RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 DHX29Q7Z478 1369 aaKnown RBP14.36□□□□□ -0.11
PCDHGC3-202ENST00000611950 ARHGEF12Q9NZN5 1544 aa14.36□□□□□ -0.11
PCDHGC3-202ENST00000611950 UHRF1BP1Q6BDS2 1440 aa14.36□□□□□ -0.11
PCDHGC3-202ENST00000611950 PREX2Q70Z35 1606 aa14.36□□□□□ -0.11
PCDHGC3-202ENST00000611950 ZBED9Q6R2W3 1325 aa14.36□□□□□ -0.11
PCDHGC3-202ENST00000611950 SAMD1Q6SPF0 538 aaPredicted RBP14.36□□□□□ -0.11
PCDHGC3-202ENST00000611950 ARHGAP5Q13017 1502 aa14.35□□□□□ -0.11
PCDHGC3-202ENST00000611950 RSPH4AQ5TD94 716 aa14.35□□□□□ -0.11
PCDHGC3-202ENST00000611950 CCDC141Q6ZP82 1450 aa14.35□□□□□ -0.11
PCDHGC3-202ENST00000611950 RALGAPBQ86X10 1494 aa14.35□□□□□ -0.11
PCDHGC3-202ENST00000611950 CARD11Q9BXL7 1154 aa14.34□□□□□ -0.11
PCDHGC3-202ENST00000611950 ZNF518AQ6AHZ1 1483 aa14.34□□□□□ -0.11
PCDHGC3-202ENST00000611950 SETD1BQ9UPS6 1966 aaKnown RBP14.33□□□□□ -0.12
PCDHGC3-202ENST00000611950 RGL3Q3MIN7 710 aa14.33□□□□□ -0.12
PCDHGC3-202ENST00000611950 TMC1Q8TDI8 760 aa14.32□□□□□ -0.12
PCDHGC3-202ENST00000611950 DCAF11Q8TEB1 546 aa14.32□□□□□ -0.12
PCDHGC3-202ENST00000611950 SYCP2Q9BX26 1530 aa14.32□□□□□ -0.12
PCDHGC3-202ENST00000611950 FAM135AQ9P2D6 1515 aa14.31□□□□□ -0.12
PCDHGC3-202ENST00000611950 HAP1P54257 671 aaPredicted RBP14.31□□□□□ -0.12
PCDHGC3-202ENST00000611950 ESF1Q9H501 851 aaKnown RBP14.31□□□□□ -0.12
PCDHGC3-202ENST00000611950 ST20-MTHFSA0A0A6YYL1 179 aa14.31□□□□□ -0.12
PCDHGC3-202ENST00000611950 DMRT2Q9Y5R5 561 aa14.31□□□□□ -0.12
PCDHGC3-202ENST00000611950 STRCQ7RTU9 1775 aa14.3□□□□□ -0.12
PCDHGC3-202ENST00000611950 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.3□□□□□ -0.12
PCDHGC3-202ENST00000611950 DISP3Q9P2K9 1392 aa14.29□□□□□ -0.12
PCDHGC3-202ENST00000611950 DIP2CQ9Y2E4 1556 aa14.28□□□□□ -0.12
PCDHGC3-202ENST00000611950 ABCA6Q8N139 1617 aa14.26□□□□□ -0.13
PCDHGC3-202ENST00000611950 C14orf37Q86TY3 774 aa14.26□□□□□ -0.13
PCDHGC3-202ENST00000611950 C3P01024 1663 aa14.26□□□□□ -0.13
PCDHGC3-202ENST00000611950 PLCB2Q00722 1185 aa14.26□□□□□ -0.13
PCDHGC3-202ENST00000611950 NBR1Q14596 966 aa14.26□□□□□ -0.13
PCDHGC3-202ENST00000611950 MAST1Q9Y2H9 1570 aa14.25□□□□□ -0.13
PCDHGC3-202ENST00000611950 PLA2R1Q13018 1463 aa14.25□□□□□ -0.13
PCDHGC3-202ENST00000611950 FANCIQ9NVI1 1328 aa14.24□□□□□ -0.13
PCDHGC3-202ENST00000611950 NUDCQ9Y266 331 aa14.24□□□□□ -0.13
PCDHGC3-202ENST00000611950 UNC13BO14795 1591 aa14.24□□□□□ -0.13
PCDHGC3-202ENST00000611950 TRAPPC8Q9Y2L5 1435 aa14.24□□□□□ -0.13
PCDHGC3-202ENST00000611950 CCDC144AA2RUR9 1427 aa14.23□□□□□ -0.13
PCDHGC3-202ENST00000611950 ILDR2Q71H61 639 aa14.23□□□□□ -0.13
PCDHGC3-202ENST00000611950 ROCK2O75116 1388 aaKnown RBP14.23□□□□□ -0.13
PCDHGC3-202ENST00000611950 PLEKHH2Q8IVE3 1493 aa14.23□□□□□ -0.13
PCDHGC3-202ENST00000611950 MLH3Q9UHC1 1453 aa14.22□□□□□ -0.13
PCDHGC3-202ENST00000611950 PNISRQ8TF01 805 aaKnown RBP14.22□□□□□ -0.13
PCDHGC3-202ENST00000611950 PRAG1Q86YV5 1406 aa14.22□□□□□ -0.13
PCDHGC3-202ENST00000611950 ABCC1P33527 1531 aa14.21□□□□□ -0.13
PCDHGC3-202ENST00000611950 REREQ9P2R6 1566 aa14.21□□□□□ -0.13
PCDHGC3-202ENST00000611950 NBPF1Q3BBV0 1214 aa14.21□□□□□ -0.13
PCDHGC3-202ENST00000611950 PLXNC1O60486 1568 aa14.21□□□□□ -0.13
PCDHGC3-202ENST00000611950 PAK3O75914 559 aaPredicted RBP14.21□□□□□ -0.14
PCDHGC3-202ENST00000611950 NAP1L5Q96NT1 182 aaPredicted RBP14.21□□□□□ -0.14
PCDHGC3-202ENST00000611950 TRPM1Q7Z4N2 1603 aa14.2□□□□□ -0.14
PCDHGC3-202ENST00000611950 CC2D1BQ5T0F9 858 aaKnown RBP14.2□□□□□ -0.14
PCDHGC3-202ENST00000611950 A2MP01023 1474 aa14.2□□□□□ -0.14
PCDHGC3-202ENST00000611950 KIDINS220Q9ULH0 1771 aa14.2□□□□□ -0.14
PCDHGC3-202ENST00000611950 PTPRTO14522 1441 aa14.19□□□□□ -0.14
PCDHGC3-202ENST00000611950 IQGAP3Q86VI3 1631 aa14.19□□□□□ -0.14
PCDHGC3-202ENST00000611950 AGLP35573 1532 aa14.18□□□□□ -0.14
PCDHGC3-202ENST00000611950 E9PCH4 1651 aa14.18□□□□□ -0.14
PCDHGC3-202ENST00000611950 SMG6Q86US8 1419 aaKnown RBP14.17□□□□□ -0.14
PCDHGC3-202ENST00000611950 SKAP1Q86WV1 359 aa14.16□□□□□ -0.14
PCDHGC3-202ENST00000611950 DUOX2Q9NRD8 1548 aa14.16□□□□□ -0.14
PCDHGC3-202ENST00000611950 CDCA7LQ96GN5 454 aa14.16□□□□□ -0.14
PCDHGC3-202ENST00000611950 NAP1L2Q9ULW6 460 aaPredicted RBP14.16□□□□□ -0.14
PCDHGC3-202ENST00000611950 SOCS7O14512 581 aa14.15□□□□□ -0.14
PCDHGC3-202ENST00000611950 EXOC6Q8TAG9 804 aa14.15□□□□□ -0.14
PCDHGC3-202ENST00000611950 GPRASP1Q5JY77 1395 aa14.15□□□□□ -0.14
PCDHGC3-202ENST00000611950 PLIN1O60240 522 aa14.15□□□□□ -0.14
PCDHGC3-202ENST00000611950 SPAG9O60271 1321 aaKnown RBP14.15□□□□□ -0.15
PCDHGC3-202ENST00000611950 SPATA31D1Q6ZQQ2 1576 aa14.14□□□□□ -0.15
PCDHGC3-202ENST00000611950 CAMSAP1Q5T5Y3 1602 aa14.14□□□□□ -0.15
PCDHGC3-202ENST00000611950 ERBINQ96RT1 1412 aa14.14□□□□□ -0.15
PCDHGC3-202ENST00000611950 LTBP4Q8N2S1 1624 aa14.14□□□□□ -0.15
PCDHGC3-202ENST00000611950 ZMYM3Q14202 1370 aa14.12□□□□□ -0.15
PCDHGC3-202ENST00000611950 MYBBP1AQ9BQG0 1328 aaKnown RBP14.12□□□□□ -0.15
PCDHGC3-202ENST00000611950 NCKAP5LQ9HCH0 1330 aa14.12□□□□□ -0.15
PCDHGC3-202ENST00000611950 CNKSR2Q8WXI2 1034 aa14.12□□□□□ -0.15
PCDHGC3-202ENST00000611950 NOP58Q9Y2X3 529 aaKnown RBP14.12□□□□□ -0.15
PCDHGC3-202ENST00000611950 LRPPRCP42704 1394 aaKnown RBP14.12□□□□□ -0.15
PCDHGC3-202ENST00000611950 PRDM15P57071 1507 aaPredicted RBP14.12□□□□□ -0.15
PCDHGC3-202ENST00000611950 GGT6Q6P531 493 aa14.11□□□□□ -0.15
PCDHGC3-202ENST00000611950 BRD4O60885 1362 aaPredicted RBP14.11□□□□□ -0.15
PCDHGC3-202ENST00000611950 RALBP1Q15311 655 aa14.11□□□□□ -0.15
PCDHGC3-202ENST00000611950 TESK2Q96S53 571 aa14.11□□□□□ -0.15
PCDHGC3-202ENST00000611950 MROH2AA6NES4 1674 aa14.11□□□□□ -0.15
PCDHGC3-202ENST00000611950 CLTCQ00610 1675 aaKnown RBP14.11□□□□□ -0.15
PCDHGC3-202ENST00000611950 ZNF335Q9H4Z2 1342 aaPredicted RBP14.1□□□□□ -0.15
PCDHGC3-202ENST00000611950 KTN1Q86UP2 1357 aaKnown RBP14.1□□□□□ -0.15
PCDHGC3-202ENST00000611950 LAMC1P11047 1609 aa14.09□□□□□ -0.15
PCDHGC3-202ENST00000611950 NPATQ14207 1427 aa14.09□□□□□ -0.15
PCDHGC3-202ENST00000611950 UBAP1LF5GYI3 381 aa14.09□□□□□ -0.15
PCDHGC3-202ENST00000611950 PER1O15534 1290 aaPredicted RBP14.09□□□□□ -0.15
PCDHGC3-202ENST00000611950 PARD3Q8TEW0 1356 aa14.09□□□□□ -0.15
PCDHGC3-202ENST00000611950 ATP7AQ04656 1500 aa14.09□□□□□ -0.15
PCDHGC3-202ENST00000611950 RCAN3Q9UKA8 241 aa14.09□□□□□ -0.15
PCDHGC3-202ENST00000611950 RRP1P56182 461 aaKnown RBP14.08□□□□□ -0.16
PCDHGC3-202ENST00000611950 RNF123Q5XPI4 1314 aa14.08□□□□□ -0.16
PCDHGC3-202ENST00000611950 ANP32AP39687 249 aaKnown RBP14.08□□□□□ -0.16
PCDHGC3-202ENST00000611950 EIF2AK4Q9P2K8 1649 aaKnown RBP14.07□□□□□ -0.16
PCDHGC3-202ENST00000611950 PANK3Q9H999 370 aa14.07□□□□□ -0.16
PCDHGC3-202ENST00000611950 IQSEC2Q5JU85 1478 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms