RNA–Protein interactions for RNA: ENST00000613642.4

CCL16-206, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 3

Gene CCL16, Length 687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-206ENST00000613642 PRSS12P56730 875 aa7.88□□□□□ -1.15
CCL16-206ENST00000613642 DHX37Q8IY37 1157 aaKnown RBP7.88□□□□□ -1.15
CCL16-206ENST00000613642 CERKQ8TCT0 537 aa7.88□□□□□ -1.15
CCL16-206ENST00000613642 FAM198AQ9UFP1 575 aa7.88□□□□□ -1.15
CCL16-206ENST00000613642 NAP1L5Q96NT1 182 aaPredicted RBP7.86□□□□□ -1.15
CCL16-206ENST00000613642 GRXCR2A6NFK2 248 aa7.85□□□□□ -1.15
CCL16-206ENST00000613642 C3orf80F5H4A9 247 aa7.85□□□□□ -1.15
CCL16-206ENST00000613642 OSBPP22059 807 aa7.85□□□□□ -1.15
CCL16-206ENST00000613642 PPP4CP60510 307 aa7.85□□□□□ -1.15
CCL16-206ENST00000613642 WDR70Q9NW82 654 aa7.85□□□□□ -1.15
CCL16-206ENST00000613642 SMAPO00193 183 aa7.84□□□□□ -1.15
CCL16-206ENST00000613642 PAXIP1Q6ZW49 1069 aaPredicted RBP7.84□□□□□ -1.15
CCL16-206ENST00000613642 SAMD7Q7Z3H4 446 aa7.84□□□□□ -1.15
CCL16-206ENST00000613642 TATDN2Q93075 761 aa7.84□□□□□ -1.15
CCL16-206ENST00000613642 CFAP44Q96MT7 982 aa7.83□□□□□ -1.16
CCL16-206ENST00000613642 TJAP1Q5JTD0 557 aa7.82□□□□□ -1.16
CCL16-206ENST00000613642 ARID3AQ99856 593 aa7.82□□□□□ -1.16
CCL16-206ENST00000613642 RBM27Q9P2N5 1060 aaKnown RBP7.82□□□□□ -1.16
CCL16-206ENST00000613642 NBPF26B4DH59 902 aa7.81□□□□□ -1.16
CCL16-206ENST00000613642 RBM10P98175 930 aaKnown RBP7.81□□□□□ -1.16
CCL16-206ENST00000613642 CDHR5Q9HBB8 845 aa7.81□□□□□ -1.16
CCL16-206ENST00000613642 PNMA3Q9UL41 463 aa7.81□□□□□ -1.16
CCL16-206ENST00000613642 TTC13Q8NBP0 860 aa7.8□□□□□ -1.16
CCL16-206ENST00000613642 A0A0U1RQG5 324 aaPredicted RBP7.78□□□□□ -1.16
CCL16-206ENST00000613642 NUDT18Q6ZVK8 323 aa7.78□□□□□ -1.16
CCL16-206ENST00000613642 CCDC136Q96JN2 1154 aa7.78□□□□□ -1.16
CCL16-206ENST00000613642 ZMYND15Q9H091 742 aa7.78□□□□□ -1.16
CCL16-206ENST00000613642 NPDC1Q9NQX5 325 aaPredicted RBP7.78□□□□□ -1.16
CCL16-206ENST00000613642 MTRQ99707 1265 aa7.77□□□□□ -1.17
CCL16-206ENST00000613642 VSIG10Q8N0Z9 540 aa7.76□□□□□ -1.17
CCL16-206ENST00000613642 IL21Q9HBE4 155 aa7.76□□□□□ -1.17
CCL16-206ENST00000613642 CCDC9Q9Y3X0 531 aaKnown RBP7.76□□□□□ -1.17
CCL16-206ENST00000613642 DEKP35659 375 aaKnown RBP7.75□□□□□ -1.17
CCL16-206ENST00000613642 HDGFP51858 240 aaKnown RBP7.75□□□□□ -1.17
CCL16-206ENST00000613642 YTHDC1Q96MU7 727 aaKnown RBP7.75□□□□□ -1.17
CCL16-206ENST00000613642 PUS7Q96PZ0 661 aaKnown RBP7.75□□□□□ -1.17
CCL16-206ENST00000613642 POLR3GLQ9BT43 218 aa7.75□□□□□ -1.17
CCL16-206ENST00000613642 APLP1P51693 650 aa7.74□□□□□ -1.17
CCL16-206ENST00000613642 PADI6Q6TGC4 694 aa7.74□□□□□ -1.17
CCL16-206ENST00000613642 Q6ZNB5 142 aa7.74□□□□□ -1.17
CCL16-206ENST00000613642 SUPT5HO00267 1087 aaKnown RBP7.73□□□□□ -1.17
CCL16-206ENST00000613642 LAPTM4AQ15012 233 aa7.73□□□□□ -1.17
CCL16-206ENST00000613642 PPP1R18Q6NYC8 613 aa7.73□□□□□ -1.17
CCL16-206ENST00000613642 ZNF516Q92618 1163 aa7.73□□□□□ -1.17
CCL16-206ENST00000613642 SWT1Q5T5J6 900 aaKnown RBP7.72□□□□□ -1.17
CCL16-206ENST00000613642 EYA1Q99502 592 aa7.72□□□□□ -1.17
CCL16-206ENST00000613642 UBTFP17480 764 aaKnown RBP7.71□□□□□ -1.18
CCL16-206ENST00000613642 NECTIN2Q92692 538 aa7.71□□□□□ -1.18
CCL16-206ENST00000613642 ARHGEF1Q92888 912 aaKnown RBP7.71□□□□□ -1.18
CCL16-206ENST00000613642 PRKD2Q9BZL6 878 aa7.71□□□□□ -1.18
CCL16-206ENST00000613642 RNF40O75150 1001 aa7.7□□□□□ -1.18
CCL16-206ENST00000613642 CLSTN1O94985 981 aa7.7□□□□□ -1.18
CCL16-206ENST00000613642 TICAM2Q86XR7 235 aa7.7□□□□□ -1.18
CCL16-206ENST00000613642 SLF2Q8IX21 1173 aa7.7□□□□□ -1.18
CCL16-206ENST00000613642 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.7□□□□□ -1.18
CCL16-206ENST00000613642 V9GY48 417 aaPredicted RBP7.7□□□□□ -1.18
CCL16-206ENST00000613642 LCE2BO14633 110 aa7.69□□□□□ -1.18
CCL16-206ENST00000613642 GFRA3O60609 400 aa7.69□□□□□ -1.18
CCL16-206ENST00000613642 MLLT3P42568 568 aaPredicted RBP7.69□□□□□ -1.18
CCL16-206ENST00000613642 TSHZ2Q9NRE2 1034 aa7.69□□□□□ -1.18
CCL16-206ENST00000613642 NCLP19338 710 aaKnown RBP7.68□□□□□ -1.18
CCL16-206ENST00000613642 TEX2Q8IWB9 1127 aa7.68□□□□□ -1.18
CCL16-206ENST00000613642 NKX2-3Q8TAU0 364 aa7.68□□□□□ -1.18
CCL16-206ENST00000613642 IPO4Q8TEX9 1081 aaKnown RBP7.67□□□□□ -1.18
CCL16-206ENST00000613642 PTGDRQ13258 359 aa7.66□□□□□ -1.18
CCL16-206ENST00000613642 NAP1L2Q9ULW6 460 aaPredicted RBP7.66□□□□□ -1.18
CCL16-206ENST00000613642 DCAF1Q9Y4B6 1507 aa7.66□□□□□ -1.18
CCL16-206ENST00000613642 COPS2P61201 443 aa7.65□□□□□ -1.18
CCL16-206ENST00000613642 TRAF7Q6Q0C0 670 aa7.65□□□□□ -1.18
CCL16-206ENST00000613642 KCNV2Q8TDN2 545 aa7.65□□□□□ -1.18
CCL16-206ENST00000613642 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.65□□□□□ -1.18
CCL16-206ENST00000613642 IGSF3O75054 1194 aa7.64□□□□□ -1.19
CCL16-206ENST00000613642 ZPR1O75312 459 aa7.64□□□□□ -1.19
CCL16-206ENST00000613642 SLC4A3P48751 1232 aa7.64□□□□□ -1.19
CCL16-206ENST00000613642 TMUB1Q9BVT8 246 aa7.64□□□□□ -1.19
CCL16-206ENST00000613642 NRG2O14511 850 aaPredicted RBP7.63□□□□□ -1.19
CCL16-206ENST00000613642 PRR14Q9BWN1 585 aa7.63□□□□□ -1.19
CCL16-206ENST00000613642 PCGF6Q9BYE7 350 aa7.63□□□□□ -1.19
CCL16-206ENST00000613642 DNAJB2P25686 324 aa7.62□□□□□ -1.19
CCL16-206ENST00000613642 GGCXP38435 758 aa7.62□□□□□ -1.19
CCL16-206ENST00000613642 ADGRG1Q9Y653 693 aa7.62□□□□□ -1.19
CCL16-206ENST00000613642 CCDC180Q9P1Z9 1646 aa7.62□□□□□ -1.19
CCL16-206ENST00000613642 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.61□□□□□ -1.19
CCL16-206ENST00000613642 TMEM134Q9H6X4 195 aa7.61□□□□□ -1.19
CCL16-206ENST00000613642 PCDHB3Q9Y5E6 796 aa7.61□□□□□ -1.19
CCL16-206ENST00000613642 ARID4BQ4LE39 1312 aaPredicted RBP7.6□□□□□ -1.19
CCL16-206ENST00000613642 RBM46Q8TBY0 533 aaKnown RBP7.6□□□□□ -1.19
CCL16-206ENST00000613642 RCCD1A6NED2 376 aa7.59□□□□□ -1.19
CCL16-206ENST00000613642 BLOC1S3Q6QNY0 202 aa7.59□□□□□ -1.19
CCL16-206ENST00000613642 PTMSP20962 102 aa7.58□□□□□ -1.2
CCL16-206ENST00000613642 PSMD1Q99460 953 aa7.58□□□□□ -1.2
CCL16-206ENST00000613642 RNF223E7ERA6 249 aa7.57□□□□□ -1.2
CCL16-206ENST00000613642 ACTN4O43707 911 aaKnown RBP7.57□□□□□ -1.2
CCL16-206ENST00000613642 SETQ01105 290 aaPredicted RBP7.57□□□□□ -1.2
CCL16-206ENST00000613642 FTSJ3Q8IY81 847 aaKnown RBP7.57□□□□□ -1.2
CCL16-206ENST00000613642 PDZRN3Q9UPQ7 1066 aa7.57□□□□□ -1.2
CCL16-206ENST00000613642 NUTM2FA1L443 756 aa7.56□□□□□ -1.2
CCL16-206ENST00000613642 PTMAP06454 111 aaKnown RBP7.56□□□□□ -1.2
CCL16-206ENST00000613642 NEFMP07197 916 aa7.56□□□□□ -1.2
CCL16-206ENST00000613642 FAM161AQ3B820 660 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms