RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 CFAP70Q5T0N1 1121 aa26.23■■□□□ 1.79
MMP28-204ENST00000615136 MRS2Q9HD23 443 aa26.23■■□□□ 1.79
MMP28-204ENST00000615136 SYNMO15061 1565 aa26.23■■□□□ 1.79
MMP28-204ENST00000615136 KIAA1210Q9ULL0 1709 aa26.21■■□□□ 1.79
MMP28-204ENST00000615136 ZC3H13Q5T200 1668 aaKnown RBP26.21■■□□□ 1.79
MMP28-204ENST00000615136 SCAF11Q99590 1463 aaKnown RBP26.21■■□□□ 1.79
MMP28-204ENST00000615136 NRXN1Q9ULB1 1477 aa26.2■■□□□ 1.78
MMP28-204ENST00000615136 PIK3C2BO00750 1634 aa26.18■■□□□ 1.78
MMP28-204ENST00000615136 HNRNPUQ00839 825 aaKnown RBP eCLIP26.17■■□□□ 1.78
MMP28-204ENST00000615136 ARHGAP31Q2M1Z3 1444 aa26.17■■□□□ 1.78
MMP28-204ENST00000615136 PPLO60437 1756 aa26.17■■□□□ 1.78
MMP28-204ENST00000615136 FAM9BQ8IZU0 186 aa26.17■■□□□ 1.78
MMP28-204ENST00000615136 TMF1P82094 1093 aa26.16■■□□□ 1.78
MMP28-204ENST00000615136 FKBP8Q14318 412 aa26.14■■□□□ 1.78
MMP28-204ENST00000615136 PER1O15534 1290 aaPredicted RBP26.12■■□□□ 1.77
MMP28-204ENST00000615136 NEFLP07196 543 aa26.1■■□□□ 1.77
MMP28-204ENST00000615136 REREQ9P2R6 1566 aa26.1■■□□□ 1.77
MMP28-204ENST00000615136 PREX1Q8TCU6 1659 aa26.1■■□□□ 1.77
MMP28-204ENST00000615136 IDI1Q13907 227 aa26.1■■□□□ 1.77
MMP28-204ENST00000615136 PIK3C2GO75747 1445 aa26.09■■□□□ 1.77
MMP28-204ENST00000615136 NUTM2DQ5VT03 806 aaPredicted RBP26.09■■□□□ 1.77
MMP28-204ENST00000615136 FBXO31Q5XUX0 539 aaPredicted RBP26.08■■□□□ 1.77
MMP28-204ENST00000615136 PANK3Q9H999 370 aa26.07■■□□□ 1.76
MMP28-204ENST00000615136 AGLP35573 1532 aa26.07■■□□□ 1.76
MMP28-204ENST00000615136 NEXMIFQ5QGS0 1516 aa26.05■■□□□ 1.76
MMP28-204ENST00000615136 MYO5BQ9ULV0 1848 aa26.05■■□□□ 1.76
MMP28-204ENST00000615136 RPGRIP1LQ68CZ1 1315 aa26.04■■□□□ 1.76
MMP28-204ENST00000615136 EIF3AQ14152 1382 aaKnown RBP26.04■■□□□ 1.76
MMP28-204ENST00000615136 C14orf93Q9H972 538 aaKnown RBP26.03■■□□□ 1.76
MMP28-204ENST00000615136 ARHGEF40Q8TER5 1519 aa26.02■■□□□ 1.76
MMP28-204ENST00000615136 SETBP1Q9Y6X0 1596 aa26.02■■□□□ 1.76
MMP28-204ENST00000615136 MLECQ14165 292 aa26.02■■□□□ 1.76
MMP28-204ENST00000615136 ADGRB1O14514 1584 aa26.02■■□□□ 1.76
MMP28-204ENST00000615136 CLTCQ00610 1675 aaKnown RBP26.01■■□□□ 1.76
MMP28-204ENST00000615136 PARD3Q8TEW0 1356 aa26■■□□□ 1.75
MMP28-204ENST00000615136 RALBP1Q15311 655 aa26■■□□□ 1.75
MMP28-204ENST00000615136 TMEM132EQ6IEE7 984 aa26■■□□□ 1.75
MMP28-204ENST00000615136 BCANQ96GW7 911 aa26■■□□□ 1.75
MMP28-204ENST00000615136 SLC52A1Q9NWF4 448 aa26■■□□□ 1.75
MMP28-204ENST00000615136 MYBBP1AQ9BQG0 1328 aaKnown RBP25.99■■□□□ 1.75
MMP28-204ENST00000615136 MYOM1P52179 1685 aa25.99■■□□□ 1.75
MMP28-204ENST00000615136 TMEM131LA2VDJ0 1609 aa25.99■■□□□ 1.75
MMP28-204ENST00000615136 KTN1Q86UP2 1357 aaKnown RBP25.99■■□□□ 1.75
MMP28-204ENST00000615136 ERVK-7P63135 1459 aa25.98■■□□□ 1.75
MMP28-204ENST00000615136 CC2D1BQ5T0F9 858 aaKnown RBP25.98■■□□□ 1.75
MMP28-204ENST00000615136 MYO3AQ8NEV4 1616 aa25.97■■□□□ 1.75
MMP28-204ENST00000615136 PNISRQ8TF01 805 aaKnown RBP25.97■■□□□ 1.75
MMP28-204ENST00000615136 SENP3Q9H4L4 574 aaPredicted RBP25.97■■□□□ 1.75
MMP28-204ENST00000615136 TMC1Q8TDI8 760 aa25.96■■□□□ 1.75
MMP28-204ENST00000615136 TRAK1Q9UPV9 953 aa25.96■■□□□ 1.75
MMP28-204ENST00000615136 ZBED9Q6R2W3 1325 aa25.95■■□□□ 1.74
MMP28-204ENST00000615136 KDM5AP29375 1690 aaKnown RBP25.94■■□□□ 1.74
MMP28-204ENST00000615136 TSHZ2Q9NRE2 1034 aa25.93■■□□□ 1.74
MMP28-204ENST00000615136 BRD4O60885 1362 aaPredicted RBP25.93■■□□□ 1.74
MMP28-204ENST00000615136 VGFO15240 615 aaPredicted RBP25.93■■□□□ 1.74
MMP28-204ENST00000615136 CDCA8Q53HL2 280 aa25.92■■□□□ 1.74
MMP28-204ENST00000615136 PPP6R1Q9UPN7 881 aa25.91■■□□□ 1.74
MMP28-204ENST00000615136 CENPJQ9HC77 1338 aaPredicted RBP25.9■■□□□ 1.74
MMP28-204ENST00000615136 SENP3-EIF4A1A0A087X0R7 540 aa25.9■■□□□ 1.74
MMP28-204ENST00000615136 QRICH2Q9H0J4 1663 aa25.88■■□□□ 1.73
MMP28-204ENST00000615136 SBNO2Q9Y2G9 1366 aa25.88■■□□□ 1.73
MMP28-204ENST00000615136 ZFYVE9O95405 1425 aa25.87■■□□□ 1.73
MMP28-204ENST00000615136 NLRP13Q86W25 1043 aa25.87■■□□□ 1.73
MMP28-204ENST00000615136 SPATA31D1Q6ZQQ2 1576 aa25.86■■□□□ 1.73
MMP28-204ENST00000615136 LRPPRCP42704 1394 aaKnown RBP25.86■■□□□ 1.73
MMP28-204ENST00000615136 ASXL1Q8IXJ9 1541 aa25.86■■□□□ 1.73
MMP28-204ENST00000615136 TRHP20396 242 aaPredicted RBP25.85■■□□□ 1.73
MMP28-204ENST00000615136 AMER1Q5JTC6 1135 aaPredicted RBP25.85■■□□□ 1.73
MMP28-204ENST00000615136 KNSTRNQ9Y448 316 aa25.83■■□□□ 1.73
MMP28-204ENST00000615136 ARHGEF28Q8N1W1 1705 aaKnown RBP25.83■■□□□ 1.73
MMP28-204ENST00000615136 A2ML1A8K2U0 1454 aa25.79■■□□□ 1.72
MMP28-204ENST00000615136 SLC24A1O60721 1099 aa25.79■■□□□ 1.72
MMP28-204ENST00000615136 STAG3Q9UJ98 1225 aa25.79■■□□□ 1.72
MMP28-204ENST00000615136 ZMYM3Q14202 1370 aa25.79■■□□□ 1.72
MMP28-204ENST00000615136 ERICH6BQ5W0A0 696 aa25.78■■□□□ 1.72
MMP28-204ENST00000615136 CARD14Q9BXL6 1004 aa25.78■■□□□ 1.72
MMP28-204ENST00000615136 STK26Q9P289 416 aa25.76■■□□□ 1.72
MMP28-204ENST00000615136 TULP4Q9NRJ4 1543 aa25.74■■□□□ 1.71
MMP28-204ENST00000615136 SAFB2Q14151 953 aaKnown RBP eCLIP25.74■■□□□ 1.71
MMP28-204ENST00000615136 ESF1Q9H501 851 aaKnown RBP25.73■■□□□ 1.71
MMP28-204ENST00000615136 ALKQ9UM73 1620 aa25.73■■□□□ 1.71
MMP28-204ENST00000615136 PPP2R1AP30153 589 aa25.73■■□□□ 1.71
MMP28-204ENST00000615136 SMG6Q86US8 1419 aaKnown RBP25.72■■□□□ 1.71
MMP28-204ENST00000615136 SLC12A5Q9H2X9 1139 aa25.71■■□□□ 1.71
MMP28-204ENST00000615136 RIMS2Q9UQ26 1411 aa25.7■■□□□ 1.7
MMP28-204ENST00000615136 NPC1L1Q9UHC9 1359 aa25.69■■□□□ 1.7
MMP28-204ENST00000615136 PTPRMP28827 1452 aa25.69■■□□□ 1.7
MMP28-204ENST00000615136 YTHDC2Q9H6S0 1430 aaKnown RBP25.68■■□□□ 1.7
MMP28-204ENST00000615136 IRX6P78412 446 aaPredicted RBP25.67■■□□□ 1.7
MMP28-204ENST00000615136 CABP2Q9NPB3 220 aa25.64■■□□□ 1.7
MMP28-204ENST00000615136 EVC2Q86UK5 1308 aa25.64■■□□□ 1.7
MMP28-204ENST00000615136 PRAM1Q96QH2 718 aa25.64■■□□□ 1.69
MMP28-204ENST00000615136 SETD1AO15047 1707 aaKnown RBP25.64■■□□□ 1.69
MMP28-204ENST00000615136 NSD3Q9BZ95 1437 aa25.63■■□□□ 1.69
MMP28-204ENST00000615136 TNRQ92752 1358 aa25.62■■□□□ 1.69
MMP28-204ENST00000615136 SALL2Q9Y467 1007 aaPredicted RBP25.62■■□□□ 1.69
MMP28-204ENST00000615136 NRXN3Q9Y4C0 1643 aa25.61■■□□□ 1.69
MMP28-204ENST00000615136 PPP4R2Q9NY27 417 aa25.6■■□□□ 1.69
MMP28-204ENST00000615136 NUDCQ9Y266 331 aa25.6■■□□□ 1.69
MMP28-204ENST00000615136 BLMP54132 1417 aaPredicted RBP25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms