RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 ST18O60284 1047 aa16.62■□□□□ 0.25
PPP4R3B-205ENST00000616288 PEG3Q9GZU2 1588 aa16.62■□□□□ 0.25
PPP4R3B-205ENST00000616288 IGHDP01880 384 aa16.62■□□□□ 0.25
PPP4R3B-205ENST00000616288 LRRC9Q6ZRR7 1453 aa16.62■□□□□ 0.25
PPP4R3B-205ENST00000616288 ANKRD45Q5TZF3 282 aa16.61■□□□□ 0.25
PPP4R3B-205ENST00000616288 SPC24Q8NBT2 197 aa16.61■□□□□ 0.25
PPP4R3B-205ENST00000616288 IPO4Q8TEX9 1081 aaKnown RBP16.61■□□□□ 0.25
PPP4R3B-205ENST00000616288 DMTNQ08495 405 aa16.61■□□□□ 0.25
PPP4R3B-205ENST00000616288 GAS2L3Q86XJ1 694 aa16.61■□□□□ 0.25
PPP4R3B-205ENST00000616288 STAC3Q96MF2 364 aa16.6■□□□□ 0.25
PPP4R3B-205ENST00000616288 ZKSCAN5Q9Y2L8 839 aa16.6■□□□□ 0.25
PPP4R3B-205ENST00000616288 HTATSF1O43719 755 aaKnown RBP16.6■□□□□ 0.25
PPP4R3B-205ENST00000616288 GTF2E1P29083 439 aaPredicted RBP16.6■□□□□ 0.25
PPP4R3B-205ENST00000616288 ZNF830Q96NB3 372 aaPredicted RBP16.59■□□□□ 0.25
PPP4R3B-205ENST00000616288 ERICH3Q5RHP9 1530 aa16.59■□□□□ 0.25
PPP4R3B-205ENST00000616288 KIF16BQ96L93 1317 aa16.59■□□□□ 0.25
PPP4R3B-205ENST00000616288 TEX35Q5T0J7 233 aa16.59■□□□□ 0.25
PPP4R3B-205ENST00000616288 GOLGA6L1Q8N7Z2 621 aa16.59■□□□□ 0.25
PPP4R3B-205ENST00000616288 TSPY26PQ9H489 355 aa16.59■□□□□ 0.25
PPP4R3B-205ENST00000616288 ZRSR1Q15695 479 aaKnown RBP16.59■□□□□ 0.25
PPP4R3B-205ENST00000616288 NBPF1Q3BBV0 1214 aa16.59■□□□□ 0.25
PPP4R3B-205ENST00000616288 CERS3Q8IU89 383 aa16.59■□□□□ 0.25
PPP4R3B-205ENST00000616288 TIGD1Q96MW7 591 aa16.59■□□□□ 0.25
PPP4R3B-205ENST00000616288 CIZ1Q9ULV3 898 aaPredicted RBP16.59■□□□□ 0.25
PPP4R3B-205ENST00000616288 KDM2BQ8NHM5 1336 aa16.58■□□□□ 0.24
PPP4R3B-205ENST00000616288 CFAP53Q96M91 514 aa16.57■□□□□ 0.24
PPP4R3B-205ENST00000616288 NRDCO43847 1150 aa16.57■□□□□ 0.24
PPP4R3B-205ENST00000616288 DNAJC2Q99543 621 aaKnown RBP16.57■□□□□ 0.24
PPP4R3B-205ENST00000616288 NCOA2Q15596 1464 aa16.57■□□□□ 0.24
PPP4R3B-205ENST00000616288 TRIM6-TRIM34B2RNG4 842 aa16.56■□□□□ 0.24
PPP4R3B-205ENST00000616288 TSPY4P0CV99 314 aa16.56■□□□□ 0.24
PPP4R3B-205ENST00000616288 TSPY10P0CW01 314 aa16.56■□□□□ 0.24
PPP4R3B-205ENST00000616288 TRIM34Q9BYJ4 488 aa16.56■□□□□ 0.24
PPP4R3B-205ENST00000616288 CHMP3Q9Y3E7 222 aa16.56■□□□□ 0.24
PPP4R3B-205ENST00000616288 K7ELQ4 463 aaPredicted RBP16.56■□□□□ 0.24
PPP4R3B-205ENST00000616288 CDCA8Q53HL2 280 aa16.56■□□□□ 0.24
PPP4R3B-205ENST00000616288 RBM27Q9P2N5 1060 aaKnown RBP16.56■□□□□ 0.24
PPP4R3B-205ENST00000616288 CALCOCO1Q9P1Z2 691 aa16.55■□□□□ 0.24
PPP4R3B-205ENST00000616288 SYNJ1O43426 1573 aa16.54■□□□□ 0.24
PPP4R3B-205ENST00000616288 ANTXR1Q9H6X2 564 aa16.54■□□□□ 0.24
PPP4R3B-205ENST00000616288 TERF1P54274 439 aa16.54■□□□□ 0.24
PPP4R3B-205ENST00000616288 ZKSCAN2Q63HK3 967 aa16.53■□□□□ 0.24
PPP4R3B-205ENST00000616288 MCM5P33992 734 aa16.53■□□□□ 0.24
PPP4R3B-205ENST00000616288 GPS2Q13227 327 aa16.53■□□□□ 0.24
PPP4R3B-205ENST00000616288 EIF3AQ14152 1382 aaKnown RBP16.52■□□□□ 0.24
PPP4R3B-205ENST00000616288 U2AF2P26368 475 aaKnown RBP eCLIP16.52■□□□□ 0.241e-7■■■□□ 14.7
PPP4R3B-205ENST00000616288 NOL7Q9UMY1 257 aaKnown RBP16.52■□□□□ 0.24
PPP4R3B-205ENST00000616288 PRIMPOLQ96LW4 560 aa16.52■□□□□ 0.24
PPP4R3B-205ENST00000616288 PDE3AQ14432 1141 aa16.52■□□□□ 0.23
PPP4R3B-205ENST00000616288 KLHL40Q2TBA0 621 aa16.52■□□□□ 0.23
PPP4R3B-205ENST00000616288 CARMIL1Q5VZK9 1371 aa16.52■□□□□ 0.23
PPP4R3B-205ENST00000616288 TPD52L1Q16890 204 aaPredicted RBP16.51■□□□□ 0.23
PPP4R3B-205ENST00000616288 CCDC112Q8NEF3 446 aa16.51■□□□□ 0.23
PPP4R3B-205ENST00000616288 EIF4G1Q04637 1599 aaKnown RBP16.51■□□□□ 0.23
PPP4R3B-205ENST00000616288 MCCP23508 829 aa16.51■□□□□ 0.23
PPP4R3B-205ENST00000616288 GPATCH11Q8N954 259 aa16.51■□□□□ 0.23
PPP4R3B-205ENST00000616288 MBD3O95983 291 aa16.51■□□□□ 0.23
PPP4R3B-205ENST00000616288 ZSCAN23Q3MJ62 389 aa16.51■□□□□ 0.23
PPP4R3B-205ENST00000616288 UTP14CQ5TAP6 766 aaKnown RBP16.51■□□□□ 0.23
PPP4R3B-205ENST00000616288 FHOD3Q2V2M9 1422 aa16.51■□□□□ 0.23
PPP4R3B-205ENST00000616288 PRIM1P49642 420 aaKnown RBP16.51■□□□□ 0.23
PPP4R3B-205ENST00000616288 BAG4O95429 457 aaKnown RBP16.5■□□□□ 0.23
PPP4R3B-205ENST00000616288 DZIP1LQ8IYY4 767 aaKnown RBP16.5■□□□□ 0.23
PPP4R3B-205ENST00000616288 USP25Q9UHP3 1055 aa16.5■□□□□ 0.23
PPP4R3B-205ENST00000616288 IPO8O15397 1037 aaKnown RBP16.5■□□□□ 0.23
PPP4R3B-205ENST00000616288 ZBTB22O15209 634 aa16.5■□□□□ 0.23
PPP4R3B-205ENST00000616288 PATL2C9JE40 543 aaKnown RBP16.49■□□□□ 0.23
PPP4R3B-205ENST00000616288 FGD6Q6ZV73 1430 aa16.49■□□□□ 0.23
PPP4R3B-205ENST00000616288 GTF2F1P35269 517 aaKnown RBP eCLIP16.49■□□□□ 0.23
PPP4R3B-205ENST00000616288 NOLC1Q14978 699 aaKnown RBP eCLIP16.49■□□□□ 0.23
PPP4R3B-205ENST00000616288 CFDP1Q9UEE9 299 aaPredicted RBP16.49■□□□□ 0.23
PPP4R3B-205ENST00000616288 GNL2Q13823 731 aaKnown RBP16.49■□□□□ 0.23
PPP4R3B-205ENST00000616288 TTC12Q9H892 705 aaPredicted RBP16.49■□□□□ 0.23
PPP4R3B-205ENST00000616288 CHGAP10645 457 aaKnown RBP16.48■□□□□ 0.23
PPP4R3B-205ENST00000616288 U2AF1L5P0DN76 240 aaPredicted RBP16.48■□□□□ 0.23
PPP4R3B-205ENST00000616288 U2AF1Q01081 240 aaKnown RBP eCLIP16.48■□□□□ 0.23
PPP4R3B-205ENST00000616288 CCAR2Q8N163 923 aaKnown RBP16.48■□□□□ 0.23
PPP4R3B-205ENST00000616288 DHX29Q7Z478 1369 aaKnown RBP16.47■□□□□ 0.23
PPP4R3B-205ENST00000616288 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.47■□□□□ 0.23
PPP4R3B-205ENST00000616288 MORC1Q86VD1 984 aa16.46■□□□□ 0.23
PPP4R3B-205ENST00000616288 HS1BP3Q53T59 392 aa16.46■□□□□ 0.23
PPP4R3B-205ENST00000616288 CFAP44Q96MT7 982 aa16.46■□□□□ 0.23
PPP4R3B-205ENST00000616288 HFM1A2PYH4 1435 aa16.46■□□□□ 0.23
PPP4R3B-205ENST00000616288 NOM1Q5C9Z4 860 aaKnown RBP16.46■□□□□ 0.23
PPP4R3B-205ENST00000616288 DUSP27Q5VZP5 1158 aa16.46■□□□□ 0.23
PPP4R3B-205ENST00000616288 TSPYL1Q9H0U9 437 aa16.46■□□□□ 0.22
PPP4R3B-205ENST00000616288 RBSNQ9H1K0 784 aa16.46■□□□□ 0.22
PPP4R3B-205ENST00000616288 TIAM1Q13009 1591 aa16.45■□□□□ 0.22
PPP4R3B-205ENST00000616288 AQRO60306 1485 aaKnown RBP eCLIP16.45■□□□□ 0.222e-7■■■□□ 16.7
PPP4R3B-205ENST00000616288 USP19O94966 1318 aa16.45■□□□□ 0.22
PPP4R3B-205ENST00000616288 C17orf53Q8N3J3 647 aaPredicted RBP16.45■□□□□ 0.22
PPP4R3B-205ENST00000616288 ZFP91Q96JP5 570 aaPredicted RBP16.45■□□□□ 0.22
PPP4R3B-205ENST00000616288 CWC15Q9P013 229 aaKnown RBP16.44■□□□□ 0.22
PPP4R3B-205ENST00000616288 SKIDA1Q1XH10 827 aa16.44■□□□□ 0.22
PPP4R3B-205ENST00000616288 MYRIPQ8NFW9 859 aa16.44■□□□□ 0.22
PPP4R3B-205ENST00000616288 JARID2Q92833 1246 aaPredicted RBP16.44■□□□□ 0.22
PPP4R3B-205ENST00000616288 C16orf45Q96MC5 204 aaPredicted RBP16.44■□□□□ 0.22
PPP4R3B-205ENST00000616288 RTF1Q92541 710 aaKnown RBP16.44■□□□□ 0.22
PPP4R3B-205ENST00000616288 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.44■□□□□ 0.22
PPP4R3B-205ENST00000616288 DDX19BQ9UMR2 479 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms