RNA–Protein interactions for RNA: ENST00000613548.1

PCDH8-203, Transcript of protocadherin 8, humanhuman

TSL 2

Gene PCDH8, Length 744 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-203ENST00000613548 NCKAP5LQ9HCH0 1330 aa22.71■■□□□ 1.23
PCDH8-203ENST00000613548 SPATA31E1Q6ZUB1 1445 aa22.71■■□□□ 1.23
PCDH8-203ENST00000613548 SETBP1Q9Y6X0 1596 aa22.7■■□□□ 1.22
PCDH8-203ENST00000613548 ANKRD30BQ9BXX2 1392 aa22.69■■□□□ 1.22
PCDH8-203ENST00000613548 STAG3Q9UJ98 1225 aa22.69■■□□□ 1.22
PCDH8-203ENST00000613548 LTBP4Q8N2S1 1624 aa22.68■■□□□ 1.22
PCDH8-203ENST00000613548 ANKLE2Q86XL3 938 aa22.67■■□□□ 1.22
PCDH8-203ENST00000613548 NWD1Q149M9 1564 aa22.67■■□□□ 1.22
PCDH8-203ENST00000613548 CHD2O14647 1828 aaKnown RBP22.66■■□□□ 1.22
PCDH8-203ENST00000613548 LTKP29376 864 aa22.65■■□□□ 1.22
PCDH8-203ENST00000613548 DMRT2Q9Y5R5 561 aa22.64■■□□□ 1.21
PCDH8-203ENST00000613548 PLEKHG1Q9ULL1 1385 aa22.63■■□□□ 1.21
PCDH8-203ENST00000613548 DHX57Q6P158 1386 aaKnown RBP22.63■■□□□ 1.21
PCDH8-203ENST00000613548 XIRP1Q702N8 1843 aaKnown RBP22.62■■□□□ 1.21
PCDH8-203ENST00000613548 CHGAP10645 457 aaKnown RBP22.62■■□□□ 1.21
PCDH8-203ENST00000613548 LAMC1P11047 1609 aa22.6■■□□□ 1.21
PCDH8-203ENST00000613548 EID1Q9Y6B2 187 aa22.6■■□□□ 1.21
PCDH8-203ENST00000613548 XRN1Q8IZH2 1706 aaKnown RBP22.6■■□□□ 1.21
PCDH8-203ENST00000613548 TXNDC2Q86VQ3 553 aa22.59■■□□□ 1.21
PCDH8-203ENST00000613548 MYOM2P54296 1465 aa22.59■■□□□ 1.21
PCDH8-203ENST00000613548 ADAMTS13Q76LX8 1427 aa22.57■■□□□ 1.2
PCDH8-203ENST00000613548 CPS1P31327 1500 aa22.57■■□□□ 1.2
PCDH8-203ENST00000613548 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.55■■□□□ 1.2
PCDH8-203ENST00000613548 NRXN1Q9ULB1 1477 aa22.54■■□□□ 1.2
PCDH8-203ENST00000613548 KNDC1Q76NI1 1749 aa22.52■■□□□ 1.2
PCDH8-203ENST00000613548 PPP1R15AO75807 674 aaPredicted RBP22.52■■□□□ 1.2
PCDH8-203ENST00000613548 ZNF326Q5BKZ1 582 aaKnown RBP22.52■■□□□ 1.2
PCDH8-203ENST00000613548 ALKQ9UM73 1620 aa22.52■■□□□ 1.2
PCDH8-203ENST00000613548 NKTRP30414 1462 aaKnown RBP22.52■■□□□ 1.2
PCDH8-203ENST00000613548 ZNF335Q9H4Z2 1342 aaPredicted RBP22.52■■□□□ 1.2
PCDH8-203ENST00000613548 RPGRIP1LQ68CZ1 1315 aa22.51■■□□□ 1.19
PCDH8-203ENST00000613548 ASXL1Q8IXJ9 1541 aa22.51■■□□□ 1.19
PCDH8-203ENST00000613548 PIK3C2GO75747 1445 aa22.5■■□□□ 1.19
PCDH8-203ENST00000613548 IQSEC2Q5JU85 1478 aa22.5■■□□□ 1.19
PCDH8-203ENST00000613548 PCGF6Q9BYE7 350 aa22.5■■□□□ 1.19
PCDH8-203ENST00000613548 HDGFP51858 240 aaKnown RBP22.49■■□□□ 1.19
PCDH8-203ENST00000613548 KIAA1210Q9ULL0 1709 aa22.48■■□□□ 1.19
PCDH8-203ENST00000613548 NUTM2DQ5VT03 806 aaPredicted RBP22.48■■□□□ 1.19
PCDH8-203ENST00000613548 LRRC7Q96NW7 1537 aa22.44■■□□□ 1.18
PCDH8-203ENST00000613548 PIK3R4Q99570 1358 aa22.44■■□□□ 1.18
PCDH8-203ENST00000613548 PRAG1Q86YV5 1406 aa22.43■■□□□ 1.18
PCDH8-203ENST00000613548 SLC26A8Q96RN1 970 aa22.42■■□□□ 1.18
PCDH8-203ENST00000613548 NALCNQ8IZF0 1738 aa22.41■■□□□ 1.18
PCDH8-203ENST00000613548 RGL3Q3MIN7 710 aa22.41■■□□□ 1.18
PCDH8-203ENST00000613548 PTPRUQ92729 1446 aa22.4■■□□□ 1.18
PCDH8-203ENST00000613548 VGFO15240 615 aaPredicted RBP22.4■■□□□ 1.18
PCDH8-203ENST00000613548 ADGRF5Q8IZF2 1346 aa22.39■■□□□ 1.18
PCDH8-203ENST00000613548 TBX22Q9Y458 520 aa22.39■■□□□ 1.17
PCDH8-203ENST00000613548 SENP3Q9H4L4 574 aaPredicted RBP22.38■■□□□ 1.17
PCDH8-203ENST00000613548 TRPM1Q7Z4N2 1603 aa22.38■■□□□ 1.17
PCDH8-203ENST00000613548 ADGRB1O14514 1584 aa22.38■■□□□ 1.17
PCDH8-203ENST00000613548 METP08581 1390 aa22.38■■□□□ 1.17
PCDH8-203ENST00000613548 ARHGEF28Q8N1W1 1705 aaKnown RBP22.35■■□□□ 1.17
PCDH8-203ENST00000613548 PTCH1Q13635 1447 aa22.35■■□□□ 1.17
PCDH8-203ENST00000613548 BCANQ96GW7 911 aa22.35■■□□□ 1.17
PCDH8-203ENST00000613548 CERKQ8TCT0 537 aa22.33■■□□□ 1.17
PCDH8-203ENST00000613548 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.32■■□□□ 1.16
PCDH8-203ENST00000613548 KCNA6P17658 529 aa22.32■■□□□ 1.16
PCDH8-203ENST00000613548 TECPR2O15040 1411 aa22.31■■□□□ 1.16
PCDH8-203ENST00000613548 SIN3AQ96ST3 1273 aa22.3■■□□□ 1.16
PCDH8-203ENST00000613548 DLC1Q96QB1 1528 aa22.27■■□□□ 1.16
PCDH8-203ENST00000613548 STAC3Q96MF2 364 aa22.27■■□□□ 1.16
PCDH8-203ENST00000613548 TMEM94Q12767 1356 aa22.26■■□□□ 1.15
PCDH8-203ENST00000613548 DCAF11Q8TEB1 546 aa22.26■■□□□ 1.15
PCDH8-203ENST00000613548 CLSPNQ9HAW4 1339 aa22.26■■□□□ 1.15
PCDH8-203ENST00000613548 YTHDC2Q9H6S0 1430 aaKnown RBP22.24■■□□□ 1.15
PCDH8-203ENST00000613548 NCOA3Q9Y6Q9 1424 aa22.24■■□□□ 1.15
PCDH8-203ENST00000613548 CDC42BPGQ6DT37 1551 aa22.24■■□□□ 1.15
PCDH8-203ENST00000613548 LRPPRCP42704 1394 aaKnown RBP22.24■■□□□ 1.15
PCDH8-203ENST00000613548 C14orf93Q9H972 538 aaKnown RBP22.22■■□□□ 1.15
PCDH8-203ENST00000613548 ROBO2Q9HCK4 1378 aa22.22■■□□□ 1.15
PCDH8-203ENST00000613548 ADGRL3Q9HAR2 1447 aa22.22■■□□□ 1.15
PCDH8-203ENST00000613548 ADGRB2O60241 1585 aa22.21■■□□□ 1.15
PCDH8-203ENST00000613548 AMOTL2Q9Y2J4 779 aa22.21■■□□□ 1.15
PCDH8-203ENST00000613548 TONSLQ96HA7 1378 aa22.21■■□□□ 1.15
PCDH8-203ENST00000613548 NEUROD1Q13562 356 aa22.2■■□□□ 1.14
PCDH8-203ENST00000613548 L3MBTL2Q969R5 705 aa22.2■■□□□ 1.14
PCDH8-203ENST00000613548 DCCP43146 1447 aa22.2■■□□□ 1.14
PCDH8-203ENST00000613548 FMN2Q9NZ56 1722 aa22.2■■□□□ 1.14
PCDH8-203ENST00000613548 KDM2AQ9Y2K7 1162 aa22.19■■□□□ 1.14
PCDH8-203ENST00000613548 QRICH2Q9H0J4 1663 aa22.18■■□□□ 1.14
PCDH8-203ENST00000613548 RALGAPBQ86X10 1494 aa22.18■■□□□ 1.14
PCDH8-203ENST00000613548 ABCC11Q96J66 1382 aa22.18■■□□□ 1.14
PCDH8-203ENST00000613548 CFAP70Q5T0N1 1121 aa22.18■■□□□ 1.14
PCDH8-203ENST00000613548 ROBO1Q9Y6N7 1651 aa22.17■■□□□ 1.14
PCDH8-203ENST00000613548 FAM135BQ49AJ0 1406 aa22.17■■□□□ 1.14
PCDH8-203ENST00000613548 PROSER2Q86WR7 435 aaPredicted RBP22.16■■□□□ 1.14
PCDH8-203ENST00000613548 MSH6P52701 1360 aa22.15■■□□□ 1.14
PCDH8-203ENST00000613548 TMEM132EQ6IEE7 984 aa22.13■■□□□ 1.13
PCDH8-203ENST00000613548 RGPD8O14715 1765 aaPredicted RBP22.12■■□□□ 1.13
PCDH8-203ENST00000613548 FBXO41Q8TF61 875 aa22.12■■□□□ 1.13
PCDH8-203ENST00000613548 RBM33Q96EV2 1170 aaKnown RBP22.12■■□□□ 1.13
PCDH8-203ENST00000613548 NHSL1Q5SYE7 1610 aa22.1■■□□□ 1.13
PCDH8-203ENST00000613548 PLEKHH1Q9ULM0 1364 aa22.1■■□□□ 1.13
PCDH8-203ENST00000613548 GPRASP1Q5JY77 1395 aa22.09■■□□□ 1.13
PCDH8-203ENST00000613548 ITSN1Q15811 1721 aa22.09■■□□□ 1.13
PCDH8-203ENST00000613548 CCER1Q8TC90 406 aaPredicted RBP22.08■■□□□ 1.13
PCDH8-203ENST00000613548 USP32Q8NFA0 1604 aa22.08■■□□□ 1.13
PCDH8-203ENST00000613548 MST1RQ04912 1400 aa22.06■■□□□ 1.12
PCDH8-203ENST00000613548 UBAP1LF5GYI3 381 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms