RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 GSE1Q14687 1217 aa19.74■□□□□ 0.75
PCDHGB1-202ENST00000611598 BRPF3Q9ULD4 1205 aa19.74■□□□□ 0.75
PCDHGB1-202ENST00000611598 SPINK5Q9NQ38 1064 aaPredicted RBP19.73■□□□□ 0.75
PCDHGB1-202ENST00000611598 ATP10AO60312 1499 aa19.72■□□□□ 0.75
PCDHGB1-202ENST00000611598 DAXXQ9UER7 740 aaPredicted RBP19.72■□□□□ 0.75
PCDHGB1-202ENST00000611598 CHD1O14646 1710 aa19.72■□□□□ 0.75
PCDHGB1-202ENST00000611598 SLFN5Q08AF3 891 aa19.72■□□□□ 0.75
PCDHGB1-202ENST00000611598 PLXNC1O60486 1568 aa19.71■□□□□ 0.75
PCDHGB1-202ENST00000611598 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.71■□□□□ 0.75
PCDHGB1-202ENST00000611598 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.7■□□□□ 0.74
PCDHGB1-202ENST00000611598 FRAT1Q92837 279 aaPredicted RBP19.7■□□□□ 0.74
PCDHGB1-202ENST00000611598 BCAR3O75815 825 aa19.68■□□□□ 0.74
PCDHGB1-202ENST00000611598 MADDQ8WXG6 1647 aa19.68■□□□□ 0.74
PCDHGB1-202ENST00000611598 IQGAP1P46940 1657 aa19.67■□□□□ 0.74
PCDHGB1-202ENST00000611598 DUOX2Q9NRD8 1548 aa19.67■□□□□ 0.74
PCDHGB1-202ENST00000611598 TRMT2AQ8IZ69 625 aaKnown RBP19.67■□□□□ 0.74
PCDHGB1-202ENST00000611598 CLASP1Q7Z460 1538 aa19.66■□□□□ 0.74
PCDHGB1-202ENST00000611598 ASXL1Q8IXJ9 1541 aa19.66■□□□□ 0.74
PCDHGB1-202ENST00000611598 APAF1O14727 1248 aa19.66■□□□□ 0.74
PCDHGB1-202ENST00000611598 SYNMO15061 1565 aa19.66■□□□□ 0.74
PCDHGB1-202ENST00000611598 PIK3C2GO75747 1445 aa19.65■□□□□ 0.74
PCDHGB1-202ENST00000611598 DMRT2Q9Y5R5 561 aa19.65■□□□□ 0.74
PCDHGB1-202ENST00000611598 FRAT2O75474 233 aaPredicted RBP19.64■□□□□ 0.73
PCDHGB1-202ENST00000611598 NKTRP30414 1462 aaKnown RBP19.63■□□□□ 0.73
PCDHGB1-202ENST00000611598 SCAF11Q99590 1463 aaKnown RBP19.62■□□□□ 0.73
PCDHGB1-202ENST00000611598 EIF3AQ14152 1382 aaKnown RBP19.62■□□□□ 0.73
PCDHGB1-202ENST00000611598 IGHDP01880 384 aa19.62■□□□□ 0.73
PCDHGB1-202ENST00000611598 MYOM1P52179 1685 aa19.62■□□□□ 0.73
PCDHGB1-202ENST00000611598 CDCA8Q53HL2 280 aa19.61■□□□□ 0.73
PCDHGB1-202ENST00000611598 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.61■□□□□ 0.73
PCDHGB1-202ENST00000611598 PRKCSHP14314 528 aaPredicted RBP19.59■□□□□ 0.73
PCDHGB1-202ENST00000611598 ABCC2Q92887 1545 aa19.59■□□□□ 0.73
PCDHGB1-202ENST00000611598 USP19O94966 1318 aa19.58■□□□□ 0.72
PCDHGB1-202ENST00000611598 SPHKAPQ2M3C7 1700 aa19.57■□□□□ 0.72
PCDHGB1-202ENST00000611598 NPC1L1Q9UHC9 1359 aa19.57■□□□□ 0.72
PCDHGB1-202ENST00000611598 E9PSI1 815 aa19.56■□□□□ 0.72
PCDHGB1-202ENST00000611598 SCAPERQ9BY12 1400 aa19.56■□□□□ 0.72
PCDHGB1-202ENST00000611598 TRAPPC8Q9Y2L5 1435 aa19.56■□□□□ 0.72
PCDHGB1-202ENST00000611598 SEC24BO95487 1268 aa19.56■□□□□ 0.72
PCDHGB1-202ENST00000611598 TRPM2O94759 1503 aa19.54■□□□□ 0.72
PCDHGB1-202ENST00000611598 PANK1Q8TE04 598 aa19.54■□□□□ 0.72
PCDHGB1-202ENST00000611598 CLTCL1P53675 1640 aa19.54■□□□□ 0.72
PCDHGB1-202ENST00000611598 CARD14Q9BXL6 1004 aa19.54■□□□□ 0.72
PCDHGB1-202ENST00000611598 COG6Q9Y2V7 657 aa19.53■□□□□ 0.72
PCDHGB1-202ENST00000611598 OSCARQ8IYS5 282 aa19.52■□□□□ 0.72
PCDHGB1-202ENST00000611598 CEP152O94986 1710 aa19.51■□□□□ 0.71
PCDHGB1-202ENST00000611598 KDM5AP29375 1690 aaKnown RBP19.51■□□□□ 0.71
PCDHGB1-202ENST00000611598 PLCH2O75038 1416 aa19.51■□□□□ 0.71
PCDHGB1-202ENST00000611598 CLUAP1Q96AJ1 413 aa19.5■□□□□ 0.71
PCDHGB1-202ENST00000611598 CGNL1Q0VF96 1302 aa19.5■□□□□ 0.71
PCDHGB1-202ENST00000611598 CENPJQ9HC77 1338 aaPredicted RBP19.5■□□□□ 0.71
PCDHGB1-202ENST00000611598 ERCC6L2Q5T890 1561 aa19.5■□□□□ 0.71
PCDHGB1-202ENST00000611598 VIRMAQ69YN4 1812 aaKnown RBP19.5■□□□□ 0.71
PCDHGB1-202ENST00000611598 PTPRTO14522 1441 aa19.5■□□□□ 0.71
PCDHGB1-202ENST00000611598 ABCC1P33527 1531 aa19.49■□□□□ 0.71
PCDHGB1-202ENST00000611598 PDE3AQ14432 1141 aa19.49■□□□□ 0.71
PCDHGB1-202ENST00000611598 CFAP70Q5T0N1 1121 aa19.49■□□□□ 0.71
PCDHGB1-202ENST00000611598 EFCAB2Q5VUJ9 269 aa19.49■□□□□ 0.71
PCDHGB1-202ENST00000611598 ERVK-7P63135 1459 aa19.49■□□□□ 0.71
PCDHGB1-202ENST00000611598 CANXP27824 592 aaKnown RBP19.49■□□□□ 0.71
PCDHGB1-202ENST00000611598 WWC1Q8IX03 1113 aa19.49■□□□□ 0.71
PCDHGB1-202ENST00000611598 AFAP1Q8N556 730 aa19.48■□□□□ 0.71
PCDHGB1-202ENST00000611598 SPAG9O60271 1321 aaKnown RBP19.47■□□□□ 0.71
PCDHGB1-202ENST00000611598 NEUROD2Q15784 382 aa19.46■□□□□ 0.71
PCDHGB1-202ENST00000611598 SLKQ9H2G2 1235 aaPredicted RBP19.45■□□□□ 0.7
PCDHGB1-202ENST00000611598 TNNQ9UQP3 1299 aa19.45■□□□□ 0.7
PCDHGB1-202ENST00000611598 RRP7AQ9Y3A4 280 aaKnown RBP19.45■□□□□ 0.7
PCDHGB1-202ENST00000611598 MAPK8IP3Q9UPT6 1336 aa19.45■□□□□ 0.7
PCDHGB1-202ENST00000611598 NLRP1Q9C000 1473 aa19.45■□□□□ 0.7
PCDHGB1-202ENST00000611598 STAC3Q96MF2 364 aa19.45■□□□□ 0.7
PCDHGB1-202ENST00000611598 POGKQ9P215 609 aa19.45■□□□□ 0.7
PCDHGB1-202ENST00000611598 ADGRF5Q8IZF2 1346 aa19.44■□□□□ 0.7
PCDHGB1-202ENST00000611598 TNNT2P45379 298 aaPredicted RBP19.43■□□□□ 0.7
PCDHGB1-202ENST00000611598 SHROOM2Q13796 1616 aa19.43■□□□□ 0.7
PCDHGB1-202ENST00000611598 UGGT1Q9NYU2 1555 aa19.43■□□□□ 0.7
PCDHGB1-202ENST00000611598 RLBP1P12271 317 aa19.42■□□□□ 0.7
PCDHGB1-202ENST00000611598 PCDHB15Q9Y5E8 787 aa19.42■□□□□ 0.7
PCDHGB1-202ENST00000611598 NINLQ9Y2I6 1382 aa19.42■□□□□ 0.7
PCDHGB1-202ENST00000611598 ZFYVE16Q7Z3T8 1539 aa19.42■□□□□ 0.7
PCDHGB1-202ENST00000611598 NGEFQ8N5V2 710 aa19.41■□□□□ 0.7
PCDHGB1-202ENST00000611598 BCL2L13Q9BXK5 485 aa19.41■□□□□ 0.7
PCDHGB1-202ENST00000611598 RARSP54136 660 aaKnown RBP19.41■□□□□ 0.7
PCDHGB1-202ENST00000611598 ABCA6Q8N139 1617 aa19.41■□□□□ 0.7
PCDHGB1-202ENST00000611598 POLR3AO14802 1390 aaPredicted RBP19.41■□□□□ 0.7
PCDHGB1-202ENST00000611598 KIAA1210Q9ULL0 1709 aa19.4■□□□□ 0.7
PCDHGB1-202ENST00000611598 TET3O43151 1660 aa19.39■□□□□ 0.69
PCDHGB1-202ENST00000611598 BECN1Q14457 450 aa19.39■□□□□ 0.69
PCDHGB1-202ENST00000611598 DEPDC5O75140 1603 aa19.38■□□□□ 0.69
PCDHGB1-202ENST00000611598 MAP3K4Q9Y6R4 1608 aa19.38■□□□□ 0.69
PCDHGB1-202ENST00000611598 ZCCHC11Q5TAX3 1644 aaKnown RBP19.37■□□□□ 0.69
PCDHGB1-202ENST00000611598 SHPRHQ149N8 1683 aa19.37■□□□□ 0.69
PCDHGB1-202ENST00000611598 TCP11L2Q8N4U5 519 aa19.37■□□□□ 0.69
PCDHGB1-202ENST00000611598 ANTXR1Q9H6X2 564 aa19.37■□□□□ 0.69
PCDHGB1-202ENST00000611598 KIF3BO15066 747 aa19.37■□□□□ 0.69
PCDHGB1-202ENST00000611598 RTEL1-TNFRSF6BF6WH68 1400 aa19.36■□□□□ 0.69
PCDHGB1-202ENST00000611598 NSD3Q9BZ95 1437 aa19.36■□□□□ 0.69
PCDHGB1-202ENST00000611598 PDZRN3Q9UPQ7 1066 aa19.36■□□□□ 0.69
PCDHGB1-202ENST00000611598 MORC1Q86VD1 984 aa19.36■□□□□ 0.69
PCDHGB1-202ENST00000611598 PMFBP1Q8TBY8 1022 aa19.35■□□□□ 0.69
PCDHGB1-202ENST00000611598 RUNDC1Q96C34 613 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms