RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 RPGRIP1LQ68CZ1 1315 aa17.27■□□□□ 0.36
CBWD1-220ENST00000612045 LAMC1P11047 1609 aa17.27■□□□□ 0.35
CBWD1-220ENST00000612045 WASHC2AQ641Q2 1341 aa17.26■□□□□ 0.35
CBWD1-220ENST00000612045 ADGRF5Q8IZF2 1346 aa17.25■□□□□ 0.35
CBWD1-220ENST00000612045 PPLO60437 1756 aa17.25■□□□□ 0.35
CBWD1-220ENST00000612045 NRXN1Q9ULB1 1477 aa17.25■□□□□ 0.35
CBWD1-220ENST00000612045 C11orf95C9JLR9 678 aaPredicted RBP17.24■□□□□ 0.35
CBWD1-220ENST00000612045 MIER1Q8N108 512 aa17.24■□□□□ 0.35
CBWD1-220ENST00000612045 TMEM131LA2VDJ0 1609 aa17.23■□□□□ 0.35
CBWD1-220ENST00000612045 KIAA1210Q9ULL0 1709 aa17.23■□□□□ 0.35
CBWD1-220ENST00000612045 ST20-MTHFSA0A0A6YYL1 179 aa17.22■□□□□ 0.35
CBWD1-220ENST00000612045 NEXMIFQ5QGS0 1516 aa17.21■□□□□ 0.35
CBWD1-220ENST00000612045 CCDC7Q96M83 1385 aa17.21■□□□□ 0.35
CBWD1-220ENST00000612045 POLR1AO95602 1720 aaPredicted RBP17.2■□□□□ 0.34
CBWD1-220ENST00000612045 MYO5BQ9ULV0 1848 aa17.2■□□□□ 0.34
CBWD1-220ENST00000612045 PIK3C2GO75747 1445 aa17.19■□□□□ 0.34
CBWD1-220ENST00000612045 KIF7Q2M1P5 1343 aa17.19■□□□□ 0.34
CBWD1-220ENST00000612045 CFAP70Q5T0N1 1121 aa17.19■□□□□ 0.34
CBWD1-220ENST00000612045 VGFO15240 615 aaPredicted RBP17.18■□□□□ 0.34
CBWD1-220ENST00000612045 STAG3Q9UJ98 1225 aa17.17■□□□□ 0.34
CBWD1-220ENST00000612045 FER1L4A9Z1Z3 1794 aa17.17■□□□□ 0.34
CBWD1-220ENST00000612045 TNRQ92752 1358 aa17.17■□□□□ 0.34
CBWD1-220ENST00000612045 ZFYVE9O95405 1425 aa17.17■□□□□ 0.34
CBWD1-220ENST00000612045 IQGAP1P46940 1657 aa17.16■□□□□ 0.34
CBWD1-220ENST00000612045 SCAF11Q99590 1463 aaKnown RBP17.16■□□□□ 0.34
CBWD1-220ENST00000612045 NUTM2DQ5VT03 806 aaPredicted RBP17.15■□□□□ 0.34
CBWD1-220ENST00000612045 A2ML1A8K2U0 1454 aa17.15■□□□□ 0.34
CBWD1-220ENST00000612045 C14orf93Q9H972 538 aaKnown RBP17.14■□□□□ 0.34
CBWD1-220ENST00000612045 SETBP1Q9Y6X0 1596 aa17.13■□□□□ 0.33
CBWD1-220ENST00000612045 CEBPAP49715 358 aaPredicted RBP17.13■□□□□ 0.33
CBWD1-220ENST00000612045 C3P01024 1663 aa17.13■□□□□ 0.33
CBWD1-220ENST00000612045 TESK2Q96S53 571 aa17.12■□□□□ 0.33
CBWD1-220ENST00000612045 EIF3AQ14152 1382 aaKnown RBP17.1■□□□□ 0.33
CBWD1-220ENST00000612045 ADGRB1O14514 1584 aa17.09■□□□□ 0.33
CBWD1-220ENST00000612045 POLR3GLQ9BT43 218 aa17.09■□□□□ 0.33
CBWD1-220ENST00000612045 KDM5AP29375 1690 aaKnown RBP17.09■□□□□ 0.33
CBWD1-220ENST00000612045 RIMS2Q9UQ26 1411 aa17.08■□□□□ 0.33
CBWD1-220ENST00000612045 NLRP1Q9C000 1473 aa17.08■□□□□ 0.32
CBWD1-220ENST00000612045 UBR1Q8IWV7 1749 aa17.06■□□□□ 0.32
CBWD1-220ENST00000612045 ANP32CO43423 234 aa17.06■□□□□ 0.32
CBWD1-220ENST00000612045 TMF1P82094 1093 aa17.06■□□□□ 0.32
CBWD1-220ENST00000612045 TMEM132EQ6IEE7 984 aa17.06■□□□□ 0.32
CBWD1-220ENST00000612045 DISP3Q9P2K9 1392 aa17.06■□□□□ 0.32
CBWD1-220ENST00000612045 PLPPR3Q6T4P5 718 aa17.05■□□□□ 0.32
CBWD1-220ENST00000612045 ADAMTSL3P82987 1691 aa17.04■□□□□ 0.32
CBWD1-220ENST00000612045 RIMS1Q86UR5 1692 aaKnown RBP17.04■□□□□ 0.32
CBWD1-220ENST00000612045 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.04■□□□□ 0.32
CBWD1-220ENST00000612045 TRAK1Q9UPV9 953 aa17.03■□□□□ 0.32
CBWD1-220ENST00000612045 MYO3AQ8NEV4 1616 aa17.02■□□□□ 0.32
CBWD1-220ENST00000612045 HDGFP51858 240 aaKnown RBP17.02■□□□□ 0.31
CBWD1-220ENST00000612045 TMEM2Q9UHN6 1383 aa17.02■□□□□ 0.31
CBWD1-220ENST00000612045 ALKQ9UM73 1620 aa17.01■□□□□ 0.31
CBWD1-220ENST00000612045 ASXL1Q8IXJ9 1541 aa17.01■□□□□ 0.31
CBWD1-220ENST00000612045 SLC24A1O60721 1099 aa17■□□□□ 0.31
CBWD1-220ENST00000612045 CENPJQ9HC77 1338 aaPredicted RBP17■□□□□ 0.31
CBWD1-220ENST00000612045 SBNO2Q9Y2G9 1366 aa16.99■□□□□ 0.31
CBWD1-220ENST00000612045 CDCA8Q53HL2 280 aa16.98■□□□□ 0.31
CBWD1-220ENST00000612045 ARHGEF28Q8N1W1 1705 aaKnown RBP16.97■□□□□ 0.31
CBWD1-220ENST00000612045 NRXN3Q9Y4C0 1643 aa16.97■□□□□ 0.31
CBWD1-220ENST00000612045 PTPRMP28827 1452 aa16.96■□□□□ 0.31
CBWD1-220ENST00000612045 YTHDC2Q9H6S0 1430 aaKnown RBP16.96■□□□□ 0.31
CBWD1-220ENST00000612045 CCER2I3L3R5 266 aa16.96■□□□□ 0.3
CBWD1-220ENST00000612045 SETD1AO15047 1707 aaKnown RBP16.95■□□□□ 0.3
CBWD1-220ENST00000612045 THEMISQ8N1K5 641 aaPredicted RBP16.95■□□□□ 0.3
CBWD1-220ENST00000612045 STK26Q9P289 416 aa16.95■□□□□ 0.3
CBWD1-220ENST00000612045 QRICH2Q9H0J4 1663 aa16.95■□□□□ 0.3
CBWD1-220ENST00000612045 SLIT1O75093 1534 aa16.94■□□□□ 0.3
CBWD1-220ENST00000612045 ARHGAP23Q9P227 1491 aa16.94■□□□□ 0.3
CBWD1-220ENST00000612045 LTKP29376 864 aa16.93■□□□□ 0.3
CBWD1-220ENST00000612045 PRKRIP1Q9H875 184 aaPredicted RBP16.93■□□□□ 0.3
CBWD1-220ENST00000612045 TXNDC2Q86VQ3 553 aa16.93■□□□□ 0.3
CBWD1-220ENST00000612045 CEP170BQ9Y4F5 1589 aaPredicted RBP16.93■□□□□ 0.3
CBWD1-220ENST00000612045 EID1Q9Y6B2 187 aa16.92■□□□□ 0.3
CBWD1-220ENST00000612045 PLEKHG1Q9ULL1 1385 aa16.91■□□□□ 0.3
CBWD1-220ENST00000612045 BCANQ96GW7 911 aa16.91■□□□□ 0.3
CBWD1-220ENST00000612045 LRPPRCP42704 1394 aaKnown RBP16.9■□□□□ 0.3
CBWD1-220ENST00000612045 SETD1BQ9UPS6 1966 aaKnown RBP16.9■□□□□ 0.3
CBWD1-220ENST00000612045 METP08581 1390 aa16.9■□□□□ 0.3
CBWD1-220ENST00000612045 YTHDC1Q96MU7 727 aaKnown RBP16.89■□□□□ 0.29
CBWD1-220ENST00000612045 PANK3Q9H999 370 aa16.89■□□□□ 0.29
CBWD1-220ENST00000612045 PER1O15534 1290 aaPredicted RBP16.89■□□□□ 0.29
CBWD1-220ENST00000612045 PRAM1Q96QH2 718 aa16.89■□□□□ 0.29
CBWD1-220ENST00000612045 ADAMTS13Q76LX8 1427 aa16.88■□□□□ 0.29
CBWD1-220ENST00000612045 ABCC11Q96J66 1382 aa16.88■□□□□ 0.29
CBWD1-220ENST00000612045 DLC1Q96QB1 1528 aa16.88■□□□□ 0.29
CBWD1-220ENST00000612045 ZNF142P52746 1687 aaPredicted RBP16.87■□□□□ 0.29
CBWD1-220ENST00000612045 SAFB2Q14151 953 aaKnown RBP eCLIP16.87■□□□□ 0.29
CBWD1-220ENST00000612045 POGKQ9P215 609 aa16.87■□□□□ 0.29
CBWD1-220ENST00000612045 MYOM1P52179 1685 aa16.87■□□□□ 0.29
CBWD1-220ENST00000612045 EVC2Q86UK5 1308 aa16.86■□□□□ 0.29
CBWD1-220ENST00000612045 TULP4Q9NRJ4 1543 aa16.85■□□□□ 0.29
CBWD1-220ENST00000612045 MED14O60244 1454 aa16.85■□□□□ 0.29
CBWD1-220ENST00000612045 PUS7Q96PZ0 661 aaKnown RBP16.84■□□□□ 0.29
CBWD1-220ENST00000612045 CNGB1Q14028 1251 aaPredicted RBP16.84■□□□□ 0.29
CBWD1-220ENST00000612045 TECPR2O15040 1411 aa16.83■□□□□ 0.29
CBWD1-220ENST00000612045 KTN1Q86UP2 1357 aaKnown RBP16.82■□□□□ 0.28
CBWD1-220ENST00000612045 KNDC1Q76NI1 1749 aa16.82■□□□□ 0.28
CBWD1-220ENST00000612045 SLC26A8Q96RN1 970 aa16.82■□□□□ 0.28
CBWD1-220ENST00000612045 MINK1Q8N4C8 1332 aaPredicted RBP16.82■□□□□ 0.28
CBWD1-220ENST00000612045 WAPLQ7Z5K2 1190 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms