RNA–Protein interactions for RNA: ENST00000612548.4

CIT-219, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 1 (best) BASIC

Gene CIT, Length 1,799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-219ENST00000612548 ADGRF5Q8IZF2 1346 aa20.86■□□□□ 0.93
CIT-219ENST00000612548 PLPPR3Q6T4P5 718 aa20.86■□□□□ 0.93
CIT-219ENST00000612548 ADAMTSL3P82987 1691 aa20.86■□□□□ 0.93
CIT-219ENST00000612548 USP47Q96K76 1375 aa20.85■□□□□ 0.93
CIT-219ENST00000612548 STAG3Q9UJ98 1225 aa20.85■□□□□ 0.93
CIT-219ENST00000612548 NBPF1Q3BBV0 1214 aa20.85■□□□□ 0.93
CIT-219ENST00000612548 NRXN1Q9ULB1 1477 aa20.84■□□□□ 0.93
CIT-219ENST00000612548 LAMC1P11047 1609 aa20.83■□□□□ 0.93
CIT-219ENST00000612548 GPRASP1Q5JY77 1395 aa20.83■□□□□ 0.92
CIT-219ENST00000612548 KIAA1210Q9ULL0 1709 aa20.82■□□□□ 0.92
CIT-219ENST00000612548 A2ML1A8K2U0 1454 aa20.82■□□□□ 0.92
CIT-219ENST00000612548 NUTM2DQ5VT03 806 aaPredicted RBP20.81■□□□□ 0.92
CIT-219ENST00000612548 DIEXFQ68CQ4 756 aaKnown RBP20.81■□□□□ 0.92
CIT-219ENST00000612548 PIK3C2GO75747 1445 aa20.79■□□□□ 0.92
CIT-219ENST00000612548 NLRP1Q9C000 1473 aa20.78■□□□□ 0.92
CIT-219ENST00000612548 UBR1Q8IWV7 1749 aa20.77■□□□□ 0.92
CIT-219ENST00000612548 KDM5AP29375 1690 aaKnown RBP20.77■□□□□ 0.91
CIT-219ENST00000612548 VGFO15240 615 aaPredicted RBP20.77■□□□□ 0.91
CIT-219ENST00000612548 CFAP70Q5T0N1 1121 aa20.77■□□□□ 0.91
CIT-219ENST00000612548 ZFYVE9O95405 1425 aa20.75■□□□□ 0.91
CIT-219ENST00000612548 MYO3AQ8NEV4 1616 aa20.74■□□□□ 0.91
CIT-219ENST00000612548 RIMS2Q9UQ26 1411 aa20.74■□□□□ 0.91
CIT-219ENST00000612548 IQGAP1P46940 1657 aa20.74■□□□□ 0.91
CIT-219ENST00000612548 ST20-MTHFSA0A0A6YYL1 179 aa20.71■□□□□ 0.91
CIT-219ENST00000612548 SETBP1Q9Y6X0 1596 aa20.71■□□□□ 0.91
CIT-219ENST00000612548 POLR1AO95602 1720 aaPredicted RBP20.71■□□□□ 0.91
CIT-219ENST00000612548 SENP3Q9H4L4 574 aaPredicted RBP20.7■□□□□ 0.9
CIT-219ENST00000612548 C14orf93Q9H972 538 aaKnown RBP20.7■□□□□ 0.9
CIT-219ENST00000612548 SCAF11Q99590 1463 aaKnown RBP20.7■□□□□ 0.9
CIT-219ENST00000612548 WASHC2AQ641Q2 1341 aa20.69■□□□□ 0.9
CIT-219ENST00000612548 C11orf95C9JLR9 678 aaPredicted RBP20.68■□□□□ 0.9
CIT-219ENST00000612548 ADGRB1O14514 1584 aa20.68■□□□□ 0.9
CIT-219ENST00000612548 TMEM2Q9UHN6 1383 aa20.67■□□□□ 0.9
CIT-219ENST00000612548 DDX10Q13206 875 aaKnown RBP20.67■□□□□ 0.9
CIT-219ENST00000612548 CCDC7Q96M83 1385 aa20.66■□□□□ 0.9
CIT-219ENST00000612548 PTPRMP28827 1452 aa20.66■□□□□ 0.9
CIT-219ENST00000612548 CEP170BQ9Y4F5 1589 aaPredicted RBP20.65■□□□□ 0.9
CIT-219ENST00000612548 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.65■□□□□ 0.9
CIT-219ENST00000612548 TMEM132EQ6IEE7 984 aa20.64■□□□□ 0.89
CIT-219ENST00000612548 EIF3AQ14152 1382 aaKnown RBP20.63■□□□□ 0.89
CIT-219ENST00000612548 ALKQ9UM73 1620 aa20.63■□□□□ 0.89
CIT-219ENST00000612548 KIF7Q2M1P5 1343 aa20.63■□□□□ 0.89
CIT-219ENST00000612548 ASXL1Q8IXJ9 1541 aa20.63■□□□□ 0.89
CIT-219ENST00000612548 HDGFP51858 240 aaKnown RBP20.62■□□□□ 0.89
CIT-219ENST00000612548 ZNF142P52746 1687 aaPredicted RBP20.62■□□□□ 0.89
CIT-219ENST00000612548 SETD1BQ9UPS6 1966 aaKnown RBP20.62■□□□□ 0.89
CIT-219ENST00000612548 SLIT1O75093 1534 aa20.61■□□□□ 0.89
CIT-219ENST00000612548 NRXN3Q9Y4C0 1643 aa20.61■□□□□ 0.89
CIT-219ENST00000612548 SETD1AO15047 1707 aaKnown RBP20.59■□□□□ 0.89
CIT-219ENST00000612548 TESK2Q96S53 571 aa20.59■□□□□ 0.89
CIT-219ENST00000612548 ARHGAP23Q9P227 1491 aa20.59■□□□□ 0.89
CIT-219ENST00000612548 THEMISQ8N1K5 641 aaPredicted RBP20.59■□□□□ 0.89
CIT-219ENST00000612548 POLR3GLQ9BT43 218 aa20.59■□□□□ 0.89
CIT-219ENST00000612548 TRAK1Q9UPV9 953 aa20.58■□□□□ 0.89
CIT-219ENST00000612548 LTKP29376 864 aa20.57■□□□□ 0.88
CIT-219ENST00000612548 ARHGEF28Q8N1W1 1705 aaKnown RBP20.56■□□□□ 0.88
CIT-219ENST00000612548 TXNDC2Q86VQ3 553 aa20.56■□□□□ 0.88
CIT-219ENST00000612548 EID1Q9Y6B2 187 aa20.56■□□□□ 0.88
CIT-219ENST00000612548 DISP3Q9P2K9 1392 aa20.55■□□□□ 0.88
CIT-219ENST00000612548 BCANQ96GW7 911 aa20.54■□□□□ 0.88
CIT-219ENST00000612548 PLEKHG1Q9ULL1 1385 aa20.54■□□□□ 0.88
CIT-219ENST00000612548 YTHDC2Q9H6S0 1430 aaKnown RBP20.53■□□□□ 0.88
CIT-219ENST00000612548 QRICH2Q9H0J4 1663 aa20.53■□□□□ 0.88
CIT-219ENST00000612548 TMF1P82094 1093 aa20.53■□□□□ 0.88
CIT-219ENST00000612548 STK26Q9P289 416 aa20.53■□□□□ 0.88
CIT-219ENST00000612548 CENPJQ9HC77 1338 aaPredicted RBP20.52■□□□□ 0.88
CIT-219ENST00000612548 MIER1Q8N108 512 aa20.51■□□□□ 0.87
CIT-219ENST00000612548 ADAMTS13Q76LX8 1427 aa20.5■□□□□ 0.87
CIT-219ENST00000612548 METP08581 1390 aa20.49■□□□□ 0.87
CIT-219ENST00000612548 KDM4FA0A1W2PPD8 638 aa20.48■□□□□ 0.87
CIT-219ENST00000612548 SBNO2Q9Y2G9 1366 aa20.48■□□□□ 0.87
CIT-219ENST00000612548 LRPPRCP42704 1394 aaKnown RBP20.47■□□□□ 0.87
CIT-219ENST00000612548 MED14O60244 1454 aa20.45■□□□□ 0.86
CIT-219ENST00000612548 DLC1Q96QB1 1528 aa20.44■□□□□ 0.86
CIT-219ENST00000612548 KNDC1Q76NI1 1749 aa20.44■□□□□ 0.86
CIT-219ENST00000612548 SAFB2Q14151 953 aaKnown RBP eCLIP20.44■□□□□ 0.86
CIT-219ENST00000612548 SLC26A8Q96RN1 970 aa20.44■□□□□ 0.86
CIT-219ENST00000612548 SLC24A1O60721 1099 aa20.43■□□□□ 0.86
CIT-219ENST00000612548 ANKLE2Q86XL3 938 aa20.43■□□□□ 0.86
CIT-219ENST00000612548 PRAM1Q96QH2 718 aa20.43■□□□□ 0.86
CIT-219ENST00000612548 DIP2AQ14689 1571 aa20.43■□□□□ 0.86
CIT-219ENST00000612548 ABCC11Q96J66 1382 aa20.42■□□□□ 0.86
CIT-219ENST00000612548 CDCA8Q53HL2 280 aa20.42■□□□□ 0.86
CIT-219ENST00000612548 POGKQ9P215 609 aa20.41■□□□□ 0.86
CIT-219ENST00000612548 ANP32CO43423 234 aa20.4■□□□□ 0.86
CIT-219ENST00000612548 CPS1P31327 1500 aa20.39■□□□□ 0.86
CIT-219ENST00000612548 TULP4Q9NRJ4 1543 aa20.39■□□□□ 0.85
CIT-219ENST00000612548 TECPR2O15040 1411 aa20.39■□□□□ 0.85
CIT-219ENST00000612548 MYOM1P52179 1685 aa20.38■□□□□ 0.85
CIT-219ENST00000612548 TBX22Q9Y458 520 aa20.38■□□□□ 0.85
CIT-219ENST00000612548 PLEKHH1Q9ULM0 1364 aa20.38■□□□□ 0.85
CIT-219ENST00000612548 PTPRUQ92729 1446 aa20.37■□□□□ 0.85
CIT-219ENST00000612548 WAPLQ7Z5K2 1190 aa20.36■□□□□ 0.85
CIT-219ENST00000612548 MINK1Q8N4C8 1332 aaPredicted RBP20.36■□□□□ 0.85
CIT-219ENST00000612548 EVC2Q86UK5 1308 aa20.35■□□□□ 0.85
CIT-219ENST00000612548 FAM135BQ49AJ0 1406 aa20.34■□□□□ 0.85
CIT-219ENST00000612548 NPHP4O75161 1426 aaPredicted RBP20.34■□□□□ 0.85
CIT-219ENST00000612548 ROBO2Q9HCK4 1378 aa20.33■□□□□ 0.84
CIT-219ENST00000612548 NCKAP5LQ9HCH0 1330 aa20.32■□□□□ 0.84
CIT-219ENST00000612548 SIRT1Q96EB6 747 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms