RNA–Protein interactions for RNA: ENST00000616253.1

AL353770.3-201, humanhuman

TSL 1 (best) BASIC

Gene AL353770.3, Length 1,988 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL353770.3-201ENST00000616253 CLTCQ00610 1675 aaKnown RBP13.93□□□□□ -0.18
AL353770.3-201ENST00000616253 ARID4BQ4LE39 1312 aaPredicted RBP13.92□□□□□ -0.18
AL353770.3-201ENST00000616253 CHGAP10645 457 aaKnown RBP13.92□□□□□ -0.18
AL353770.3-201ENST00000616253 POLR3GLQ9BT43 218 aa13.91□□□□□ -0.18
AL353770.3-201ENST00000616253 NRXN1Q9ULB1 1477 aa13.9□□□□□ -0.18
AL353770.3-201ENST00000616253 ADGRF5Q8IZF2 1346 aa13.9□□□□□ -0.18
AL353770.3-201ENST00000616253 CCER2I3L3R5 266 aa13.89□□□□□ -0.19
AL353770.3-201ENST00000616253 PPP6R1Q9UPN7 881 aa13.89□□□□□ -0.19
AL353770.3-201ENST00000616253 MYO5BQ9ULV0 1848 aa13.88□□□□□ -0.19
AL353770.3-201ENST00000616253 ERVK-7P63135 1459 aa13.88□□□□□ -0.19
AL353770.3-201ENST00000616253 SCAF11Q99590 1463 aaKnown RBP13.87□□□□□ -0.19
AL353770.3-201ENST00000616253 MLECQ14165 292 aa13.87□□□□□ -0.19
AL353770.3-201ENST00000616253 NEXMIFQ5QGS0 1516 aa13.86□□□□□ -0.19
AL353770.3-201ENST00000616253 TESK2Q96S53 571 aa13.85□□□□□ -0.19
AL353770.3-201ENST00000616253 RPGRIP1LQ68CZ1 1315 aa13.85□□□□□ -0.19
AL353770.3-201ENST00000616253 TMEM131LA2VDJ0 1609 aa13.85□□□□□ -0.19
AL353770.3-201ENST00000616253 IDI1Q13907 227 aa13.85□□□□□ -0.19
AL353770.3-201ENST00000616253 CFAP70Q5T0N1 1121 aa13.85□□□□□ -0.19
AL353770.3-201ENST00000616253 SLC52A1Q9NWF4 448 aa13.85□□□□□ -0.19
AL353770.3-201ENST00000616253 PIK3C2GO75747 1445 aa13.85□□□□□ -0.19
AL353770.3-201ENST00000616253 FBXO31Q5XUX0 539 aaPredicted RBP13.84□□□□□ -0.19
AL353770.3-201ENST00000616253 FBXO41Q8TF61 875 aa13.84□□□□□ -0.19
AL353770.3-201ENST00000616253 DISP3Q9P2K9 1392 aa13.84□□□□□ -0.19
AL353770.3-201ENST00000616253 SPATA31D1Q6ZQQ2 1576 aa13.83□□□□□ -0.19
AL353770.3-201ENST00000616253 EIF3AQ14152 1382 aaKnown RBP13.83□□□□□ -0.2
AL353770.3-201ENST00000616253 SETBP1Q9Y6X0 1596 aa13.83□□□□□ -0.2
AL353770.3-201ENST00000616253 PRKRIP1Q9H875 184 aaPredicted RBP13.82□□□□□ -0.2
AL353770.3-201ENST00000616253 TMF1P82094 1093 aa13.8□□□□□ -0.2
AL353770.3-201ENST00000616253 ADGRB1O14514 1584 aa13.79□□□□□ -0.2
AL353770.3-201ENST00000616253 NUTM2DQ5VT03 806 aaPredicted RBP13.79□□□□□ -0.2
AL353770.3-201ENST00000616253 ESF1Q9H501 851 aaKnown RBP13.79□□□□□ -0.2
AL353770.3-201ENST00000616253 MYO3AQ8NEV4 1616 aa13.79□□□□□ -0.2
