RNA–Protein interactions for RNA: ENST00000614256.4

CHTOP-207, Transcript of chromatin target of PRMT1, humanhuman

TSL 3 BASIC

Gene CHTOP, Length 1,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-207ENST00000614256 KDM4FA0A1W2PPD8 638 aa26.74■■□□□ 1.87
CHTOP-207ENST00000614256 STAG3Q9UJ98 1225 aa26.73■■□□□ 1.87
CHTOP-207ENST00000614256 RPGRIP1LQ68CZ1 1315 aa26.71■■□□□ 1.87
CHTOP-207ENST00000614256 ADGRF5Q8IZF2 1346 aa26.7■■□□□ 1.87
CHTOP-207ENST00000614256 NUTM2DQ5VT03 806 aaPredicted RBP26.69■■□□□ 1.86
CHTOP-207ENST00000614256 NRXN1Q9ULB1 1477 aa26.69■■□□□ 1.86
CHTOP-207ENST00000614256 ZNF142P52746 1687 aaPredicted RBP26.69■■□□□ 1.86
CHTOP-207ENST00000614256 CEP170BQ9Y4F5 1589 aaPredicted RBP26.69■■□□□ 1.86
CHTOP-207ENST00000614256 RALGAPBQ86X10 1494 aa26.69■■□□□ 1.86
CHTOP-207ENST00000614256 STAC3Q96MF2 364 aa26.66■■□□□ 1.86
CHTOP-207ENST00000614256 ZFYVE9O95405 1425 aa26.65■■□□□ 1.86
CHTOP-207ENST00000614256 RIMS2Q9UQ26 1411 aa26.65■■□□□ 1.86
CHTOP-207ENST00000614256 KIAA1210Q9ULL0 1709 aa26.63■■□□□ 1.85
CHTOP-207ENST00000614256 PIK3C2GO75747 1445 aa26.62■■□□□ 1.85
CHTOP-207ENST00000614256 TMEM2Q9UHN6 1383 aa26.61■■□□□ 1.85
CHTOP-207ENST00000614256 NBPF1Q3BBV0 1214 aa26.6■■□□□ 1.85
CHTOP-207ENST00000614256 VGFO15240 615 aaPredicted RBP26.6■■□□□ 1.85
CHTOP-207ENST00000614256 SLIT1O75093 1534 aa26.58■■□□□ 1.85
CHTOP-207ENST00000614256 ROCK2O75116 1388 aaKnown RBP26.57■■□□□ 1.84
CHTOP-207ENST00000614256 ARHGAP23Q9P227 1491 aa26.57■■□□□ 1.84
CHTOP-207ENST00000614256 SENP3Q9H4L4 574 aaPredicted RBP26.57■■□□□ 1.84
CHTOP-207ENST00000614256 CFAP70Q5T0N1 1121 aa26.55■■□□□ 1.84
CHTOP-207ENST00000614256 LAMC1P11047 1609 aa26.55■■□□□ 1.84
CHTOP-207ENST00000614256 GPRASP1Q5JY77 1395 aa26.55■■□□□ 1.84
CHTOP-207ENST00000614256 NRXN3Q9Y4C0 1643 aa26.54■■□□□ 1.84
CHTOP-207ENST00000614256 THEMISQ8N1K5 641 aaPredicted RBP26.53■■□□□ 1.84
CHTOP-207ENST00000614256 IQGAP1P46940 1657 aa26.53■■□□□ 1.84
CHTOP-207ENST00000614256 CARD11Q9BXL7 1154 aa26.52■■□□□ 1.84
CHTOP-207ENST00000614256 LTKP29376 864 aa26.51■■□□□ 1.83
CHTOP-207ENST00000614256 HIRIP3Q9BW71 556 aaPredicted RBP26.51■■□□□ 1.83
CHTOP-207ENST00000614256 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.51■■□□□ 1.83
CHTOP-207ENST00000614256 SETD1AO15047 1707 aaKnown RBP26.51■■□□□ 1.83
CHTOP-207ENST00000614256 C14orf93Q9H972 538 aaKnown RBP26.5■■□□□ 1.83
CHTOP-207ENST00000614256 ALKQ9UM73 1620 aa26.49■■□□□ 1.83
CHTOP-207ENST00000614256 ADGRB1O14514 1584 aa26.49■■□□□ 1.83
CHTOP-207ENST00000614256 SETBP1Q9Y6X0 1596 aa26.49■■□□□ 1.83
CHTOP-207ENST00000614256 HSPA5P11021 654 aaKnown RBP26.48■■□□□ 1.83
CHTOP-207ENST00000614256 ASXL1Q8IXJ9 1541 aa26.47■■□□□ 1.83
CHTOP-207ENST00000614256 USP47Q96K76 1375 aa26.47■■□□□ 1.83
CHTOP-207ENST00000614256 ZNF316A6NFI3 1004 aaPredicted RBP26.46■■□□□ 1.83
CHTOP-207ENST00000614256 TXNDC2Q86VQ3 553 aa26.46■■□□□ 1.83
CHTOP-207ENST00000614256 EIF4G2P78344 907 aaKnown RBP eCLIP26.46■■□□□ 1.83
CHTOP-207ENST00000614256 HDGFP51858 240 aaKnown RBP26.45■■□□□ 1.82
CHTOP-207ENST00000614256 SCAF11Q99590 1463 aaKnown RBP26.44■■□□□ 1.82
CHTOP-207ENST00000614256 PLEKHG1Q9ULL1 1385 aa26.42■■□□□ 1.82
CHTOP-207ENST00000614256 TMEM132EQ6IEE7 984 aa26.42■■□□□ 1.82
CHTOP-207ENST00000614256 EID1Q9Y6B2 187 aa26.42■■□□□ 1.82
CHTOP-207ENST00000614256 POLR1AO95602 1720 aaPredicted RBP26.41■■□□□ 1.82
CHTOP-207ENST00000614256 ADAMTS13Q76LX8 1427 aa26.39■■□□□ 1.82
CHTOP-207ENST00000614256 LMTK3Q96Q04 1460 aa26.38■■□□□ 1.81
CHTOP-207ENST00000614256 MED14O60244 1454 aa26.35■■□□□ 1.81
CHTOP-207ENST00000614256 ARHGEF28Q8N1W1 1705 aaKnown RBP26.35■■□□□ 1.81
CHTOP-207ENST00000614256 ST20-MTHFSA0A0A6YYL1 179 aa26.35■■□□□ 1.81
CHTOP-207ENST00000614256 ANKLE2Q86XL3 938 aa26.35■■□□□ 1.81
CHTOP-207ENST00000614256 BCANQ96GW7 911 aa26.35■■□□□ 1.81
CHTOP-207ENST00000614256 METP08581 1390 aa26.33■■□□□ 1.81
CHTOP-207ENST00000614256 HSPA2P54652 639 aa26.32■■□□□ 1.8
CHTOP-207ENST00000614256 SLC26A8Q96RN1 970 aa26.31■■□□□ 1.8
CHTOP-207ENST00000614256 YTHDC2Q9H6S0 1430 aaKnown RBP26.31■■□□□ 1.8
CHTOP-207ENST00000614256 TRAK1Q9UPV9 953 aa26.3■■□□□ 1.8
CHTOP-207ENST00000614256 DIP2AQ14689 1571 aa26.29■■□□□ 1.8
CHTOP-207ENST00000614256 NCKAP5LQ9HCH0 1330 aa26.29■■□□□ 1.8
CHTOP-207ENST00000614256 STK26Q9P289 416 aa26.28■■□□□ 1.8
CHTOP-207ENST00000614256 C11orf95C9JLR9 678 aaPredicted RBP26.27■■□□□ 1.8
CHTOP-207ENST00000614256 NPHP4O75161 1426 aaPredicted RBP26.26■■□□□ 1.79
CHTOP-207ENST00000614256 QRICH2Q9H0J4 1663 aa26.26■■□□□ 1.79
CHTOP-207ENST00000614256 KNDC1Q76NI1 1749 aa26.26■■□□□ 1.79
CHTOP-207ENST00000614256 EIF3AQ14152 1382 aaKnown RBP26.26■■□□□ 1.79
CHTOP-207ENST00000614256 TESK2Q96S53 571 aa26.25■■□□□ 1.79
CHTOP-207ENST00000614256 STRCQ7RTU9 1775 aa26.25■■□□□ 1.79
CHTOP-207ENST00000614256 LRPPRCP42704 1394 aaKnown RBP26.24■■□□□ 1.79
CHTOP-207ENST00000614256 TBX22Q9Y458 520 aa26.23■■□□□ 1.79
CHTOP-207ENST00000614256 PTPRUQ92729 1446 aa26.23■■□□□ 1.79
CHTOP-207ENST00000614256 WASHC2AQ641Q2 1341 aa26.21■■□□□ 1.79
CHTOP-207ENST00000614256 DLC1Q96QB1 1528 aa26.2■■□□□ 1.79
CHTOP-207ENST00000614256 ABCC11Q96J66 1382 aa26.2■■□□□ 1.78
CHTOP-207ENST00000614256 CENPJQ9HC77 1338 aaPredicted RBP26.19■■□□□ 1.78
CHTOP-207ENST00000614256 CPS1P31327 1500 aa26.19■■□□□ 1.78
CHTOP-207ENST00000614256 CHD2O14647 1828 aaKnown RBP26.19■■□□□ 1.78
CHTOP-207ENST00000614256 XRN1Q8IZH2 1706 aaKnown RBP26.18■■□□□ 1.78
CHTOP-207ENST00000614256 TECPR2O15040 1411 aa26.17■■□□□ 1.78
CHTOP-207ENST00000614256 DISP3Q9P2K9 1392 aa26.17■■□□□ 1.78
CHTOP-207ENST00000614256 KIF7Q2M1P5 1343 aa26.17■■□□□ 1.78
CHTOP-207ENST00000614256 CCDC7Q96M83 1385 aa26.17■■□□□ 1.78
CHTOP-207ENST00000614256 PRAM1Q96QH2 718 aa26.15■■□□□ 1.78
CHTOP-207ENST00000614256 PLEKHH1Q9ULM0 1364 aa26.14■■□□□ 1.78
CHTOP-207ENST00000614256 SAFB2Q14151 953 aaKnown RBP eCLIP26.14■■□□□ 1.77
CHTOP-207ENST00000614256 SBNO2Q9Y2G9 1366 aa26.13■■□□□ 1.77
CHTOP-207ENST00000614256 ROBO2Q9HCK4 1378 aa26.13■■□□□ 1.77
CHTOP-207ENST00000614256 WAPLQ7Z5K2 1190 aa26.12■■□□□ 1.77
CHTOP-207ENST00000614256 PIK3R4Q99570 1358 aa26.12■■□□□ 1.77
CHTOP-207ENST00000614256 AMOTL2Q9Y2J4 779 aa26.11■■□□□ 1.77
CHTOP-207ENST00000614256 POGKQ9P215 609 aa26.09■■□□□ 1.77
CHTOP-207ENST00000614256 FAM135BQ49AJ0 1406 aa26.09■■□□□ 1.77
CHTOP-207ENST00000614256 TMF1P82094 1093 aa26.09■■□□□ 1.77
CHTOP-207ENST00000614256 TULP4Q9NRJ4 1543 aa26.09■■□□□ 1.77
CHTOP-207ENST00000614256 DDX10Q13206 875 aaKnown RBP26.07■■□□□ 1.76
CHTOP-207ENST00000614256 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.07■■□□□ 1.76
CHTOP-207ENST00000614256 SIRT1Q96EB6 747 aa26.07■■□□□ 1.76
CHTOP-207ENST00000614256 POLR3GLQ9BT43 218 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms