RNA–Protein interactions for RNA: ENST00000611967.4

PCSK6-215, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

TSL 1 (best) BASIC

Gene PCSK6, Length 3,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-215ENST00000611967 PANK2Q9BZ23 570 aa28.02■■■□□ 2.08
PCSK6-215ENST00000611967 PLPPR3Q6T4P5 718 aa28■■■□□ 2.07
PCSK6-215ENST00000611967 ABCC10Q5T3U5 1492 aa28■■■□□ 2.07
PCSK6-215ENST00000611967 MBD5Q9P267 1494 aa28■■■□□ 2.07
PCSK6-215ENST00000611967 DISP3Q9P2K9 1392 aa27.99■■■□□ 2.07
PCSK6-215ENST00000611967 SPINK5Q9NQ38 1064 aaPredicted RBP27.99■■■□□ 2.07
PCSK6-215ENST00000611967 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.98■■■□□ 2.075e-6■■■■□ 20.8
PCSK6-215ENST00000611967 SPAG9O60271 1321 aaKnown RBP27.98■■■□□ 2.07
PCSK6-215ENST00000611967 BCL2L13Q9BXK5 485 aa27.98■■■□□ 2.07
PCSK6-215ENST00000611967 ZCCHC11Q5TAX3 1644 aaKnown RBP27.97■■■□□ 2.07
PCSK6-215ENST00000611967 PPP2R1AP30153 589 aa27.97■■■□□ 2.07
PCSK6-215ENST00000611967 CLUAP1Q96AJ1 413 aa27.97■■■□□ 2.07
PCSK6-215ENST00000611967 SYCP2Q9BX26 1530 aa27.97■■■□□ 2.07
PCSK6-215ENST00000611967 ADCY10Q96PN6 1610 aa27.95■■■□□ 2.06
PCSK6-215ENST00000611967 HSP90AA1P07900 732 aaKnown RBP27.95■■■□□ 2.06
PCSK6-215ENST00000611967 HSP90AA2PQ14568 343 aaPredicted RBP27.95■■■□□ 2.06
PCSK6-215ENST00000611967 GGT6Q6P531 493 aa27.95■■■□□ 2.06
PCSK6-215ENST00000611967 KIF3BO15066 747 aa27.94■■■□□ 2.06
PCSK6-215ENST00000611967 TRAPPC8Q9Y2L5 1435 aa27.92■■■□□ 2.06
PCSK6-215ENST00000611967 TNNT2P45379 298 aaPredicted RBP27.92■■■□□ 2.06
PCSK6-215ENST00000611967 CDC42BPAQ5VT25 1732 aa27.92■■■□□ 2.06
PCSK6-215ENST00000611967 XRCC6P12956 609 aaKnown RBP eCLIP27.92■■■□□ 2.06
PCSK6-215ENST00000611967 SLFN5Q08AF3 891 aa27.92■■■□□ 2.06
PCSK6-215ENST00000611967 DNMT1P26358 1616 aaKnown RBP27.91■■■□□ 2.06
PCSK6-215ENST00000611967 SCAPERQ9BY12 1400 aa27.9■■■□□ 2.06
PCSK6-215ENST00000611967 RRP7AQ9Y3A4 280 aaKnown RBP27.9■■■□□ 2.06
PCSK6-215ENST00000611967 MLECQ14165 292 aa27.88■■■□□ 2.05
PCSK6-215ENST00000611967 MFAP1P55081 439 aaKnown RBP27.87■■■□□ 2.05
PCSK6-215ENST00000611967 USP19O94966 1318 aa27.87■■■□□ 2.05
PCSK6-215ENST00000611967 UHRF1BP1Q6BDS2 1440 aa27.87■■■□□ 2.05
PCSK6-215ENST00000611967 CCDC144AA2RUR9 1427 aa27.86■■■□□ 2.05
PCSK6-215ENST00000611967 TRHP20396 242 aaPredicted RBP27.86■■■□□ 2.05
PCSK6-215ENST00000611967 TBC1D2Q9BYX2 928 aa27.86■■■□□ 2.05
PCSK6-215ENST00000611967 WDR7Q9Y4E6 1490 aa27.86■■■□□ 2.05
PCSK6-215ENST00000611967 TESK2Q96S53 571 aa27.86■■■□□ 2.05
PCSK6-215ENST00000611967 CHGAP10645 457 aaKnown RBP27.85■■■□□ 2.05
PCSK6-215ENST00000611967 DMRT2Q9Y5R5 561 aa27.85■■■□□ 2.05
PCSK6-215ENST00000611967 ARHGEF12Q9NZN5 1544 aa27.84■■■□□ 2.05
PCSK6-215ENST00000611967 CENPJQ9HC77 1338 aaPredicted RBP27.84■■■□□ 2.05
PCSK6-215ENST00000611967 BLMP54132 1417 aaPredicted RBP27.84■■■□□ 2.05
PCSK6-215ENST00000611967 MAPK8IP3Q9UPT6 1336 aa27.83■■■□□ 2.05
PCSK6-215ENST00000611967 SAMD9LQ8IVG5 1584 aa27.83■■■□□ 2.05
PCSK6-215ENST00000611967 ZMYND15Q9H091 742 aa27.82■■■□□ 2.04
PCSK6-215ENST00000611967 TRIM44Q96DX7 344 aaPredicted RBP27.82■■■□□ 2.04
PCSK6-215ENST00000611967 PLCH2O75038 1416 aa27.81■■■□□ 2.04
PCSK6-215ENST00000611967 FANCAO15360 1455 aa27.8■■■□□ 2.04
PCSK6-215ENST00000611967 ITSN2Q9NZM3 1697 aa27.8■■■□□ 2.04
PCSK6-215ENST00000611967 TNNQ9UQP3 1299 aa27.8■■■□□ 2.04
PCSK6-215ENST00000611967 ERBINQ96RT1 1412 aa27.79■■■□□ 2.04
PCSK6-215ENST00000611967 MYH16Q9H6N6 1097 aa27.79■■■□□ 2.04
PCSK6-215ENST00000611967 CD109Q6YHK3 1445 aa27.79■■■□□ 2.04
PCSK6-215ENST00000611967 PLEKHH2Q8IVE3 1493 aa27.79■■■□□ 2.04
PCSK6-215ENST00000611967 CDC42BPBQ9Y5S2 1711 aa27.79■■■□□ 2.04
PCSK6-215ENST00000611967 ZMYM4Q5VZL5 1548 aa27.79■■■□□ 2.04
PCSK6-215ENST00000611967 TRAK2O60296 914 aa27.79■■■□□ 2.04
PCSK6-215ENST00000611967 MCM4P33991 863 aa27.79■■■□□ 2.04
PCSK6-215ENST00000611967 CGNL1Q0VF96 1302 aa27.78■■■□□ 2.04
PCSK6-215ENST00000611967 CCDC141Q6ZP82 1450 aa27.78■■■□□ 2.04
PCSK6-215ENST00000611967 PDZRN3Q9UPQ7 1066 aa27.77■■■□□ 2.04
PCSK6-215ENST00000611967 E9PSI1 815 aa27.77■■■□□ 2.04
PCSK6-215ENST00000611967 FOXD4L1Q9NU39 408 aa27.77■■■□□ 2.04
PCSK6-215ENST00000611967 ADGRL1O94910 1474 aa27.72■■■□□ 2.03
PCSK6-215ENST00000611967 NUTM2DQ5VT03 806 aaPredicted RBP27.72■■■□□ 2.03
PCSK6-215ENST00000611967 PRAG1Q86YV5 1406 aa27.7■■■□□ 2.03
PCSK6-215ENST00000611967 PCDHB15Q9Y5E8 787 aa27.7■■■□□ 2.03
PCSK6-215ENST00000611967 ANTXR1Q9H6X2 564 aa27.7■■■□□ 2.02
PCSK6-215ENST00000611967 UHRF1BP1LA0JNW5 1464 aa27.69■■■□□ 2.02
PCSK6-215ENST00000611967 RSPH4AQ5TD94 716 aa27.69■■■□□ 2.02
PCSK6-215ENST00000611967 TBC1D32Q96NH3 1257 aa27.69■■■□□ 2.02
PCSK6-215ENST00000611967 PMFBP1Q8TBY8 1022 aa27.68■■■□□ 2.02
PCSK6-215ENST00000611967 EIF3AQ14152 1382 aaKnown RBP27.68■■■□□ 2.02
PCSK6-215ENST00000611967 AMER1Q5JTC6 1135 aaPredicted RBP27.67■■■□□ 2.02
PCSK6-215ENST00000611967 HSCBQ8IWL3 235 aa27.67■■■□□ 2.02
PCSK6-215ENST00000611967 ARID3AQ99856 593 aa27.67■■■□□ 2.02
PCSK6-215ENST00000611967 C22orf23Q9BZE7 217 aa27.67■■■□□ 2.02
PCSK6-215ENST00000611967 CHMP5Q9NZZ3 219 aa27.67■■■□□ 2.02
PCSK6-215ENST00000611967 ZNF521Q96K83 1311 aa27.66■■■□□ 2.02
PCSK6-215ENST00000611967 NKTRP30414 1462 aaKnown RBP27.66■■■□□ 2.02
PCSK6-215ENST00000611967 CLCN1P35523 988 aa27.66■■■□□ 2.02
PCSK6-215ENST00000611967 PDE3AQ14432 1141 aa27.66■■■□□ 2.02
PCSK6-215ENST00000611967 FTSJ3Q8IY81 847 aaKnown RBP27.65■■■□□ 2.02
PCSK6-215ENST00000611967 RLBP1P12271 317 aa27.64■■■□□ 2.02
PCSK6-215ENST00000611967 GRPEL1Q9HAV7 217 aa27.64■■■□□ 2.02
PCSK6-215ENST00000611967 PREX2Q70Z35 1606 aa27.64■■■□□ 2.02
PCSK6-215ENST00000611967 ESPNB1AK53 854 aa27.64■■■□□ 2.02
PCSK6-215ENST00000611967 MRE11P49959 708 aa27.64■■■□□ 2.02
PCSK6-215ENST00000611967 RWDD1Q9H446 243 aaPredicted RBP27.64■■■□□ 2.02
PCSK6-215ENST00000611967 MYO5CQ9NQX4 1742 aa27.64■■■□□ 2.02
PCSK6-215ENST00000611967 COL17A1Q9UMD9 1497 aaPredicted RBP27.63■■■□□ 2.01
PCSK6-215ENST00000611967 CDCA8Q53HL2 280 aa27.61■■■□□ 2.01
PCSK6-215ENST00000611967 RIMBP3CA6NJZ7 1639 aa27.6■■■□□ 2.01
PCSK6-215ENST00000611967 RIMBP3BA6NNM3 1639 aa27.6■■■□□ 2.01
PCSK6-215ENST00000611967 RIMBP3Q9UFD9 1639 aa27.6■■■□□ 2.01
PCSK6-215ENST00000611967 HSP90AB1P08238 724 aaKnown RBP27.59■■■□□ 2.01
PCSK6-215ENST00000611967 WWC1Q8IX03 1113 aa27.59■■■□□ 2.01
PCSK6-215ENST00000611967 RRP9O43818 475 aaKnown RBP27.58■■■□□ 2.01
PCSK6-215ENST00000611967 TSPOAP1O95153 1857 aa27.57■■■□□ 2
PCSK6-215ENST00000611967 MAGI2Q86UL8 1455 aa27.55■■■□□ 2
PCSK6-215ENST00000611967 NCLP19338 710 aaKnown RBP27.54■■■□□ 2
PCSK6-215ENST00000611967 FSD2A1L4K1 749 aa27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms