RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 CDK13Q14004 1512 aaKnown RBP13.57□□□□□ -0.24
CDC42EP3-206ENST00000611976 NINLQ9Y2I6 1382 aa13.57□□□□□ -0.24
CDC42EP3-206ENST00000611976 ANKRD45Q5TZF3 282 aa13.57□□□□□ -0.24
CDC42EP3-206ENST00000611976 FOXD4L1Q9NU39 408 aa13.57□□□□□ -0.24
CDC42EP3-206ENST00000611976 ARHGAP5Q13017 1502 aa13.57□□□□□ -0.24
CDC42EP3-206ENST00000611976 PRG4Q92954 1404 aaPredicted RBP13.56□□□□□ -0.24
CDC42EP3-206ENST00000611976 MSH5O43196 834 aa13.56□□□□□ -0.24
CDC42EP3-206ENST00000611976 IQGAP2Q13576 1575 aa13.56□□□□□ -0.24
CDC42EP3-206ENST00000611976 SOX12O15370 315 aa13.56□□□□□ -0.24
CDC42EP3-206ENST00000611976 IFT140Q96RY7 1462 aa13.55□□□□□ -0.24
CDC42EP3-206ENST00000611976 KIF16BQ96L93 1317 aa13.55□□□□□ -0.24
CDC42EP3-206ENST00000611976 PLEKHG5O94827 1062 aa13.55□□□□□ -0.24
CDC42EP3-206ENST00000611976 PDE3AQ14432 1141 aa13.55□□□□□ -0.24
CDC42EP3-206ENST00000611976 ERBINQ96RT1 1412 aa13.55□□□□□ -0.24
CDC42EP3-206ENST00000611976 PHF14O94880 888 aa13.55□□□□□ -0.24
CDC42EP3-206ENST00000611976 RPRD2Q5VT52 1461 aaKnown RBP13.55□□□□□ -0.24
CDC42EP3-206ENST00000611976 MRC2Q9UBG0 1479 aa13.55□□□□□ -0.24
CDC42EP3-206ENST00000611976 PLEKHH2Q8IVE3 1493 aa13.54□□□□□ -0.24
CDC42EP3-206ENST00000611976 CSPP1Q1MSJ5 1256 aa13.54□□□□□ -0.24
CDC42EP3-206ENST00000611976 DRC7Q8IY82 874 aa13.54□□□□□ -0.24
CDC42EP3-206ENST00000611976 DDX49Q9Y6V7 483 aaKnown RBP13.54□□□□□ -0.24
CDC42EP3-206ENST00000611976 NUTM2DQ5VT03 806 aaPredicted RBP13.54□□□□□ -0.24
CDC42EP3-206ENST00000611976 PANK1Q8TE04 598 aa13.54□□□□□ -0.24
CDC42EP3-206ENST00000611976 NBPF1Q3BBV0 1214 aa13.53□□□□□ -0.24
CDC42EP3-206ENST00000611976 C11orf95C9JLR9 678 aaPredicted RBP13.53□□□□□ -0.24
CDC42EP3-206ENST00000611976 C22orf23Q9BZE7 217 aa13.53□□□□□ -0.24
CDC42EP3-206ENST00000611976 THOC2Q8NI27 1593 aaKnown RBP13.53□□□□□ -0.24
CDC42EP3-206ENST00000611976 TRIM6-TRIM34B2RNG4 842 aa13.52□□□□□ -0.24
CDC42EP3-206ENST00000611976 DIAPH1O60610 1272 aaKnown RBP13.52□□□□□ -0.24
CDC42EP3-206ENST00000611976 HTATSF1O43719 755 aaKnown RBP13.52□□□□□ -0.24
CDC42EP3-206ENST00000611976 ABCC5O15440 1437 aa13.52□□□□□ -0.25
CDC42EP3-206ENST00000611976 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.52□□□□□ -0.25
CDC42EP3-206ENST00000611976 MLECQ14165 292 aa13.51□□□□□ -0.25
CDC42EP3-206ENST00000611976 HDAC5Q9UQL6 1122 aa13.51□□□□□ -0.25
CDC42EP3-206ENST00000611976 KIAA0586Q9BVV6 1533 aa13.51□□□□□ -0.25
CDC42EP3-206ENST00000611976 HSP90AA2PQ14568 343 aaPredicted RBP13.51□□□□□ -0.25
CDC42EP3-206ENST00000611976 CAMSAP2Q08AD1 1489 aa13.51□□□□□ -0.25
CDC42EP3-206ENST00000611976 API5Q9BZZ5 524 aaKnown RBP13.51□□□□□ -0.25
CDC42EP3-206ENST00000611976 RIPK4P57078 832 aa13.5□□□□□ -0.25
CDC42EP3-206ENST00000611976 GPATCH3Q96I76 525 aa13.5□□□□□ -0.25
CDC42EP3-206ENST00000611976 SLC4A10Q6U841 1118 aa13.5□□□□□ -0.25
CDC42EP3-206ENST00000611976 NAP1L2Q9ULW6 460 aaPredicted RBP13.49□□□□□ -0.25
CDC42EP3-206ENST00000611976 REC8O95072 547 aa13.49□□□□□ -0.25
CDC42EP3-206ENST00000611976 CFAP43Q8NDM7 1665 aa13.48□□□□□ -0.25
CDC42EP3-206ENST00000611976 LMOD2Q6P5Q4 547 aa13.48□□□□□ -0.25
CDC42EP3-206ENST00000611976 TCP11L2Q8N4U5 519 aa13.48□□□□□ -0.25
CDC42EP3-206ENST00000611976 LAMC3Q9Y6N6 1575 aa13.48□□□□□ -0.25
CDC42EP3-206ENST00000611976 MRE11P49959 708 aa13.47□□□□□ -0.25
CDC42EP3-206ENST00000611976 COG3Q96JB2 828 aa13.47□□□□□ -0.25
CDC42EP3-206ENST00000611976 FRAT2O75474 233 aaPredicted RBP13.47□□□□□ -0.25
CDC42EP3-206ENST00000611976 SNAPC4Q5SXM2 1469 aa13.47□□□□□ -0.25
CDC42EP3-206ENST00000611976 ELL2O00472 640 aaPredicted RBP13.46□□□□□ -0.25
CDC42EP3-206ENST00000611976 NUCB2P80303 420 aa13.46□□□□□ -0.26
CDC42EP3-206ENST00000611976 GNAI1P63096 354 aa13.45□□□□□ -0.26
CDC42EP3-206ENST00000611976 MINK1Q8N4C8 1332 aaPredicted RBP13.45□□□□□ -0.26
CDC42EP3-206ENST00000611976 PDZRN3Q9UPQ7 1066 aa13.45□□□□□ -0.26
CDC42EP3-206ENST00000611976 MTHFSP49914 203 aa13.44□□□□□ -0.26
CDC42EP3-206ENST00000611976 UGGT2Q9NYU1 1516 aa13.44□□□□□ -0.26
CDC42EP3-206ENST00000611976 BCAR3O75815 825 aa13.44□□□□□ -0.26
CDC42EP3-206ENST00000611976 CT47B1P0C2W7 299 aaPredicted RBP13.44□□□□□ -0.26
CDC42EP3-206ENST00000611976 ATP6V1DQ9Y5K8 247 aa13.44□□□□□ -0.26
CDC42EP3-206ENST00000611976 NOL8Q76FK4 1167 aaKnown RBP13.44□□□□□ -0.26
CDC42EP3-206ENST00000611976 LNPKQ9C0E8 428 aa13.44□□□□□ -0.26
CDC42EP3-206ENST00000611976 INTS3Q68E01 1043 aaKnown RBP13.44□□□□□ -0.26
CDC42EP3-206ENST00000611976 CFAP70Q5T0N1 1121 aa13.43□□□□□ -0.26
CDC42EP3-206ENST00000611976 WDR63Q8IWG1 891 aa13.43□□□□□ -0.26
CDC42EP3-206ENST00000611976 CCDC141Q6ZP82 1450 aa13.43□□□□□ -0.26
CDC42EP3-206ENST00000611976 BRPF3Q9ULD4 1205 aa13.43□□□□□ -0.26
CDC42EP3-206ENST00000611976 FAM43AQ8N2R8 423 aa13.43□□□□□ -0.26
CDC42EP3-206ENST00000611976 CDK11BP21127 795 aaKnown RBP13.43□□□□□ -0.26
CDC42EP3-206ENST00000611976 SLFN5Q08AF3 891 aa13.42□□□□□ -0.26
CDC42EP3-206ENST00000611976 PTPRKQ15262 1439 aa13.42□□□□□ -0.26
CDC42EP3-206ENST00000611976 CDC45O75419 566 aa13.42□□□□□ -0.26
CDC42EP3-206ENST00000611976 TRAK2O60296 914 aa13.41□□□□□ -0.26
CDC42EP3-206ENST00000611976 AMPHP49418 695 aa13.41□□□□□ -0.26
CDC42EP3-206ENST00000611976 IL27Q8NEV9 243 aa13.41□□□□□ -0.26
CDC42EP3-206ENST00000611976 KIF14Q15058 1648 aa13.41□□□□□ -0.26
CDC42EP3-206ENST00000611976 FOXD4L5Q5VV16 416 aaPredicted RBP13.41□□□□□ -0.26
CDC42EP3-206ENST00000611976 FOXD4L4Q8WXT5 416 aaPredicted RBP13.41□□□□□ -0.26
CDC42EP3-206ENST00000611976 RILPL2Q969X0 211 aa13.41□□□□□ -0.26
CDC42EP3-206ENST00000611976 MAGI1Q96QZ7 1491 aaPredicted RBP13.4□□□□□ -0.26
CDC42EP3-206ENST00000611976 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.4□□□□□ -0.26
CDC42EP3-206ENST00000611976 ISY1Q9ULR0 285 aaKnown RBP13.39□□□□□ -0.27
CDC42EP3-206ENST00000611976 CTTNBP2Q8WZ74 1663 aa13.39□□□□□ -0.27
CDC42EP3-206ENST00000611976 A0A0G2JS52 829 aa13.39□□□□□ -0.27
CDC42EP3-206ENST00000611976 TPM4P67936 248 aa13.39□□□□□ -0.27
CDC42EP3-206ENST00000611976 NGDNQ8NEJ9 315 aaKnown RBP13.38□□□□□ -0.27
CDC42EP3-206ENST00000611976 GGNBP2Q9H3C7 697 aa13.38□□□□□ -0.27
CDC42EP3-206ENST00000611976 GCC1Q96CN9 775 aa13.38□□□□□ -0.27
CDC42EP3-206ENST00000611976 EXOSC9Q06265 439 aaKnown RBP13.38□□□□□ -0.27
CDC42EP3-206ENST00000611976 MVPQ14764 893 aaKnown RBP13.37□□□□□ -0.27
CDC42EP3-206ENST00000611976 ARHGEF11O15085 1522 aa13.37□□□□□ -0.27
CDC42EP3-206ENST00000611976 TCOF1Q13428 1488 aaKnown RBP13.37□□□□□ -0.27
CDC42EP3-206ENST00000611976 NKTRP30414 1462 aaKnown RBP13.37□□□□□ -0.27
CDC42EP3-206ENST00000611976 GNL2Q13823 731 aaKnown RBP13.37□□□□□ -0.27
CDC42EP3-206ENST00000611976 AFAP1Q8N556 730 aa13.37□□□□□ -0.27
CDC42EP3-206ENST00000611976 CABP2Q9NPB3 220 aa13.37□□□□□ -0.27
CDC42EP3-206ENST00000611976 RALGAPBQ86X10 1494 aa13.37□□□□□ -0.27
CDC42EP3-206ENST00000611976 TAOK2Q9UL54 1235 aa13.37□□□□□ -0.27
CDC42EP3-206ENST00000611976 KIF3AQ9Y496 699 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms