RNA–Protein interactions for RNA: ENST00000613452.1

LINC01138-204, Transcript of long intergenic non-protein coding RNA 1138, humanhuman

TSL 1 (best)

Gene LINC01138, Length 1,050 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01138-204ENST00000613452 STRCP1A6NGW2 1772 aa14.64□□□□□ -0.07
LINC01138-204ENST00000613452 ALKQ9UM73 1620 aa14.63□□□□□ -0.07
LINC01138-204ENST00000613452 TMEM94Q12767 1356 aa14.63□□□□□ -0.07
LINC01138-204ENST00000613452 PPP1R15AO75807 674 aaPredicted RBP14.63□□□□□ -0.07
LINC01138-204ENST00000613452 ITGAEP38570 1179 aa14.63□□□□□ -0.07
LINC01138-204ENST00000613452 ADGRB3O60242 1522 aa14.62□□□□□ -0.07
LINC01138-204ENST00000613452 ZFYVE9O95405 1425 aa14.62□□□□□ -0.07
LINC01138-204ENST00000613452 RIMS2Q9UQ26 1411 aa14.61□□□□□ -0.07
LINC01138-204ENST00000613452 NCOA3Q9Y6Q9 1424 aa14.61□□□□□ -0.07
LINC01138-204ENST00000613452 CHGAP10645 457 aaKnown RBP14.61□□□□□ -0.07
LINC01138-204ENST00000613452 PPARGC1BQ86YN6 1023 aaKnown RBP14.6□□□□□ -0.07
LINC01138-204ENST00000613452 UNC13BO14795 1591 aa14.6□□□□□ -0.07
LINC01138-204ENST00000613452 PIK3R4Q99570 1358 aa14.59□□□□□ -0.07
LINC01138-204ENST00000613452 SLAIN2Q9P270 581 aa14.58□□□□□ -0.08
LINC01138-204ENST00000613452 NKTRP30414 1462 aaKnown RBP14.57□□□□□ -0.08
LINC01138-204ENST00000613452 TMEM131LA2VDJ0 1609 aa14.56□□□□□ -0.08
LINC01138-204ENST00000613452 GCC2Q8IWJ2 1684 aa14.56□□□□□ -0.08
LINC01138-204ENST00000613452 MSH6P52701 1360 aa14.56□□□□□ -0.08
LINC01138-204ENST00000613452 RRBP1Q9P2E9 1410 aaKnown RBP14.56□□□□□ -0.08
LINC01138-204ENST00000613452 IQGAP3Q86VI3 1631 aa14.55□□□□□ -0.08
LINC01138-204ENST00000613452 C19orf44Q9H6X5 657 aa14.55□□□□□ -0.08
LINC01138-204ENST00000613452 RBM33Q96EV2 1170 aaKnown RBP14.54□□□□□ -0.08
LINC01138-204ENST00000613452 MED1Q15648 1581 aaPredicted RBP14.53□□□□□ -0.08
LINC01138-204ENST00000613452 CADPS2Q86UW7 1296 aa14.53□□□□□ -0.08
LINC01138-204ENST00000613452 E9PCH4 1651 aa14.52□□□□□ -0.08
LINC01138-204ENST00000613452 NWD1Q149M9 1564 aa14.52□□□□□ -0.08
LINC01138-204ENST00000613452 ADAMTS13Q76LX8 1427 aa14.52□□□□□ -0.08
LINC01138-204ENST00000613452 NUTM2DQ5VT03 806 aaPredicted RBP14.52□□□□□ -0.09
LINC01138-204ENST00000613452 AMOTL2Q9Y2J4 779 aa14.52□□□□□ -0.09
LINC01138-204ENST00000613452 XIRP1Q702N8 1843 aaKnown RBP14.51□□□□□ -0.09
LINC01138-204ENST00000613452 ATF3P18847 181 aa14.5□□□□□ -0.09
LINC01138-204ENST00000613452 ZNF326Q5BKZ1 582 aaKnown RBP14.5□□□□□ -0.09
LINC01138-204ENST00000613452 NAIPQ13075 1403 aa14.49□□□□□ -0.09
LINC01138-204ENST00000613452 CHD2O14647 1828 aaKnown RBP14.49□□□□□ -0.09
LINC01138-204ENST00000613452 VGFO15240 615 aaPredicted RBP14.48□□□□□ -0.09
LINC01138-204ENST00000613452 C14orf37Q86TY3 774 aa14.48□□□□□ -0.09
LINC01138-204ENST00000613452 DIP2AQ14689 1571 aa14.47□□□□□ -0.09
LINC01138-204ENST00000613452 RPGRIP1LQ68CZ1 1315 aa14.47□□□□□ -0.09
LINC01138-204ENST00000613452 ACIN1Q9UKV3 1341 aaKnown RBP14.47□□□□□ -0.09
LINC01138-204ENST00000613452 TRIM52Q96A61 297 aa14.47□□□□□ -0.09
LINC01138-204ENST00000613452 RGS17Q9UGC6 210 aaPredicted RBP14.47□□□□□ -0.09
LINC01138-204ENST00000613452 HFM1A2PYH4 1435 aa14.45□□□□□ -0.1
LINC01138-204ENST00000613452 SLC4A1APQ9BWU0 796 aaKnown RBP14.45□□□□□ -0.1
LINC01138-204ENST00000613452 MYO5BQ9ULV0 1848 aa14.45□□□□□ -0.1
LINC01138-204ENST00000613452 JCADQ9P266 1359 aa14.45□□□□□ -0.1
LINC01138-204ENST00000613452 TRPM2O94759 1503 aa14.44□□□□□ -0.1
LINC01138-204ENST00000613452 PTPRUQ92729 1446 aa14.43□□□□□ -0.1
LINC01138-204ENST00000613452 ROBO1Q9Y6N7 1651 aa14.42□□□□□ -0.1
LINC01138-204ENST00000613452 SPATA31A6Q5VVP1 1343 aa14.41□□□□□ -0.1
LINC01138-204ENST00000613452 METP08581 1390 aa14.41□□□□□ -0.1
LINC01138-204ENST00000613452 SETBP1Q9Y6X0 1596 aa14.41□□□□□ -0.1
LINC01138-204ENST00000613452 DCCP43146 1447 aa14.41□□□□□ -0.1
LINC01138-204ENST00000613452 BRINP3Q76B58 766 aa14.39□□□□□ -0.11
LINC01138-204ENST00000613452 SPHKAPQ2M3C7 1700 aa14.38□□□□□ -0.11
LINC01138-204ENST00000613452 POTEAQ6S8J7 498 aa14.38□□□□□ -0.11
LINC01138-204ENST00000613452 LRRC59Q96AG4 307 aaKnown RBP14.37□□□□□ -0.11
LINC01138-204ENST00000613452 MPHOSPH9Q99550 1183 aa14.36□□□□□ -0.11
LINC01138-204ENST00000613452 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.35□□□□□ -0.11
LINC01138-204ENST00000613452 NEXMIFQ5QGS0 1516 aa14.35□□□□□ -0.11
LINC01138-204ENST00000613452 ZNF772Q68DY9 489 aaPredicted RBP14.34□□□□□ -0.11
LINC01138-204ENST00000613452 CLTCL1P53675 1640 aa14.33□□□□□ -0.11
LINC01138-204ENST00000613452 NRXN3Q9Y4C0 1643 aa14.33□□□□□ -0.11
LINC01138-204ENST00000613452 PHLPP1O60346 1717 aa14.32□□□□□ -0.12
LINC01138-204ENST00000613452 AHDC1Q5TGY3 1603 aaPredicted RBP14.32□□□□□ -0.12
LINC01138-204ENST00000613452 MST1RQ04912 1400 aa14.32□□□□□ -0.12
LINC01138-204ENST00000613452 SETD5Q9C0A6 1442 aa14.32□□□□□ -0.12
LINC01138-204ENST00000613452 ADGRL3Q9HAR2 1447 aa14.32□□□□□ -0.12
LINC01138-204ENST00000613452 ADRA2BP18089 450 aa14.31□□□□□ -0.12
LINC01138-204ENST00000613452 XRN1Q8IZH2 1706 aaKnown RBP14.31□□□□□ -0.12
LINC01138-204ENST00000613452 PRAG1Q86YV5 1406 aa14.31□□□□□ -0.12
LINC01138-204ENST00000613452 KIF1BO60333 1816 aa14.3□□□□□ -0.12
LINC01138-204ENST00000613452 MEX3CQ5U5Q3 659 aaKnown RBP14.3□□□□□ -0.12
LINC01138-204ENST00000613452 SIRT1Q96EB6 747 aa14.3□□□□□ -0.12
LINC01138-204ENST00000613452 ANKRD30BQ9BXX2 1392 aa14.3□□□□□ -0.12
LINC01138-204ENST00000613452 PTCH1Q13635 1447 aa14.3□□□□□ -0.12
LINC01138-204ENST00000613452 COL16A1Q07092 1604 aaPredicted RBP14.3□□□□□ -0.12
LINC01138-204ENST00000613452 CCDC144AA2RUR9 1427 aa14.29□□□□□ -0.12
LINC01138-204ENST00000613452 RGL3Q3MIN7 710 aa14.28□□□□□ -0.12
LINC01138-204ENST00000613452 ROBO2Q9HCK4 1378 aa14.28□□□□□ -0.12
LINC01138-204ENST00000613452 ADGRF5Q8IZF2 1346 aa14.27□□□□□ -0.12
LINC01138-204ENST00000613452 C1orf167Q5SNV9 1468 aa14.26□□□□□ -0.13
LINC01138-204ENST00000613452 SPATA31E1Q6ZUB1 1445 aa14.26□□□□□ -0.13
LINC01138-204ENST00000613452 HRCP23327 699 aa14.26□□□□□ -0.13
LINC01138-204ENST00000613452 ASXL1Q8IXJ9 1541 aa14.25□□□□□ -0.13
LINC01138-204ENST00000613452 ABCC11Q96J66 1382 aa14.25□□□□□ -0.13
LINC01138-204ENST00000613452 SOS2Q07890 1332 aaPredicted RBP14.25□□□□□ -0.13
LINC01138-204ENST00000613452 RXRBP28702 533 aa14.25□□□□□ -0.13
LINC01138-204ENST00000613452 NUTM2BA6NNL0 878 aaPredicted RBP14.24□□□□□ -0.13
LINC01138-204ENST00000613452 NUTM2EB1AL46 878 aaPredicted RBP14.24□□□□□ -0.13
LINC01138-204ENST00000613452 NUTM2AQ8IVF1 878 aaPredicted RBP14.24□□□□□ -0.13
LINC01138-204ENST00000613452 ORAI2Q96SN7 254 aa14.24□□□□□ -0.13
LINC01138-204ENST00000613452 C14orf93Q9H972 538 aaKnown RBP14.24□□□□□ -0.13
LINC01138-204ENST00000613452 STAC3Q96MF2 364 aa14.23□□□□□ -0.13
LINC01138-204ENST00000613452 SHPRHQ149N8 1683 aa14.23□□□□□ -0.13
LINC01138-204ENST00000613452 LRP6O75581 1613 aa14.23□□□□□ -0.13
LINC01138-204ENST00000613452 LRPPRCP42704 1394 aaKnown RBP14.22□□□□□ -0.13
LINC01138-204ENST00000613452 DDX17Q92841 729 aaKnown RBP14.22□□□□□ -0.13
LINC01138-204ENST00000613452 TECPR2O15040 1411 aa14.21□□□□□ -0.13
LINC01138-204ENST00000613452 PNPLA6Q8IY17 1366 aa14.21□□□□□ -0.14
LINC01138-204ENST00000613452 ESCO1Q5FWF5 840 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms