RNA–Protein interactions for RNA: ENST00000613104.1

ATF3-210, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best) BASIC

Gene ATF3, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-210ENST00000613104 CLSPNQ9HAW4 1339 aa13.6□□□□□ -0.23
ATF3-210ENST00000613104 ADGRB3O60242 1522 aa13.59□□□□□ -0.23
ATF3-210ENST00000613104 MYO5BQ9ULV0 1848 aa13.58□□□□□ -0.24
ATF3-210ENST00000613104 SLC4A2P04920 1241 aa13.58□□□□□ -0.24
ATF3-210ENST00000613104 LMTK3Q96Q04 1460 aa13.57□□□□□ -0.24
ATF3-210ENST00000613104 SPATA31E1Q6ZUB1 1445 aa13.56□□□□□ -0.24
ATF3-210ENST00000613104 CCER1Q8TC90 406 aaPredicted RBP13.56□□□□□ -0.24
ATF3-210ENST00000613104 SIN3AQ96ST3 1273 aa13.55□□□□□ -0.24
ATF3-210ENST00000613104 SLIT1O75093 1534 aa13.54□□□□□ -0.24
ATF3-210ENST00000613104 THEMISQ8N1K5 641 aaPredicted RBP13.53□□□□□ -0.24
ATF3-210ENST00000613104 STAG3Q9UJ98 1225 aa13.53□□□□□ -0.24
ATF3-210ENST00000613104 ARHGAP23Q9P227 1491 aa13.53□□□□□ -0.24
ATF3-210ENST00000613104 CHGAP10645 457 aaKnown RBP13.52□□□□□ -0.25
ATF3-210ENST00000613104 PPLO60437 1756 aa13.51□□□□□ -0.25
ATF3-210ENST00000613104 IFT172Q9UG01 1749 aa13.51□□□□□ -0.25
ATF3-210ENST00000613104 NEXMIFQ5QGS0 1516 aa13.51□□□□□ -0.25
ATF3-210ENST00000613104 ZFYVE9O95405 1425 aa13.51□□□□□ -0.25
ATF3-210ENST00000613104 TMEM2Q9UHN6 1383 aa13.51□□□□□ -0.25
ATF3-210ENST00000613104 RPGRIP1LQ68CZ1 1315 aa13.5□□□□□ -0.25
ATF3-210ENST00000613104 NEUROD1Q13562 356 aa13.5□□□□□ -0.25
ATF3-210ENST00000613104 RIMS2Q9UQ26 1411 aa13.49□□□□□ -0.25
ATF3-210ENST00000613104 MYCNP04198 464 aaPredicted RBP13.48□□□□□ -0.25
ATF3-210ENST00000613104 RGL3Q3MIN7 710 aa13.48□□□□□ -0.25
ATF3-210ENST00000613104 ZNF326Q5BKZ1 582 aaKnown RBP13.48□□□□□ -0.25
ATF3-210ENST00000613104 POLR1AO95602 1720 aaPredicted RBP13.47□□□□□ -0.25
ATF3-210ENST00000613104 HSPA2P54652 639 aa13.47□□□□□ -0.25
ATF3-210ENST00000613104 HDGFP51858 240 aaKnown RBP13.46□□□□□ -0.25
ATF3-210ENST00000613104 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.46□□□□□ -0.25
ATF3-210ENST00000613104 MYOM2P54296 1465 aa13.46□□□□□ -0.25
ATF3-210ENST00000613104 SCAF11Q99590 1463 aaKnown RBP13.46□□□□□ -0.25
ATF3-210ENST00000613104 STRCQ7RTU9 1775 aa13.45□□□□□ -0.26
ATF3-210ENST00000613104 LTKP29376 864 aa13.45□□□□□ -0.26
ATF3-210ENST00000613104 TXNDC2Q86VQ3 553 aa13.45□□□□□ -0.26
ATF3-210ENST00000613104 L3MBTL2Q969R5 705 aa13.45□□□□□ -0.26
ATF3-210ENST00000613104 STAC3Q96MF2 364 aa13.45□□□□□ -0.26
ATF3-210ENST00000613104 TIMELESSQ9UNS1 1208 aa13.45□□□□□ -0.26
ATF3-210ENST00000613104 TONSLQ96HA7 1378 aa13.45□□□□□ -0.26
ATF3-210ENST00000613104 MED14O60244 1454 aa13.44□□□□□ -0.26
ATF3-210ENST00000613104 NRXN1Q9ULB1 1477 aa13.44□□□□□ -0.26
ATF3-210ENST00000613104 ANKLE2Q86XL3 938 aa13.44□□□□□ -0.26
ATF3-210ENST00000613104 EID1Q9Y6B2 187 aa13.44□□□□□ -0.26
ATF3-210ENST00000613104 VGFO15240 615 aaPredicted RBP13.43□□□□□ -0.26
ATF3-210ENST00000613104 DCAF11Q8TEB1 546 aa13.43□□□□□ -0.26
ATF3-210ENST00000613104 PLEKHG1Q9ULL1 1385 aa13.43□□□□□ -0.26
ATF3-210ENST00000613104 ADGRF5Q8IZF2 1346 aa13.41□□□□□ -0.26
ATF3-210ENST00000613104 NCKAP5LQ9HCH0 1330 aa13.41□□□□□ -0.26
ATF3-210ENST00000613104 SOCS7O14512 581 aa13.41□□□□□ -0.26
ATF3-210ENST00000613104 NUTM2DQ5VT03 806 aaPredicted RBP13.41□□□□□ -0.26
ATF3-210ENST00000613104 NRXN3Q9Y4C0 1643 aa13.41□□□□□ -0.26
ATF3-210ENST00000613104 DISP3Q9P2K9 1392 aa13.41□□□□□ -0.26
ATF3-210ENST00000613104 SETBP1Q9Y6X0 1596 aa13.41□□□□□ -0.26
ATF3-210ENST00000613104 IQGAP1P46940 1657 aa13.4□□□□□ -0.26
ATF3-210ENST00000613104 NPHP4O75161 1426 aaPredicted RBP13.4□□□□□ -0.26
ATF3-210ENST00000613104 PPP1R15AO75807 674 aaPredicted RBP13.4□□□□□ -0.26
ATF3-210ENST00000613104 PIK3C2GO75747 1445 aa13.39□□□□□ -0.27
ATF3-210ENST00000613104 KDM2AQ9Y2K7 1162 aa13.39□□□□□ -0.27
ATF3-210ENST00000613104 PRAG1Q86YV5 1406 aa13.39□□□□□ -0.27
ATF3-210ENST00000613104 SETD1AO15047 1707 aaKnown RBP13.38□□□□□ -0.27
ATF3-210ENST00000613104 ADAMTS13Q76LX8 1427 aa13.38□□□□□ -0.27
ATF3-210ENST00000613104 DIP2AQ14689 1571 aa13.37□□□□□ -0.27
ATF3-210ENST00000613104 KIAA1210Q9ULL0 1709 aa13.36□□□□□ -0.27
ATF3-210ENST00000613104 LAMC1P11047 1609 aa13.36□□□□□ -0.27
ATF3-210ENST00000613104 ALKQ9UM73 1620 aa13.36□□□□□ -0.27
ATF3-210ENST00000613104 NBPF8Q3BBV2 869 aa13.35□□□□□ -0.27
ATF3-210ENST00000613104 C14orf93Q9H972 538 aaKnown RBP13.35□□□□□ -0.27
ATF3-210ENST00000613104 TBX22Q9Y458 520 aa13.35□□□□□ -0.27
ATF3-210ENST00000613104 CERKQ8TCT0 537 aa13.34□□□□□ -0.27
ATF3-210ENST00000613104 TRPM1Q7Z4N2 1603 aa13.34□□□□□ -0.27
ATF3-210ENST00000613104 ATXN8OSP0DMR3 200 aa13.32□□□□□ -0.28
ATF3-210ENST00000613104 CFAP70Q5T0N1 1121 aa13.32□□□□□ -0.28
ATF3-210ENST00000613104 BCANQ96GW7 911 aa13.32□□□□□ -0.28
ATF3-210ENST00000613104 SLC26A8Q96RN1 970 aa13.32□□□□□ -0.28
ATF3-210ENST00000613104 ASXL1Q8IXJ9 1541 aa13.32□□□□□ -0.28
ATF3-210ENST00000613104 PIK3R4Q99570 1358 aa13.32□□□□□ -0.28
ATF3-210ENST00000613104 ADGRB1O14514 1584 aa13.31□□□□□ -0.28
ATF3-210ENST00000613104 METP08581 1390 aa13.31□□□□□ -0.28
ATF3-210ENST00000613104 RALGAPBQ86X10 1494 aa13.3□□□□□ -0.28
ATF3-210ENST00000613104 CHD2O14647 1828 aaKnown RBP13.3□□□□□ -0.28
ATF3-210ENST00000613104 PTPRUQ92729 1446 aa13.29□□□□□ -0.28
ATF3-210ENST00000613104 NWD1Q149M9 1564 aa13.28□□□□□ -0.28
ATF3-210ENST00000613104 ZEB1P37275 1124 aaPredicted RBP13.28□□□□□ -0.28
ATF3-210ENST00000613104 GPRASP1Q5JY77 1395 aa13.28□□□□□ -0.28
ATF3-210ENST00000613104 KNDC1Q76NI1 1749 aa13.27□□□□□ -0.28
ATF3-210ENST00000613104 XRN1Q8IZH2 1706 aaKnown RBP13.27□□□□□ -0.28
ATF3-210ENST00000613104 NBPF1Q3BBV0 1214 aa13.27□□□□□ -0.29
ATF3-210ENST00000613104 STRCP1A6NGW2 1772 aa13.27□□□□□ -0.29
ATF3-210ENST00000613104 KCNA6P17658 529 aa13.26□□□□□ -0.29
ATF3-210ENST00000613104 LRPPRCP42704 1394 aaKnown RBP13.26□□□□□ -0.29
ATF3-210ENST00000613104 TMEM132EQ6IEE7 984 aa13.26□□□□□ -0.29
ATF3-210ENST00000613104 YTHDC2Q9H6S0 1430 aaKnown RBP13.26□□□□□ -0.29
ATF3-210ENST00000613104 TECPR2O15040 1411 aa13.25□□□□□ -0.29
ATF3-210ENST00000613104 ROCK2O75116 1388 aaKnown RBP13.25□□□□□ -0.29
ATF3-210ENST00000613104 ABCC11Q96J66 1382 aa13.25□□□□□ -0.29
ATF3-210ENST00000613104 ILDR2Q71H61 639 aa13.25□□□□□ -0.29
ATF3-210ENST00000613104 DLC1Q96QB1 1528 aa13.24□□□□□ -0.29
ATF3-210ENST00000613104 AMOTL2Q9Y2J4 779 aa13.24□□□□□ -0.29
ATF3-210ENST00000613104 CPS1P31327 1500 aa13.23□□□□□ -0.29
ATF3-210ENST00000613104 NKTRP30414 1462 aaKnown RBP13.23□□□□□ -0.29
ATF3-210ENST00000613104 PTCH1Q13635 1447 aa13.22□□□□□ -0.29
ATF3-210ENST00000613104 ARHGEF28Q8N1W1 1705 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms