RNA–Protein interactions for RNA: ENST00000616170.4

SH3GLB1-205, Transcript of SH3 domain containing GRB2 like, endophilin B1, humanhuman

TSL 1 (best) BASIC

Gene SH3GLB1, Length 6,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GLB1-205ENST00000616170 HOMER1Q86YM7 354 aa11.4□□□□□ -0.58
SH3GLB1-205ENST00000616170 CSB-PGBD3P0DP91 1061 aa11.4□□□□□ -0.58
SH3GLB1-205ENST00000616170 CCDC7Q96M83 1385 aa11.4□□□□□ -0.58
SH3GLB1-205ENST00000616170 CNTLNQ9NXG0 1405 aa11.4□□□□□ -0.59
SH3GLB1-205ENST00000616170 CCDC34Q96HJ3 373 aa11.4□□□□□ -0.59
SH3GLB1-205ENST00000616170 DDX19BQ9UMR2 479 aa11.4□□□□□ -0.59
SH3GLB1-205ENST00000616170 LMOD3Q0VAK6 560 aa11.39□□□□□ -0.59
SH3GLB1-205ENST00000616170 PRKCSHP14314 528 aaPredicted RBP11.39□□□□□ -0.59
SH3GLB1-205ENST00000616170 BICD2Q8TD16 824 aa11.39□□□□□ -0.59
SH3GLB1-205ENST00000616170 TDRD9Q8NDG6 1382 aaKnown RBP11.39□□□□□ -0.59
SH3GLB1-205ENST00000616170 VPS37CA5D8V6 355 aaPredicted RBP11.39□□□□□ -0.59
SH3GLB1-205ENST00000616170 CAVIN1Q6NZI2 390 aaKnown RBP11.38□□□□□ -0.59
SH3GLB1-205ENST00000616170 CCDC144AA2RUR9 1427 aa11.38□□□□□ -0.59
SH3GLB1-205ENST00000616170 DIAPH3Q9NSV4 1193 aa11.38□□□□□ -0.59
SH3GLB1-205ENST00000616170 WASHC2AQ641Q2 1341 aa11.38□□□□□ -0.59
SH3GLB1-205ENST00000616170 REC8O95072 547 aa11.38□□□□□ -0.59
SH3GLB1-205ENST00000616170 TEX35Q5T0J7 233 aa11.37□□□□□ -0.59
SH3GLB1-205ENST00000616170 HDGFP51858 240 aaKnown RBP11.37□□□□□ -0.59
SH3GLB1-205ENST00000616170 GPS2Q13227 327 aa11.37□□□□□ -0.59
SH3GLB1-205ENST00000616170 MSH5O43196 834 aa11.37□□□□□ -0.59
SH3GLB1-205ENST00000616170 AMPHP49418 695 aa11.37□□□□□ -0.59
SH3GLB1-205ENST00000616170 KIF3AQ9Y496 699 aa11.37□□□□□ -0.59
SH3GLB1-205ENST00000616170 CCDC39Q9UFE4 941 aa11.36□□□□□ -0.59
SH3GLB1-205ENST00000616170 PRM3Q9NNZ6 103 aa11.36□□□□□ -0.59
SH3GLB1-205ENST00000616170 NUCB2P80303 420 aa11.36□□□□□ -0.59
SH3GLB1-205ENST00000616170 MPNDQ8N594 471 aa11.36□□□□□ -0.59
SH3GLB1-205ENST00000616170 RIPK4P57078 832 aa11.35□□□□□ -0.59
SH3GLB1-205ENST00000616170 NCAPD3P42695 1498 aa11.35□□□□□ -0.59
SH3GLB1-205ENST00000616170 TSR1Q2NL82 804 aaKnown RBP11.35□□□□□ -0.59
SH3GLB1-205ENST00000616170 ATAD2BQ9ULI0 1458 aa11.35□□□□□ -0.59
SH3GLB1-205ENST00000616170 UNC13AQ9UPW8 1703 aa11.35□□□□□ -0.59
SH3GLB1-205ENST00000616170 SASS6Q6UVJ0 657 aa11.34□□□□□ -0.59
SH3GLB1-205ENST00000616170 INTS3Q68E01 1043 aaKnown RBP11.34□□□□□ -0.59
SH3GLB1-205ENST00000616170 SMC3Q9UQE7 1217 aa11.34□□□□□ -0.59
SH3GLB1-205ENST00000616170 CCDC27Q2M243 656 aa11.34□□□□□ -0.59
SH3GLB1-205ENST00000616170 TPM2P07951 284 aa11.34□□□□□ -0.59
SH3GLB1-205ENST00000616170 EIF2S2P20042 333 aaKnown RBP11.34□□□□□ -0.59
SH3GLB1-205ENST00000616170 NGEFQ8N5V2 710 aa11.33□□□□□ -0.6
SH3GLB1-205ENST00000616170 ADAMTS8Q9UP79 889 aa11.33□□□□□ -0.6
SH3GLB1-205ENST00000616170 PRPF40AO75400 957 aaKnown RBP11.33□□□□□ -0.6
SH3GLB1-205ENST00000616170 SMARCA2P51531 1590 aa11.33□□□□□ -0.6
SH3GLB1-205ENST00000616170 TPM1P09493 284 aa11.32□□□□□ -0.6
SH3GLB1-205ENST00000616170 NGDNQ8NEJ9 315 aaKnown RBP11.32□□□□□ -0.6
SH3GLB1-205ENST00000616170 PCMTD1Q96MG8 357 aaPredicted RBP11.32□□□□□ -0.6
SH3GLB1-205ENST00000616170 CARMIL2Q6F5E8 1435 aa11.32□□□□□ -0.6
SH3GLB1-205ENST00000616170 VPS53Q5VIR6 699 aa11.31□□□□□ -0.6
SH3GLB1-205ENST00000616170 EFCAB2Q5VUJ9 269 aa11.31□□□□□ -0.6
SH3GLB1-205ENST00000616170 MNS1Q8NEH6 495 aa11.31□□□□□ -0.6
SH3GLB1-205ENST00000616170 BACH2Q9BYV9 841 aa11.31□□□□□ -0.6
SH3GLB1-205ENST00000616170 ZKSCAN1P17029 563 aaPredicted RBP11.31□□□□□ -0.6
SH3GLB1-205ENST00000616170 RUNDC1Q96C34 613 aa11.31□□□□□ -0.6
SH3GLB1-205ENST00000616170 HDAC5Q9UQL6 1122 aa11.31□□□□□ -0.6
SH3GLB1-205ENST00000616170 SPC24Q8NBT2 197 aa11.31□□□□□ -0.6
SH3GLB1-205ENST00000616170 PDZRN3Q9UPQ7 1066 aa11.31□□□□□ -0.6
SH3GLB1-205ENST00000616170 MARCH6O60337 910 aa11.31□□□□□ -0.6
SH3GLB1-205ENST00000616170 CCDC70Q6NSX1 233 aa11.31□□□□□ -0.6
SH3GLB1-205ENST00000616170 CCDC173Q0VFZ6 552 aa11.3□□□□□ -0.6
SH3GLB1-205ENST00000616170 RUFY2Q8WXA3 655 aa11.3□□□□□ -0.6
SH3GLB1-205ENST00000616170 MINK1Q8N4C8 1332 aaPredicted RBP11.3□□□□□ -0.6
SH3GLB1-205ENST00000616170 CCDC184Q52MB2 194 aa11.3□□□□□ -0.6
SH3GLB1-205ENST00000616170 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.3□□□□□ -0.6
SH3GLB1-205ENST00000616170 HMGXB3Q12766 1538 aa11.3□□□□□ -0.6
SH3GLB1-205ENST00000616170 IFIT2P09913 472 aaKnown RBP11.29□□□□□ -0.6
SH3GLB1-205ENST00000616170 KDM4AO75164 1064 aa11.29□□□□□ -0.6
SH3GLB1-205ENST00000616170 CDC45O75419 566 aa11.29□□□□□ -0.6
SH3GLB1-205ENST00000616170 HMOX1P09601 288 aa11.29□□□□□ -0.6
SH3GLB1-205ENST00000616170 CEP89Q96ST8 783 aa11.29□□□□□ -0.6
SH3GLB1-205ENST00000616170 C1orf115Q9H7X2 142 aa11.29□□□□□ -0.6
SH3GLB1-205ENST00000616170 TSPY26PQ9H489 355 aa11.29□□□□□ -0.6
SH3GLB1-205ENST00000616170 DIAPH1O60610 1272 aaKnown RBP11.29□□□□□ -0.6
SH3GLB1-205ENST00000616170 GRPEL1Q9HAV7 217 aa11.29□□□□□ -0.6
SH3GLB1-205ENST00000616170 WASHC2CQ9Y4E1 1318 aa11.29□□□□□ -0.6
SH3GLB1-205ENST00000616170 BCAR3O75815 825 aa11.29□□□□□ -0.6
SH3GLB1-205ENST00000616170 C9orf78Q9NZ63 289 aaPredicted RBP11.29□□□□□ -0.6
SH3GLB1-205ENST00000616170 MAP7D2Q96T17 732 aa11.28□□□□□ -0.6
SH3GLB1-205ENST00000616170 ARGLU1Q9NWB6 273 aaPredicted RBP11.28□□□□□ -0.6
SH3GLB1-205ENST00000616170 AKAP17AQ02040 695 aaKnown RBP11.28□□□□□ -0.6
SH3GLB1-205ENST00000616170 COG3Q96JB2 828 aa11.28□□□□□ -0.6
SH3GLB1-205ENST00000616170 UQCRHLA0A096LP55 91 aa11.28□□□□□ -0.6
SH3GLB1-205ENST00000616170 UQCRHP07919 91 aa11.28□□□□□ -0.6
SH3GLB1-205ENST00000616170 SKAP1Q86WV1 359 aa11.28□□□□□ -0.6
SH3GLB1-205ENST00000616170 CHMP4AQ9BY43 222 aa11.28□□□□□ -0.6
SH3GLB1-205ENST00000616170 TTLL5Q6EMB2 1281 aa11.28□□□□□ -0.6
SH3GLB1-205ENST00000616170 PDILTQ8N807 584 aa11.28□□□□□ -0.6
SH3GLB1-205ENST00000616170 WWC1Q8IX03 1113 aa11.27□□□□□ -0.6
SH3GLB1-205ENST00000616170 TRIM29Q14134 588 aa11.27□□□□□ -0.61
SH3GLB1-205ENST00000616170 API5Q9BZZ5 524 aaKnown RBP11.27□□□□□ -0.61
SH3GLB1-205ENST00000616170 EVC2Q86UK5 1308 aa11.27□□□□□ -0.61
SH3GLB1-205ENST00000616170 FKBP5Q13451 457 aaPredicted RBP11.27□□□□□ -0.61
SH3GLB1-205ENST00000616170 TRIM5Q9C035 493 aa11.27□□□□□ -0.61
SH3GLB1-205ENST00000616170 CPLX1O14810 134 aa11.27□□□□□ -0.61
SH3GLB1-205ENST00000616170 MTERF4Q7Z6M4 381 aaKnown RBP11.27□□□□□ -0.61
SH3GLB1-205ENST00000616170 MAPK8IP2Q13387 824 aaPredicted RBP11.26□□□□□ -0.61
SH3GLB1-205ENST00000616170 BRD4O60885 1362 aaPredicted RBP11.26□□□□□ -0.61
SH3GLB1-205ENST00000616170 APPP05067 770 aa11.26□□□□□ -0.61
SH3GLB1-205ENST00000616170 SKIDA1Q1XH10 827 aa11.26□□□□□ -0.61
SH3GLB1-205ENST00000616170 CCDC73Q6ZRK6 1079 aa11.26□□□□□ -0.61
SH3GLB1-205ENST00000616170 NOM1Q5C9Z4 860 aaKnown RBP11.25□□□□□ -0.61
SH3GLB1-205ENST00000616170 SYNE3Q6ZMZ3 975 aa11.25□□□□□ -0.61
SH3GLB1-205ENST00000616170 NEK4P51957 841 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms