RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 TMCO4Q5TGY1 634 aa13.23□□□□□ -0.29
CNTNAP3B-211ENST00000612828 RTF1Q92541 710 aaKnown RBP13.23□□□□□ -0.29
CNTNAP3B-211ENST00000612828 CUX2O14529 1486 aa13.23□□□□□ -0.29
CNTNAP3B-211ENST00000612828 FYB1O15117 783 aa13.23□□□□□ -0.29
CNTNAP3B-211ENST00000612828 MNS1Q8NEH6 495 aa13.23□□□□□ -0.29
CNTNAP3B-211ENST00000612828 DIAPH3Q9NSV4 1193 aa13.23□□□□□ -0.29
CNTNAP3B-211ENST00000612828 VGFO15240 615 aaPredicted RBP13.22□□□□□ -0.29
CNTNAP3B-211ENST00000612828 FOSBP53539 338 aa13.22□□□□□ -0.29
CNTNAP3B-211ENST00000612828 CCDC173Q0VFZ6 552 aa13.21□□□□□ -0.29
CNTNAP3B-211ENST00000612828 COMMD10Q9Y6G5 202 aa13.21□□□□□ -0.29
CNTNAP3B-211ENST00000612828 L3MBTL2Q969R5 705 aa13.21□□□□□ -0.29
CNTNAP3B-211ENST00000612828 MAPK8IP2Q13387 824 aaPredicted RBP13.21□□□□□ -0.29
CNTNAP3B-211ENST00000612828 HOMER2Q9NSB8 354 aa13.21□□□□□ -0.29
CNTNAP3B-211ENST00000612828 H3BQV1 296 aa13.21□□□□□ -0.29
CNTNAP3B-211ENST00000612828 IFFO2Q5TF58 517 aa13.21□□□□□ -0.29
CNTNAP3B-211ENST00000612828 MCTP1Q6DN14 999 aa13.21□□□□□ -0.29
CNTNAP3B-211ENST00000612828 MATR3P43243 847 aaKnown RBP eCLIP13.21□□□□□ -0.3
CNTNAP3B-211ENST00000612828 TSPYL1Q9H0U9 437 aa13.2□□□□□ -0.3
CNTNAP3B-211ENST00000612828 HSP90AB4PQ58FF6 505 aa13.2□□□□□ -0.3
CNTNAP3B-211ENST00000612828 IPO7O95373 1038 aaKnown RBP13.2□□□□□ -0.3
CNTNAP3B-211ENST00000612828 AMOTL1Q8IY63 956 aa13.2□□□□□ -0.3
CNTNAP3B-211ENST00000612828 SRPK2P78362 688 aaKnown RBP13.19□□□□□ -0.3
CNTNAP3B-211ENST00000612828 VPS37DQ86XT2 251 aa13.19□□□□□ -0.3
CNTNAP3B-211ENST00000612828 RAPGEF2Q9Y4G8 1499 aa13.19□□□□□ -0.3
CNTNAP3B-211ENST00000612828 GOLGA6L10A0A0M3HER8 536 aa13.19□□□□□ -0.3
CNTNAP3B-211ENST00000612828 GOLGA6L10A6NI86 522 aa13.19□□□□□ -0.3
CNTNAP3B-211ENST00000612828 GOLGA6L19H0YKK7 550 aa13.19□□□□□ -0.3
CNTNAP3B-211ENST00000612828 DNAJC2Q99543 621 aaKnown RBP13.19□□□□□ -0.3
CNTNAP3B-211ENST00000612828 SYTL4Q96C24 671 aaPredicted RBP13.18□□□□□ -0.3
CNTNAP3B-211ENST00000612828 TAX1BP1Q86VP1 789 aa13.18□□□□□ -0.3
CNTNAP3B-211ENST00000612828 NGEFQ8N5V2 710 aa13.18□□□□□ -0.3
CNTNAP3B-211ENST00000612828 PKD2Q13563 968 aa13.18□□□□□ -0.3
CNTNAP3B-211ENST00000612828 SAFB2Q14151 953 aaKnown RBP eCLIP13.17□□□□□ -0.3
CNTNAP3B-211ENST00000612828 MPHOSPH9Q99550 1183 aa13.17□□□□□ -0.3
CNTNAP3B-211ENST00000612828 CDR1P51861 262 aa13.17□□□□□ -0.3
CNTNAP3B-211ENST00000612828 MRPS9P82933 396 aaKnown RBP13.17□□□□□ -0.3
CNTNAP3B-211ENST00000612828 DCTN1Q14203 1278 aa13.17□□□□□ -0.3
CNTNAP3B-211ENST00000612828 CAGE1Q8TC20 777 aa13.16□□□□□ -0.3
CNTNAP3B-211ENST00000612828 OFD1O75665 1012 aa13.16□□□□□ -0.3
CNTNAP3B-211ENST00000612828 MRVI1Q9Y6F6 885 aa13.16□□□□□ -0.3
CNTNAP3B-211ENST00000612828 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.14□□□□□ -0.31
CNTNAP3B-211ENST00000612828 NACADO15069 1562 aa13.14□□□□□ -0.31
CNTNAP3B-211ENST00000612828 GRM1Q13255 1194 aa13.14□□□□□ -0.31
CNTNAP3B-211ENST00000612828 FHAD1B1AJZ9 1412 aa13.14□□□□□ -0.31
CNTNAP3B-211ENST00000612828 GPATCH3Q96I76 525 aa13.14□□□□□ -0.31
CNTNAP3B-211ENST00000612828 CENPHQ9H3R5 247 aa13.13□□□□□ -0.31
CNTNAP3B-211ENST00000612828 EZRP15311 586 aaKnown RBP13.13□□□□□ -0.31
CNTNAP3B-211ENST00000612828 SYCP1Q15431 976 aa13.13□□□□□ -0.31
CNTNAP3B-211ENST00000612828 TAF3Q5VWG9 929 aa13.13□□□□□ -0.31
CNTNAP3B-211ENST00000612828 RCAN3Q9UKA8 241 aa13.13□□□□□ -0.31
CNTNAP3B-211ENST00000612828 SYAP1Q96A49 352 aaPredicted RBP13.13□□□□□ -0.31
CNTNAP3B-211ENST00000612828 KCNA4P22459 653 aa13.12□□□□□ -0.31
CNTNAP3B-211ENST00000612828 SMC1AQ14683 1233 aaKnown RBP13.12□□□□□ -0.31
CNTNAP3B-211ENST00000612828 RBM28Q9NW13 759 aaKnown RBP13.12□□□□□ -0.31
CNTNAP3B-211ENST00000612828 RALBP1Q15311 655 aa13.12□□□□□ -0.31
CNTNAP3B-211ENST00000612828 DRC1Q96MC2 740 aa13.12□□□□□ -0.31
CNTNAP3B-211ENST00000612828 TNNT1P13805 278 aa13.12□□□□□ -0.31
CNTNAP3B-211ENST00000612828 EVA1CP58658 441 aa13.12□□□□□ -0.31
CNTNAP3B-211ENST00000612828 ANKRD18AQ8IVF6 992 aa13.12□□□□□ -0.31
CNTNAP3B-211ENST00000612828 SLKQ9H2G2 1235 aaPredicted RBP13.11□□□□□ -0.31
CNTNAP3B-211ENST00000612828 FAM184AQ8NB25 1140 aa13.11□□□□□ -0.31
CNTNAP3B-211ENST00000612828 TTC36A6NLP5 189 aa13.11□□□□□ -0.31
CNTNAP3B-211ENST00000612828 RFX1P22670 979 aa13.11□□□□□ -0.31
CNTNAP3B-211ENST00000612828 RGS22Q8NE09 1264 aa13.11□□□□□ -0.31
CNTNAP3B-211ENST00000612828 ARHGAP35Q9NRY4 1499 aa13.1□□□□□ -0.31
CNTNAP3B-211ENST00000612828 NUDCQ9Y266 331 aa13.1□□□□□ -0.31
CNTNAP3B-211ENST00000612828 TCHPQ9BT92 498 aa13.1□□□□□ -0.31
CNTNAP3B-211ENST00000612828 GBP2P32456 591 aaPredicted RBP13.1□□□□□ -0.31
CNTNAP3B-211ENST00000612828 TIGD1Q96MW7 591 aa13.09□□□□□ -0.31
CNTNAP3B-211ENST00000612828 FHOD3Q2V2M9 1422 aa13.09□□□□□ -0.31
CNTNAP3B-211ENST00000612828 CCDC47Q96A33 483 aaKnown RBP13.09□□□□□ -0.31
CNTNAP3B-211ENST00000612828 SSR1P43307 286 aaKnown RBP13.09□□□□□ -0.31
CNTNAP3B-211ENST00000612828 SLC4A10Q6U841 1118 aa13.09□□□□□ -0.31
CNTNAP3B-211ENST00000612828 BECN2A8MW95 431 aa13.08□□□□□ -0.31
CNTNAP3B-211ENST00000612828 PPP4R4Q6NUP7 873 aa13.08□□□□□ -0.31
CNTNAP3B-211ENST00000612828 ARGLU1Q9NWB6 273 aaPredicted RBP13.08□□□□□ -0.31
CNTNAP3B-211ENST00000612828 TDRD9Q8NDG6 1382 aaKnown RBP13.08□□□□□ -0.32
CNTNAP3B-211ENST00000612828 SPATA24Q86W54 205 aa13.08□□□□□ -0.32
CNTNAP3B-211ENST00000612828 ATP2B2Q01814 1243 aa13.08□□□□□ -0.32
CNTNAP3B-211ENST00000612828 TICAM2Q86XR7 235 aa13.08□□□□□ -0.32
CNTNAP3B-211ENST00000612828 SYNE3Q6ZMZ3 975 aa13.08□□□□□ -0.32
CNTNAP3B-211ENST00000612828 WIZO95785 1651 aa13.08□□□□□ -0.32
CNTNAP3B-211ENST00000612828 TMCO5BA8MYB1 307 aa13.08□□□□□ -0.32
CNTNAP3B-211ENST00000612828 ANAPC15P60006 121 aa13.08□□□□□ -0.32
CNTNAP3B-211ENST00000612828 PRKRIP1Q9H875 184 aaPredicted RBP13.08□□□□□ -0.32
CNTNAP3B-211ENST00000612828 PLIN1O60240 522 aa13.07□□□□□ -0.32
CNTNAP3B-211ENST00000612828 GNL1P36915 607 aaPredicted RBP13.07□□□□□ -0.32
CNTNAP3B-211ENST00000612828 NOP2P46087 812 aaKnown RBP13.07□□□□□ -0.32
CNTNAP3B-211ENST00000612828 GIMAP7Q8NHV1 300 aa13.07□□□□□ -0.32
CNTNAP3B-211ENST00000612828 ARL1P40616 181 aaPredicted RBP13.07□□□□□ -0.32
CNTNAP3B-211ENST00000612828 MPHOSPH10O00566 681 aaKnown RBP13.07□□□□□ -0.32
CNTNAP3B-211ENST00000612828 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.07□□□□□ -0.32
CNTNAP3B-211ENST00000612828 ANKRD20A12PQ8NF67 263 aa13.06□□□□□ -0.32
CNTNAP3B-211ENST00000612828 BMS1Q14692 1282 aaKnown RBP13.06□□□□□ -0.32
CNTNAP3B-211ENST00000612828 PPM1EQ8WY54 764 aa13.06□□□□□ -0.32
CNTNAP3B-211ENST00000612828 CFAP57Q96MR6 1250 aa13.06□□□□□ -0.32
CNTNAP3B-211ENST00000612828 LTV1Q96GA3 475 aaPredicted RBP13.06□□□□□ -0.32
CNTNAP3B-211ENST00000612828 TMF1P82094 1093 aa13.06□□□□□ -0.32
CNTNAP3B-211ENST00000612828 SH3BP5O60239 455 aa13.05□□□□□ -0.32
CNTNAP3B-211ENST00000612828 EXOC6Q8TAG9 804 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms