
TULP4-206ENST00000616856 ADGRB3O60242 1522 aa16.83■□□□□ 0.28
TULP4-206ENST00000616856 NEURL4Q96JN8 1562 aa16.83■□□□□ 0.28
TULP4-206ENST00000616856 FAM9BQ8IZU0 186 aa16.82■□□□□ 0.28
TULP4-206ENST00000616856 MRS2Q9HD23 443 aa16.82■□□□□ 0.28
TULP4-206ENST00000616856 BCL11AQ9H165 835 aa16.82■□□□□ 0.28
TULP4-206ENST00000616856 PIK3C2BO00750 1634 aa16.82■□□□□ 0.28
TULP4-206ENST00000616856 MADDQ8WXG6 1647 aa16.81■□□□□ 0.28
TULP4-206ENST00000616856 IDI1Q13907 227 aa16.81■□□□□ 0.28
TULP4-206ENST00000616856 ERVK-7P63135 1459 aa16.8■□□□□ 0.28
TULP4-206ENST00000616856 TSHZ2Q9NRE2 1034 aa16.79■□□□□ 0.28
TULP4-206ENST00000616856 SLC52A1Q9NWF4 448 aa16.79■□□□□ 0.28
TULP4-206ENST00000616856 IFT172Q9UG01 1749 aa16.78■□□□□ 0.28
TULP4-206ENST00000616856 ADGRF5Q8IZF2 1346 aa16.78■□□□□ 0.28
TULP4-206ENST00000616856 ST20-MTHFSA0A0A6YYL1 179 aa16.78■□□□□ 0.28
TULP4-206ENST00000616856 STAC3Q96MF2 364 aa16.78■□□□□ 0.28
TULP4-206ENST00000616856 ZMYM3Q14202 1370 aa16.77■□□□□ 0.28
TULP4-206ENST00000616856 PRKCSHP14314 528 aaPredicted RBP16.76■□□□□ 0.27
TULP4-206ENST00000616856 MYOM2P54296 1465 aa16.76■□□□□ 0.27
TULP4-206ENST00000616856 GPRASP1Q5JY77 1395 aa16.76■□□□□ 0.27
TULP4-206ENST00000616856 IRX6P78412 446 aaPredicted RBP16.75■□□□□ 0.27
TULP4-206ENST00000616856 NUTM2DQ5VT03 806 aaPredicted RBP16.75■□□□□ 0.27
TULP4-206ENST00000616856 PPLO60437 1756 aa16.74■□□□□ 0.27
TULP4-206ENST00000616856 SPATA31D1Q6ZQQ2 1576 aa16.74■□□□□ 0.27
TULP4-206ENST00000616856 MYO5BQ9ULV0 1848 aa16.74■□□□□ 0.27
TULP4-206ENST00000616856 TMEM131LA2VDJ0 1609 aa16.72■□□□□ 0.27
TULP4-206ENST00000616856 CFAP70Q5T0N1 1121 aa16.72■□□□□ 0.27
TULP4-206ENST00000616856 STAG3Q9UJ98 1225 aa16.72■□□□□ 0.27
TULP4-206ENST00000616856 RPGRIP1LQ68CZ1 1315 aa16.72■□□□□ 0.27
TULP4-206ENST00000616856 LAMC1P11047 1609 aa16.72■□□□□ 0.27
TULP4-206ENST00000616856 PLPPR3Q6T4P5 718 aa16.71■□□□□ 0.27
TULP4-206ENST00000616856 NEXMIFQ5QGS0 1516 aa16.7■□□□□ 0.26
TULP4-206ENST00000616856 NRXN1Q9ULB1 1477 aa16.7■□□□□ 0.26
TULP4-206ENST00000616856 ERICH6BQ5W0A0 696 aa16.7■□□□□ 0.26
TULP4-206ENST00000616856 CEBPAP49715 358 aaPredicted RBP16.69■□□□□ 0.26
TULP4-206ENST00000616856 SENP3Q9H4L4 574 aaPredicted RBP16.69■□□□□ 0.26
TULP4-206ENST00000616856 ZBED9Q6R2W3 1325 aa16.69■□□□□ 0.26
TULP4-206ENST00000616856 KIAA1210Q9ULL0 1709 aa16.68■□□□□ 0.26
TULP4-206ENST00000616856 FER1L4A9Z1Z3 1794 aa16.68■□□□□ 0.26
TULP4-206ENST00000616856 PIK3C2GO75747 1445 aa16.68■□□□□ 0.26
TULP4-206ENST00000616856 SENP3-EIF4A1A0A087X0R7 540 aa16.68■□□□□ 0.26
TULP4-206ENST00000616856 VGFO15240 615 aaPredicted RBP16.67■□□□□ 0.26
TULP4-206ENST00000616856 TNRQ92752 1358 aa16.66■□□□□ 0.26
TULP4-206ENST00000616856 IQGAP1P46940 1657 aa16.65■□□□□ 0.26
TULP4-206ENST00000616856 A2ML1A8K2U0 1454 aa16.64■□□□□ 0.25
TULP4-206ENST00000616856 SCAF11Q99590 1463 aaKnown RBP16.64■□□□□ 0.25
TULP4-206ENST00000616856 C3P01024 1663 aa16.64■□□□□ 0.25
TULP4-206ENST00000616856 C14orf93Q9H972 538 aaKnown RBP16.63■□□□□ 0.25
TULP4-206ENST00000616856 TMEM132EQ6IEE7 984 aa16.62■□□□□ 0.25
TULP4-206ENST00000616856 TESK2Q96S53 571 aa16.62■□□□□ 0.25
TULP4-206ENST00000616856 ZFYVE9O95405 1425 aa16.6■□□□□ 0.25
TULP4-206ENST00000616856 DISP3Q9P2K9 1392 aa16.6■□□□□ 0.25
TULP4-206ENST00000616856 PNISRQ8TF01 805 aaKnown RBP16.59■□□□□ 0.25
TULP4-206ENST00000616856 EIF3AQ14152 1382 aaKnown RBP16.59■□□□□ 0.25
TULP4-206ENST00000616856 SETBP1Q9Y6X0 1596 aa16.59■□□□□ 0.25
TULP4-206ENST00000616856 RIMS2Q9UQ26 1411 aa16.59■□□□□ 0.25
TULP4-206ENST00000616856 KTN1Q86UP2 1357 aaKnown RBP16.59■□□□□ 0.25
TULP4-206ENST00000616856 ADGRB1O14514 1584 aa16.58■□□□□ 0.24
TULP4-206ENST00000616856 TRAK1Q9UPV9 953 aa16.58■□□□□ 0.24
TULP4-206ENST00000616856 RIMS1Q86UR5 1692 aaKnown RBP16.58■□□□□ 0.24
TULP4-206ENST00000616856 TMC1Q8TDI8 760 aa16.57■□□□□ 0.24
TULP4-206ENST00000616856 TMF1P82094 1093 aa16.57■□□□□ 0.24
TULP4-206ENST00000616856 UBR1Q8IWV7 1749 aa16.56■□□□□ 0.24
TULP4-206ENST00000616856 PPP4R2Q9NY27 417 aa16.55■□□□□ 0.24
TULP4-206ENST00000616856 NLRP1Q9C000 1473 aa16.55■□□□□ 0.24
TULP4-206ENST00000616856 PER1O15534 1290 aaPredicted RBP16.54■□□□□ 0.24
TULP4-206ENST00000616856 MYBBP1AQ9BQG0 1328 aaKnown RBP16.54■□□□□ 0.24
TULP4-206ENST00000616856 RALBP1Q15311 655 aa16.53■□□□□ 0.24
TULP4-206ENST00000616856 STK26Q9P289 416 aa16.52■□□□□ 0.24
TULP4-206ENST00000616856 KDM5AP29375 1690 aaKnown RBP16.52■□□□□ 0.24
TULP4-206ENST00000616856 ADAMTSL3P82987 1691 aa16.52■□□□□ 0.24
TULP4-206ENST00000616856 LRPPRCP42704 1394 aaKnown RBP16.52■□□□□ 0.24
TULP4-206ENST00000616856 ASXL1Q8IXJ9 1541 aa16.52■□□□□ 0.24
TULP4-206ENST00000616856 BRD4O60885 1362 aaPredicted RBP16.52■□□□□ 0.23
TULP4-206ENST00000616856 PARD3Q8TEW0 1356 aa16.52■□□□□ 0.23
TULP4-206ENST00000616856 TMEM2Q9UHN6 1383 aa16.52■□□□□ 0.23
TULP4-206ENST00000616856 SMG6Q86US8 1419 aaKnown RBP16.52■□□□□ 0.23
TULP4-206ENST00000616856 ALKQ9UM73 1620 aa16.51■□□□□ 0.23
TULP4-206ENST00000616856 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.51■□□□□ 0.23
TULP4-206ENST00000616856 RBM19Q9Y4C8 960 aaKnown RBP16.51■□□□□ 0.23
TULP4-206ENST00000616856 CENPJQ9HC77 1338 aaPredicted RBP16.51■□□□□ 0.23
TULP4-206ENST00000616856 MYO3AQ8NEV4 1616 aa16.5■□□□□ 0.23
TULP4-206ENST00000616856 HDGFP51858 240 aaKnown RBP16.49■□□□□ 0.23
TULP4-206ENST00000616856 CC2D1BQ5T0F9 858 aaKnown RBP16.48■□□□□ 0.23
TULP4-206ENST00000616856 PANK3Q9H999 370 aa16.48■□□□□ 0.23
TULP4-206ENST00000616856 NUDCQ9Y266 331 aa16.48■□□□□ 0.23
TULP4-206ENST00000616856 ARHGEF28Q8N1W1 1705 aaKnown RBP16.48■□□□□ 0.23
TULP4-206ENST00000616856 QRICH2Q9H0J4 1663 aa16.48■□□□□ 0.23
TULP4-206ENST00000616856 PTPRMP28827 1452 aa16.47■□□□□ 0.23
TULP4-206ENST00000616856 SAFB2Q14151 953 aaKnown RBP eCLIP16.47■□□□□ 0.23
TULP4-206ENST00000616856 B4GALNT3Q6L9W6 998 aa16.47■□□□□ 0.23
TULP4-206ENST00000616856 YTHDC2Q9H6S0 1430 aaKnown RBP16.47■□□□□ 0.23
TULP4-206ENST00000616856 NRXN3Q9Y4C0 1643 aa16.47■□□□□ 0.23
TULP4-206ENST00000616856 LTKP29376 864 aa16.46■□□□□ 0.23
TULP4-206ENST00000616856 CDCA8Q53HL2 280 aa16.46■□□□□ 0.23
TULP4-206ENST00000616856 NLRP13Q86W25 1043 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms