RNA–Protein interactions for RNA: ENST00000615575.4

FAM228B-210, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene FAM228B, Length 1,357 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-210ENST00000615575 LRP6O75581 1613 aa28.5■■■□□ 2.15
FAM228B-210ENST00000615575 CHIC2Q9UKJ5 165 aa28.49■■■□□ 2.15
FAM228B-210ENST00000615575 BCANQ96GW7 911 aa28.48■■■□□ 2.15
FAM228B-210ENST00000615575 SLAIN2Q9P270 581 aa28.48■■■□□ 2.15
FAM228B-210ENST00000615575 CHD2O14647 1828 aaKnown RBP28.47■■■□□ 2.15
FAM228B-210ENST00000615575 GCC2Q8IWJ2 1684 aa28.46■■■□□ 2.15
FAM228B-210ENST00000615575 ZFYVE9O95405 1425 aa28.46■■■□□ 2.15
FAM228B-210ENST00000615575 FGD6Q6ZV73 1430 aa28.44■■■□□ 2.14
FAM228B-210ENST00000615575 LOC105371045A0A1W2PR82 267 aa28.44■■■□□ 2.14
FAM228B-210ENST00000615575 ANKRD30AQ9BXX3 1397 aa28.43■■■□□ 2.14
FAM228B-210ENST00000615575 PLEKHG1Q9ULL1 1385 aa28.41■■■□□ 2.14
FAM228B-210ENST00000615575 RIMS2Q9UQ26 1411 aa28.39■■■□□ 2.14
FAM228B-210ENST00000615575 SLC52A1Q9NWF4 448 aa28.37■■■□□ 2.13
FAM228B-210ENST00000615575 TMEM131LA2VDJ0 1609 aa28.37■■■□□ 2.13
FAM228B-210ENST00000615575 TRIM52Q96A61 297 aa28.36■■■□□ 2.13
FAM228B-210ENST00000615575 SHPRHQ149N8 1683 aa28.35■■■□□ 2.13
FAM228B-210ENST00000615575 AHDC1Q5TGY3 1603 aaPredicted RBP28.35■■■□□ 2.13
FAM228B-210ENST00000615575 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.35■■■□□ 2.13
FAM228B-210ENST00000615575 PPP1R15AO75807 674 aaPredicted RBP28.35■■■□□ 2.13
FAM228B-210ENST00000615575 RPRD2Q5VT52 1461 aaKnown RBP28.34■■■□□ 2.13
FAM228B-210ENST00000615575 UPF1Q92900 1129 aaKnown RBP eCLIP28.34■■■□□ 2.13
FAM228B-210ENST00000615575 MEX3CQ5U5Q3 659 aaKnown RBP28.33■■■□□ 2.13
FAM228B-210ENST00000615575 ADGRL2O95490 1459 aa28.33■■■□□ 2.13
FAM228B-210ENST00000615575 SPATA31A6Q5VVP1 1343 aa28.31■■■□□ 2.12
FAM228B-210ENST00000615575 C14orf37Q86TY3 774 aa28.3■■■□□ 2.12
FAM228B-210ENST00000615575 ADAMTS13Q76LX8 1427 aa28.3■■■□□ 2.12
FAM228B-210ENST00000615575 DIP2AQ14689 1571 aa28.28■■■□□ 2.12
FAM228B-210ENST00000615575 NCOA3Q9Y6Q9 1424 aa28.28■■■□□ 2.12
FAM228B-210ENST00000615575 NUTM2DQ5VT03 806 aaPredicted RBP28.27■■■□□ 2.12
FAM228B-210ENST00000615575 ZNF772Q68DY9 489 aaPredicted RBP28.26■■■□□ 2.12
FAM228B-210ENST00000615575 ANKRD50Q9ULJ7 1429 aa28.26■■■□□ 2.11
FAM228B-210ENST00000615575 TBX22Q9Y458 520 aa28.25■■■□□ 2.11
FAM228B-210ENST00000615575 CHGAP10645 457 aaKnown RBP28.24■■■□□ 2.11
FAM228B-210ENST00000615575 E9PCH4 1651 aa28.22■■■□□ 2.11
FAM228B-210ENST00000615575 CADPS2Q86UW7 1296 aa28.22■■■□□ 2.11
FAM228B-210ENST00000615575 UNC13BO14795 1591 aa28.2■■■□□ 2.11
FAM228B-210ENST00000615575 PTPRUQ92729 1446 aa28.2■■■□□ 2.1
FAM228B-210ENST00000615575 NUTM2BA6NNL0 878 aaPredicted RBP28.2■■■□□ 2.1
FAM228B-210ENST00000615575 NUTM2EB1AL46 878 aaPredicted RBP28.2■■■□□ 2.1
FAM228B-210ENST00000615575 ATF3P18847 181 aa28.2■■■□□ 2.1
FAM228B-210ENST00000615575 APLP2Q06481 763 aa28.2■■■□□ 2.1
FAM228B-210ENST00000615575 NUTM2AQ8IVF1 878 aaPredicted RBP28.2■■■□□ 2.1
FAM228B-210ENST00000615575 BRINP3Q76B58 766 aa28.19■■■□□ 2.1
FAM228B-210ENST00000615575 C19orf44Q9H6X5 657 aa28.19■■■□□ 2.1
FAM228B-210ENST00000615575 HDGFP51858 240 aaKnown RBP28.18■■■□□ 2.1
FAM228B-210ENST00000615575 TRPM2O94759 1503 aa28.17■■■□□ 2.1
FAM228B-210ENST00000615575 RXRBP28702 533 aa28.17■■■□□ 2.1
FAM228B-210ENST00000615575 ASXL1Q8IXJ9 1541 aa28.17■■■□□ 2.1
FAM228B-210ENST00000615575 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.16■■■□□ 2.1
FAM228B-210ENST00000615575 FAM50AQ14320 339 aaKnown RBP28.15■■■□□ 2.1
FAM228B-210ENST00000615575 PIK3R4Q99570 1358 aa28.15■■■□□ 2.1
FAM228B-210ENST00000615575 CDK12Q9NYV4 1490 aaPredicted RBP28.15■■■□□ 2.1
FAM228B-210ENST00000615575 AFF2P51816 1311 aa28.14■■■□□ 2.1
FAM228B-210ENST00000615575 NHSL1Q5SYE7 1610 aa28.13■■■□□ 2.09
FAM228B-210ENST00000615575 XRN1Q8IZH2 1706 aaKnown RBP28.12■■■□□ 2.09
FAM228B-210ENST00000615575 AMOTL2Q9Y2J4 779 aa28.11■■■□□ 2.09
FAM228B-210ENST00000615575 NRXN3Q9Y4C0 1643 aa28.11■■■□□ 2.09
FAM228B-210ENST00000615575 RGS12O14924 1447 aa28.1■■■□□ 2.09
FAM228B-210ENST00000615575 DCCP43146 1447 aa28.08■■■□□ 2.09
FAM228B-210ENST00000615575 MST1RQ04912 1400 aa28.08■■■□□ 2.09
FAM228B-210ENST00000615575 IQGAP3Q86VI3 1631 aa28.08■■■□□ 2.09
FAM228B-210ENST00000615575 SETD5Q9C0A6 1442 aa28.08■■■□□ 2.09
FAM228B-210ENST00000615575 DDX17Q92841 729 aaKnown RBP28.03■■■□□ 2.08
FAM228B-210ENST00000615575 SETBP1Q9Y6X0 1596 aa28.01■■■□□ 2.08
FAM228B-210ENST00000615575 C8orf37Q96NL8 207 aa28.01■■■□□ 2.07
FAM228B-210ENST00000615575 SRCAPQ6ZRS2 3230 aa28.01■■■□□ 2.07
FAM228B-210ENST00000615575 PNPLA6Q8IY17 1366 aa28■■■□□ 2.07
FAM228B-210ENST00000615575 NALCNQ8IZF0 1738 aa28■■■□□ 2.07
FAM228B-210ENST00000615575 METP08581 1390 aa27.96■■■□□ 2.07
FAM228B-210ENST00000615575 ADGRL3Q9HAR2 1447 aa27.95■■■□□ 2.07
FAM228B-210ENST00000615575 QTRT2Q9H974 415 aaKnown RBP27.95■■■□□ 2.06
FAM228B-210ENST00000615575 RBM6P78332 1123 aaKnown RBP27.94■■■□□ 2.06
FAM228B-210ENST00000615575 LRRC59Q96AG4 307 aaKnown RBP27.94■■■□□ 2.06
FAM228B-210ENST00000615575 SPHKAPQ2M3C7 1700 aa27.93■■■□□ 2.06
FAM228B-210ENST00000615575 NUP155O75694 1391 aa27.93■■■□□ 2.06
FAM228B-210ENST00000615575 ROCK1Q13464 1354 aa27.89■■■□□ 2.06
FAM228B-210ENST00000615575 ADAMTS2O95450 1211 aa27.89■■■□□ 2.06
FAM228B-210ENST00000615575 ZNF326Q5BKZ1 582 aaKnown RBP27.86■■■□□ 2.05
FAM228B-210ENST00000615575 NEXMIFQ5QGS0 1516 aa27.86■■■□□ 2.05
FAM228B-210ENST00000615575 C1orf167Q5SNV9 1468 aa27.85■■■□□ 2.05
FAM228B-210ENST00000615575 NGLY1Q96IV0 654 aa27.85■■■□□ 2.05
FAM228B-210ENST00000615575 LAMC1P11047 1609 aa27.84■■■□□ 2.05
FAM228B-210ENST00000615575 CLTCL1P53675 1640 aa27.83■■■□□ 2.05
FAM228B-210ENST00000615575 ATAD2Q6PL18 1390 aa27.82■■■□□ 2.04
FAM228B-210ENST00000615575 EP400Q96L91 3159 aa27.78■■■□□ 2.04
FAM228B-210ENST00000615575 ITGAEP38570 1179 aa27.77■■■□□ 2.04
FAM228B-210ENST00000615575 ORAI2Q96SN7 254 aa27.76■■■□□ 2.03
FAM228B-210ENST00000615575 USP21Q9UK80 565 aa27.76■■■□□ 2.03
FAM228B-210ENST00000615575 SOS2Q07890 1332 aaPredicted RBP27.75■■■□□ 2.03
FAM228B-210ENST00000615575 ATRNO75882 1429 aa27.74■■■□□ 2.03
FAM228B-210ENST00000615575 PTCH1Q13635 1447 aa27.74■■■□□ 2.03
FAM228B-210ENST00000615575 ROBO2Q9HCK4 1378 aa27.74■■■□□ 2.03
FAM228B-210ENST00000615575 COL22A1Q8NFW1 1626 aaPredicted RBP27.73■■■□□ 2.03
FAM228B-210ENST00000615575 TRPC5Q9UL62 973 aaPredicted RBP27.72■■■□□ 2.03
FAM228B-210ENST00000615575 KIF1BO60333 1816 aa27.69■■■□□ 2.02
FAM228B-210ENST00000615575 FNBP4Q8N3X1 1017 aaPredicted RBP27.69■■■□□ 2.02
FAM228B-210ENST00000615575 MYOM2P54296 1465 aa27.69■■■□□ 2.02
FAM228B-210ENST00000615575 ZRANB1Q9UGI0 708 aa27.66■■■□□ 2.02
FAM228B-210ENST00000615575 MARF1Q9Y4F3 1742 aaKnown RBP27.65■■■□□ 2.02
FAM228B-210ENST00000615575 BCL9LQ86UU0 1499 aa27.64■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms