RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 SEPT7Q16181 437 aaKnown RBP15.39■□□□□ 0.05
TCF4-248ENST00000616053 RSPH4AQ5TD94 716 aa15.39■□□□□ 0.05
TCF4-248ENST00000616053 TCERG1O14776 1098 aaKnown RBP15.39■□□□□ 0.05
TCF4-248ENST00000616053 RFX1P22670 979 aa15.39■□□□□ 0.05
TCF4-248ENST00000616053 KRT18P05783 430 aaKnown RBP15.38■□□□□ 0.05
TCF4-248ENST00000616053 CDK5RAP3Q96JB5 506 aa15.38■□□□□ 0.05
TCF4-248ENST00000616053 ST18O60284 1047 aa15.38■□□□□ 0.05
TCF4-248ENST00000616053 DCTN1Q14203 1278 aa15.37■□□□□ 0.05
TCF4-248ENST00000616053 NUTM2DQ5VT03 806 aaPredicted RBP15.37■□□□□ 0.05
TCF4-248ENST00000616053 EIF2S2P20042 333 aaKnown RBP15.37■□□□□ 0.05
TCF4-248ENST00000616053 NOP2P46087 812 aaKnown RBP15.37■□□□□ 0.05
TCF4-248ENST00000616053 FOXD4L1Q9NU39 408 aa15.37■□□□□ 0.05
TCF4-248ENST00000616053 MFAP1P55081 439 aaKnown RBP15.37■□□□□ 0.05
TCF4-248ENST00000616053 SCLT1Q96NL6 688 aa15.37■□□□□ 0.05
TCF4-248ENST00000616053 DNAI2Q9GZS0 605 aa15.37■□□□□ 0.05
TCF4-248ENST00000616053 IPO9Q96P70 1041 aaKnown RBP15.36■□□□□ 0.05
TCF4-248ENST00000616053 DIAPH3Q9NSV4 1193 aa15.36■□□□□ 0.05
TCF4-248ENST00000616053 PLIN1O60240 522 aa15.36■□□□□ 0.05
TCF4-248ENST00000616053 NUTM2BA6NNL0 878 aaPredicted RBP15.36■□□□□ 0.05
TCF4-248ENST00000616053 NUTM2EB1AL46 878 aaPredicted RBP15.36■□□□□ 0.05
TCF4-248ENST00000616053 NUTM2AQ8IVF1 878 aaPredicted RBP15.36■□□□□ 0.05
TCF4-248ENST00000616053 FAM177BA6PVY3 158 aa15.35■□□□□ 0.05
TCF4-248ENST00000616053 SKIDA1Q1XH10 827 aa15.35■□□□□ 0.05
TCF4-248ENST00000616053 EZRP15311 586 aaKnown RBP15.35■□□□□ 0.05
TCF4-248ENST00000616053 GRM1Q13255 1194 aa15.34■□□□□ 0.05
TCF4-248ENST00000616053 C16orf71Q8IYS4 520 aaPredicted RBP15.34■□□□□ 0.05
TCF4-248ENST00000616053 DDX58O95786 925 aaKnown RBP15.34■□□□□ 0.05
TCF4-248ENST00000616053 ZNF592Q92610 1267 aa15.34■□□□□ 0.05
TCF4-248ENST00000616053 CRBNQ96SW2 442 aa15.33■□□□□ 0.05
TCF4-248ENST00000616053 XBP1P17861 261 aa15.33■□□□□ 0.04
TCF4-248ENST00000616053 HOMER2Q9NSB8 354 aa15.33■□□□□ 0.04
TCF4-248ENST00000616053 FOXD4L6Q3SYB3 417 aaPredicted RBP15.32■□□□□ 0.04
TCF4-248ENST00000616053 FOXD4L3Q6VB84 417 aaPredicted RBP15.32■□□□□ 0.04
TCF4-248ENST00000616053 PLCD4Q9BRC7 762 aa15.32■□□□□ 0.04
TCF4-248ENST00000616053 ATP6V1DQ9Y5K8 247 aa15.32■□□□□ 0.04
TCF4-248ENST00000616053 PIP4K2BP78356 416 aa15.32■□□□□ 0.04
TCF4-248ENST00000616053 SLC3A2P08195 630 aaKnown RBP15.31■□□□□ 0.04
TCF4-248ENST00000616053 WDR78Q5VTH9 848 aa15.31■□□□□ 0.04
TCF4-248ENST00000616053 NOP58Q9Y2X3 529 aaKnown RBP15.31■□□□□ 0.04
TCF4-248ENST00000616053 PSMD1Q99460 953 aa15.3■□□□□ 0.04
TCF4-248ENST00000616053 IFIT2P09913 472 aaKnown RBP15.3■□□□□ 0.04
TCF4-248ENST00000616053 CAGE1Q8TC20 777 aa15.3■□□□□ 0.04
TCF4-248ENST00000616053 CCNB3Q8WWL7 1395 aa15.3■□□□□ 0.04
TCF4-248ENST00000616053 ZSCAN29Q8IWY8 852 aaPredicted RBP15.3■□□□□ 0.04
TCF4-248ENST00000616053 RUFY2Q8WXA3 655 aa15.3■□□□□ 0.04
TCF4-248ENST00000616053 COMMD10Q9Y6G5 202 aa15.29■□□□□ 0.04
TCF4-248ENST00000616053 RALYLQ86SE5 291 aaKnown RBP15.29■□□□□ 0.04
TCF4-248ENST00000616053 ZMYND15Q9H091 742 aa15.29■□□□□ 0.04
TCF4-248ENST00000616053 WASHC2CQ9Y4E1 1318 aa15.28■□□□□ 0.04
TCF4-248ENST00000616053 CLIP1P30622 1438 aa15.28■□□□□ 0.04
TCF4-248ENST00000616053 STAC3Q96MF2 364 aa15.28■□□□□ 0.04
TCF4-248ENST00000616053 ZKSCAN1P17029 563 aaPredicted RBP15.28■□□□□ 0.04
TCF4-248ENST00000616053 WASHC4Q2M389 1173 aa15.28■□□□□ 0.04
TCF4-248ENST00000616053 RAPGEF4Q8WZA2 1011 aa15.28■□□□□ 0.04
TCF4-248ENST00000616053 PABPN1LA6NDY0 278 aaKnown RBP15.27■□□□□ 0.04
TCF4-248ENST00000616053 FOSBP53539 338 aa15.27■□□□□ 0.04
TCF4-248ENST00000616053 ENOX2Q16206 610 aaKnown RBP15.27■□□□□ 0.04
TCF4-248ENST00000616053 PMFBP1Q8TBY8 1022 aa15.27■□□□□ 0.04
TCF4-248ENST00000616053 CHMP5Q9NZZ3 219 aa15.27■□□□□ 0.04
TCF4-248ENST00000616053 ANO2Q9NQ90 1003 aa15.27■□□□□ 0.04
TCF4-248ENST00000616053 ZHX3Q9H4I2 956 aa15.27■□□□□ 0.03
TCF4-248ENST00000616053 G3BP1Q13283 466 aaKnown RBP eCLIP15.26■□□□□ 0.03
TCF4-248ENST00000616053 NEUROD6Q96NK8 337 aa15.26■□□□□ 0.03
TCF4-248ENST00000616053 NECTIN2Q92692 538 aa15.25■□□□□ 0.03
TCF4-248ENST00000616053 COG3Q96JB2 828 aa15.25■□□□□ 0.03
TCF4-248ENST00000616053 TEX35Q5T0J7 233 aa15.25■□□□□ 0.03
TCF4-248ENST00000616053 ACBD3Q9H3P7 528 aa15.25■□□□□ 0.03
TCF4-248ENST00000616053 SART3Q15020 963 aaKnown RBP15.25■□□□□ 0.03
TCF4-248ENST00000616053 BICD2Q8TD16 824 aa15.24■□□□□ 0.03
TCF4-248ENST00000616053 ANAPC15P60006 121 aa15.24■□□□□ 0.03
TCF4-248ENST00000616053 KDM4AO75164 1064 aa15.24■□□□□ 0.03
TCF4-248ENST00000616053 RNF20Q5VTR2 975 aa15.23■□□□□ 0.03
TCF4-248ENST00000616053 UQCRHLA0A096LP55 91 aa15.23■□□□□ 0.03
TCF4-248ENST00000616053 EIF3AQ14152 1382 aaKnown RBP15.23■□□□□ 0.03
TCF4-248ENST00000616053 ERLIN2O94905 339 aa15.23■□□□□ 0.03
TCF4-248ENST00000616053 KIF6Q6ZMV9 814 aa15.23■□□□□ 0.03
TCF4-248ENST00000616053 ERC1Q8IUD2 1116 aa15.23■□□□□ 0.03
TCF4-248ENST00000616053 TMOD2Q9NZR1 351 aa15.23■□□□□ 0.03
TCF4-248ENST00000616053 CCDC181Q5TID7 509 aa15.22■□□□□ 0.03
TCF4-248ENST00000616053 RBM42Q9BTD8 480 aaKnown RBP15.22■□□□□ 0.03
TCF4-248ENST00000616053 GBP2P32456 591 aaPredicted RBP15.22■□□□□ 0.03
TCF4-248ENST00000616053 TTLL5Q6EMB2 1281 aa15.22■□□□□ 0.03
TCF4-248ENST00000616053 ZCCHC6Q5VYS8 1495 aaKnown RBP15.22■□□□□ 0.03
TCF4-248ENST00000616053 TTC16Q8NEE8 873 aa15.22■□□□□ 0.03
TCF4-248ENST00000616053 NLRP2Q9NX02 1062 aa15.22■□□□□ 0.03
TCF4-248ENST00000616053 MAGEC2Q9UBF1 373 aaPredicted RBP15.22■□□□□ 0.03
TCF4-248ENST00000616053 TBC1D2BQ9UPU7 963 aa15.22■□□□□ 0.03
TCF4-248ENST00000616053 VTI1AQ96AJ9 217 aa15.21■□□□□ 0.03
TCF4-248ENST00000616053 TXLNAP40222 546 aa15.21■□□□□ 0.03
TCF4-248ENST00000616053 LRSAM1Q6UWE0 723 aa15.21■□□□□ 0.03
TCF4-248ENST00000616053 CLUAP1Q96AJ1 413 aa15.21■□□□□ 0.03
TCF4-248ENST00000616053 RIC3Q7Z5B4 369 aa15.21■□□□□ 0.02
TCF4-248ENST00000616053 STRN4Q9NRL3 753 aa15.21■□□□□ 0.02
TCF4-248ENST00000616053 KTN1Q86UP2 1357 aaKnown RBP15.2■□□□□ 0.02
TCF4-248ENST00000616053 KIF3BO15066 747 aa15.2■□□□□ 0.02
TCF4-248ENST00000616053 UQCRHP07919 91 aa15.2■□□□□ 0.02
TCF4-248ENST00000616053 PPP4R3AQ6IN85 833 aa15.2■□□□□ 0.02
TCF4-248ENST00000616053 OLFM4Q6UX06 510 aa15.2■□□□□ 0.02
TCF4-248ENST00000616053 CCDC112Q8NEF3 446 aa15.2■□□□□ 0.02
TCF4-248ENST00000616053 DDX23Q9BUQ8 820 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 190 ms