AL353770.3-201ENST00000616253 C14orf93Q9H972 538 aaKnown RBP13.78□□□□□ -0.2
AL353770.3-201ENST00000616253 VGFO15240 615 aaPredicted RBP13.78□□□□□ -0.2
AL353770.3-201ENST00000616253 ZFYVE9O95405 1425 aa13.77□□□□□ -0.21
AL353770.3-201ENST00000616253 ZMYM3Q14202 1370 aa13.77□□□□□ -0.21
AL353770.3-201ENST00000616253 KDM5AP29375 1690 aaKnown RBP13.75□□□□□ -0.21
AL353770.3-201ENST00000616253 ADAMTSL3P82987 1691 aa13.75□□□□□ -0.21
AL353770.3-201ENST00000616253 A2ML1A8K2U0 1454 aa13.74□□□□□ -0.21
AL353770.3-201ENST00000616253 STAG3Q9UJ98 1225 aa13.74□□□□□ -0.21
AL353770.3-201ENST00000616253 QRICH2Q9H0J4 1663 aa13.74□□□□□ -0.21
AL353770.3-201ENST00000616253 PTPRMP28827 1452 aa13.74□□□□□ -0.21
AL353770.3-201ENST00000616253 CNGB1Q14028 1251 aaPredicted RBP13.74□□□□□ -0.21
AL353770.3-201ENST00000616253 MYOM1P52179 1685 aa13.73□□□□□ -0.21
AL353770.3-201ENST00000616253 CCDC184Q52MB2 194 aa13.73□□□□□ -0.21
AL353770.3-201ENST00000616253 SCAF1Q9H7N4 1312 aaKnown RBP13.73□□□□□ -0.21
AL353770.3-201ENST00000616253 ARHGEF28Q8N1W1 1705 aaKnown RBP13.73□□□□□ -0.21
AL353770.3-201ENST00000616253 CDCA8Q53HL2 280 aa13.72□□□□□ -0.21
AL353770.3-201ENST00000616253 TMEM132EQ6IEE7 984 aa13.72□□□□□ -0.21
AL353770.3-201ENST00000616253 ASXL1Q8IXJ9 1541 aa13.72□□□□□ -0.21
AL353770.3-201ENST00000616253 TRAK1Q9UPV9 953 aa13.72□□□□□ -0.21
AL353770.3-201ENST00000616253 FER1L4A9Z1Z3 1794 aa13.72□□□□□ -0.21
AL353770.3-201ENST00000616253 MRS2Q9HD23 443 aa13.71□□□□□ -0.21
AL353770.3-201ENST00000616253 CENPJQ9HC77 1338 aaPredicted RBP13.71□□□□□ -0.21
AL353770.3-201ENST00000616253 TNRQ92752 1358 aa13.71□□□□□ -0.21
AL353770.3-201ENST00000616253 SBNO2Q9Y2G9 1366 aa13.71□□□□□ -0.21
AL353770.3-201ENST00000616253 PANK3Q9H999 370 aa13.7□□□□□ -0.22
AL353770.3-201ENST00000616253 RIMS2Q9UQ26 1411 aa13.7□□□□□ -0.22
AL353770.3-201ENST00000616253 SLC24A1O60721 1099 aa13.69□□□□□ -0.22
AL353770.3-201ENST00000616253 SENP3Q9H4L4 574 aaPredicted RBP13.69□□□□□ -0.22
AL353770.3-201ENST00000616253 ALKQ9UM73 1620 aa13.69□□□□□ -0.22
AL353770.3-201ENST00000616253 PELP1Q8IZL8 1130 aaKnown RBP13.69□□□□□ -0.22
AL353770.3-201ENST00000616253 C3P01024 1663 aa13.69□□□□□ -0.22
AL353770.3-201ENST00000616253 KTN1Q86UP2 1357 aaKnown RBP13.68□□□□□ -0.22
AL353770.3-201ENST00000616253 PER1O15534 1290 aaPredicted RBP13.68□□□□□ -0.22
AL353770.3-201ENST00000616253 UBR1Q8IWV7 1749 aa13.68□□□□□ -0.22
AL353770.3-201ENST00000616253 RALBP1Q15311 655 aa13.67□□□□□ -0.22
AL353770.3-201ENST00000616253 GTF3C3Q9Y5Q9 886 aa13.67□□□□□ -0.22
AL353770.3-201ENST00000616253 SETD1AO15047 1707 aaKnown RBP13.66□□□□□ -0.22
AL353770.3-201ENST00000616253 PARD3Q8TEW0 1356 aa13.66□□□□□ -0.22
AL353770.3-201ENST00000616253 MYBBP1AQ9BQG0 1328 aaKnown RBP13.65□□□□□ -0.22
AL353770.3-201ENST00000616253 YTHDC2Q9H6S0 1430 aaKnown RBP13.64□□□□□ -0.23
AL353770.3-201ENST00000616253 FAM9BQ8IZU0 186 aa13.64□□□□□ -0.23
AL353770.3-201ENST00000616253 NRXN3Q9Y4C0 1643 aa13.64□□□□□ -0.23
AL353770.3-201ENST00000616253 LMTK3Q96Q04 1460 aa13.63□□□□□ -0.23
AL353770.3-201ENST00000616253 NLRP1Q9C000 1473 aa13.63□□□□□ -0.23
AL353770.3-201ENST00000616253 TULP4Q9NRJ4 1543 aa13.63□□□□□ -0.23
AL353770.3-201ENST00000616253 CEBPAP49715 358 aaPredicted RBP13.63□□□□□ -0.23
AL353770.3-201ENST00000616253 HNRNPUQ00839 825 aaKnown RBP eCLIP13.63□□□□□ -0.23
AL353770.3-201ENST00000616253 CC2D1BQ5T0F9 858 aaKnown RBP13.63□□□□□ -0.23
AL353770.3-201ENST00000616253 STK26Q9P289 416 aa13.63□□□□□ -0.23
AL353770.3-201ENST00000616253 BRD4O60885 1362 aaPredicted RBP13.62□□□□□ -0.23
AL353770.3-201ENST00000616253 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.62□□□□□ -0.23
AL353770.3-201ENST00000616253 KNSTRNQ9Y448 316 aa13.61□□□□□ -0.23
AL353770.3-201ENST00000616253 TMEM2Q9UHN6 1383 aa13.61□□□□□ -0.23
AL353770.3-201ENST00000616253 SAFB2Q14151 953 aaKnown RBP eCLIP13.6□□□□□ -0.23
AL353770.3-201ENST00000616253 PLPPR3Q6T4P5 718 aa13.6□□□□□ -0.23
AL353770.3-201ENST00000616253 TMC1Q8TDI8 760 aa13.6□□□□□ -0.23
AL353770.3-201ENST00000616253 NLRP13Q86W25 1043 aa13.59□□□□□ -0.23
AL353770.3-201ENST00000616253 RIMS1Q86UR5 1692 aaKnown RBP13.59□□□□□ -0.23
AL353770.3-201ENST00000616253 EVC2Q86UK5 1308 aa13.59□□□□□ -0.23
AL353770.3-201ENST00000616253 AMER1Q5JTC6 1135 aaPredicted RBP13.58□□□□□ -0.24
AL353770.3-201ENST00000616253 DLC1Q96QB1 1528 aa13.58□□□□□ -0.24
AL353770.3-201ENST00000616253 HDGFP51858 240 aaKnown RBP13.58□□□□□ -0.24
AL353770.3-201ENST00000616253 PRAM1Q96QH2 718 aa13.58□□□□□ -0.24
AL353770.3-201ENST00000616253 LRPPRCP42704 1394 aaKnown RBP13.57□□□□□ -0.24
AL353770.3-201ENST00000616253 NPC1L1Q9UHC9 1359 aa13.56□□□□□ -0.24
AL353770.3-201ENST00000616253 POGKQ9P215 609 aa13.56□□□□□ -0.24
AL353770.3-201ENST00000616253 PNISRQ8TF01 805 aaKnown RBP13.56□□□□□ -0.24
AL353770.3-201ENST00000616253 KNDC1Q76NI1 1749 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms