RNA–Protein interactions for RNA: ENST00000611589.4

NRXN1-220, Transcript of neurexin 1, humanhuman

TSL 5 BASIC

Gene NRXN1, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-220ENST00000611589 CCDC184Q52MB2 194 aa24.59■■□□□ 1.53
NRXN1-220ENST00000611589 EIF3AQ14152 1382 aaKnown RBP24.59■■□□□ 1.53
NRXN1-220ENST00000611589 DISP3Q9P2K9 1392 aa24.59■■□□□ 1.53
NRXN1-220ENST00000611589 TSPOAP1O95153 1857 aa24.58■■□□□ 1.53
NRXN1-220ENST00000611589 SETBP1Q9Y6X0 1596 aa24.57■■□□□ 1.52
NRXN1-220ENST00000611589 CFAP65Q6ZU64 1925 aaKnown RBP24.57■■□□□ 1.52
NRXN1-220ENST00000611589 HNRNPUQ00839 825 aaKnown RBP eCLIP24.57■■□□□ 1.52
NRXN1-220ENST00000611589 SYNMO15061 1565 aa24.55■■□□□ 1.52
NRXN1-220ENST00000611589 RALBP1Q15311 655 aa24.55■■□□□ 1.52
NRXN1-220ENST00000611589 RPGRIP1LQ68CZ1 1315 aa24.54■■□□□ 1.52
NRXN1-220ENST00000611589 MYO3AQ8NEV4 1616 aa24.54■■□□□ 1.52
NRXN1-220ENST00000611589 AGLP35573 1532 aa24.53■■□□□ 1.52
NRXN1-220ENST00000611589 KIF13AQ9H1H9 1805 aa24.53■■□□□ 1.52
NRXN1-220ENST00000611589 SLC24A1O60721 1099 aa24.51■■□□□ 1.51
NRXN1-220ENST00000611589 CDCA8Q53HL2 280 aa24.5■■□□□ 1.51
NRXN1-220ENST00000611589 PREX1Q8TCU6 1659 aa24.5■■□□□ 1.51
NRXN1-220ENST00000611589 BRD4O60885 1362 aaPredicted RBP24.5■■□□□ 1.51
NRXN1-220ENST00000611589 SUPT16HQ9Y5B9 1047 aaKnown RBP24.49■■□□□ 1.51
NRXN1-220ENST00000611589 ADGRF5Q8IZF2 1346 aa24.49■■□□□ 1.51
NRXN1-220ENST00000611589 MYBBP1AQ9BQG0 1328 aaKnown RBP24.49■■□□□ 1.51
NRXN1-220ENST00000611589 PARD3Q8TEW0 1356 aa24.48■■□□□ 1.51
NRXN1-220ENST00000611589 PIK3C2GO75747 1445 aa24.48■■□□□ 1.51
NRXN1-220ENST00000611589 KDM5AP29375 1690 aaKnown RBP24.47■■□□□ 1.51
NRXN1-220ENST00000611589 PER1O15534 1290 aaPredicted RBP24.47■■□□□ 1.51
NRXN1-220ENST00000611589 FAM9BQ8IZU0 186 aa24.47■■□□□ 1.51
NRXN1-220ENST00000611589 ZBED9Q6R2W3 1325 aa24.47■■□□□ 1.51
NRXN1-220ENST00000611589 NEXMIFQ5QGS0 1516 aa24.44■■□□□ 1.5
NRXN1-220ENST00000611589 SBNO2Q9Y2G9 1366 aa24.44■■□□□ 1.5
NRXN1-220ENST00000611589 MYOM1P52179 1685 aa24.44■■□□□ 1.5
NRXN1-220ENST00000611589 CFAP70Q5T0N1 1121 aa24.43■■□□□ 1.5
NRXN1-220ENST00000611589 PPP6R1Q9UPN7 881 aa24.43■■□□□ 1.5
NRXN1-220ENST00000611589 ARHGEF40Q8TER5 1519 aa24.42■■□□□ 1.5
NRXN1-220ENST00000611589 SLC52A1Q9NWF4 448 aa24.41■■□□□ 1.5
NRXN1-220ENST00000611589 ADGRB1O14514 1584 aa24.4■■□□□ 1.5
NRXN1-220ENST00000611589 CHGAP10645 457 aaKnown RBP24.4■■□□□ 1.5
NRXN1-220ENST00000611589 ZFYVE9O95405 1425 aa24.39■■□□□ 1.5
NRXN1-220ENST00000611589 TMC1Q8TDI8 760 aa24.39■■□□□ 1.5
NRXN1-220ENST00000611589 PNISRQ8TF01 805 aaKnown RBP24.38■■□□□ 1.49
NRXN1-220ENST00000611589 PANK3Q9H999 370 aa24.38■■□□□ 1.49
NRXN1-220ENST00000611589 NEFLP07196 543 aa24.38■■□□□ 1.49
NRXN1-220ENST00000611589 C14orf93Q9H972 538 aaKnown RBP24.38■■□□□ 1.49
NRXN1-220ENST00000611589 LRPPRCP42704 1394 aaKnown RBP24.38■■□□□ 1.49
NRXN1-220ENST00000611589 TMEM131LA2VDJ0 1609 aa24.37■■□□□ 1.49
NRXN1-220ENST00000611589 NLRP13Q86W25 1043 aa24.37■■□□□ 1.49
NRXN1-220ENST00000611589 ERVK-7P63135 1459 aa24.36■■□□□ 1.49
NRXN1-220ENST00000611589 MYO5BQ9ULV0 1848 aa24.35■■□□□ 1.49
NRXN1-220ENST00000611589 QRICH2Q9H0J4 1663 aa24.34■■□□□ 1.49
NRXN1-220ENST00000611589 VGFO15240 615 aaPredicted RBP24.34■■□□□ 1.49
NRXN1-220ENST00000611589 CLTCQ00610 1675 aaKnown RBP24.33■■□□□ 1.49
NRXN1-220ENST00000611589 CNGB1Q14028 1251 aaPredicted RBP24.32■■□□□ 1.48
NRXN1-220ENST00000611589 INSRP06213 1382 aa24.31■■□□□ 1.48
NRXN1-220ENST00000611589 NPC1L1Q9UHC9 1359 aa24.31■■□□□ 1.48
NRXN1-220ENST00000611589 ASXL1Q8IXJ9 1541 aa24.3■■□□□ 1.48
NRXN1-220ENST00000611589 IDI1Q13907 227 aa24.3■■□□□ 1.48
NRXN1-220ENST00000611589 SPATA31D1Q6ZQQ2 1576 aa24.29■■□□□ 1.48
NRXN1-220ENST00000611589 CENPJQ9HC77 1338 aaPredicted RBP24.29■■□□□ 1.48
NRXN1-220ENST00000611589 ARHGEF28Q8N1W1 1705 aaKnown RBP24.29■■□□□ 1.48
NRXN1-220ENST00000611589 FKBP8Q14318 412 aa24.28■■□□□ 1.48
NRXN1-220ENST00000611589 KNSTRNQ9Y448 316 aa24.26■■□□□ 1.47
NRXN1-220ENST00000611589 PELP1Q8IZL8 1130 aaKnown RBP24.25■■□□□ 1.47
NRXN1-220ENST00000611589 SMG6Q86US8 1419 aaKnown RBP24.23■■□□□ 1.47
NRXN1-220ENST00000611589 CC2D1BQ5T0F9 858 aaKnown RBP24.23■■□□□ 1.47
NRXN1-220ENST00000611589 AMER1Q5JTC6 1135 aaPredicted RBP24.21■■□□□ 1.47
NRXN1-220ENST00000611589 PUS7Q96PZ0 661 aaKnown RBP24.19■■□□□ 1.46
NRXN1-220ENST00000611589 TRAK1Q9UPV9 953 aa24.17■■□□□ 1.46
NRXN1-220ENST00000611589 ERICH6BQ5W0A0 696 aa24.17■■□□□ 1.46
NRXN1-220ENST00000611589 BLMP54132 1417 aaPredicted RBP24.16■■□□□ 1.46
NRXN1-220ENST00000611589 FBXO31Q5XUX0 539 aaPredicted RBP24.15■■□□□ 1.46
NRXN1-220ENST00000611589 USP32Q8NFA0 1604 aa24.15■■□□□ 1.46
NRXN1-220ENST00000611589 TMEM132EQ6IEE7 984 aa24.14■■□□□ 1.45
NRXN1-220ENST00000611589 NUDCQ9Y266 331 aa24.13■■□□□ 1.45
NRXN1-220ENST00000611589 A2ML1A8K2U0 1454 aa24.13■■□□□ 1.45
NRXN1-220ENST00000611589 PPP2R1AP30153 589 aa24.11■■□□□ 1.45
NRXN1-220ENST00000611589 TULP4Q9NRJ4 1543 aa24.11■■□□□ 1.45
NRXN1-220ENST00000611589 ALKQ9UM73 1620 aa24.11■■□□□ 1.45
NRXN1-220ENST00000611589 EVC2Q86UK5 1308 aa24.09■■□□□ 1.45
NRXN1-220ENST00000611589 NUTM2DQ5VT03 806 aaPredicted RBP24.09■■□□□ 1.45
NRXN1-220ENST00000611589 PTPRMP28827 1452 aa24.08■■□□□ 1.44
NRXN1-220ENST00000611589 SETD1AO15047 1707 aaKnown RBP24.07■■□□□ 1.44
NRXN1-220ENST00000611589 STAG3Q9UJ98 1225 aa24.07■■□□□ 1.44
NRXN1-220ENST00000611589 YTHDC2Q9H6S0 1430 aaKnown RBP24.06■■□□□ 1.44
NRXN1-220ENST00000611589 PDE3BQ13370 1112 aa24.06■■□□□ 1.44
NRXN1-220ENST00000611589 NINLQ9Y2I6 1382 aa24.05■■□□□ 1.44
NRXN1-220ENST00000611589 BCANQ96GW7 911 aa24.04■■□□□ 1.44
NRXN1-220ENST00000611589 CARD14Q9BXL6 1004 aa24.04■■□□□ 1.44
NRXN1-220ENST00000611589 ESF1Q9H501 851 aaKnown RBP24.04■■□□□ 1.44
NRXN1-220ENST00000611589 RIMS2Q9UQ26 1411 aa24.04■■□□□ 1.44
NRXN1-220ENST00000611589 DLC1Q96QB1 1528 aa24.04■■□□□ 1.44
NRXN1-220ENST00000611589 ZMYM3Q14202 1370 aa24.04■■□□□ 1.44
NRXN1-220ENST00000611589 MLECQ14165 292 aa24.02■■□□□ 1.44
NRXN1-220ENST00000611589 NSD3Q9BZ95 1437 aa24.01■■□□□ 1.43
NRXN1-220ENST00000611589 RNF123Q5XPI4 1314 aa24.01■■□□□ 1.43
NRXN1-220ENST00000611589 ANKRD36BQ8N2N9 1353 aa23.99■■□□□ 1.43
NRXN1-220ENST00000611589 NRXN3Q9Y4C0 1643 aa23.98■■□□□ 1.43
NRXN1-220ENST00000611589 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.98■■□□□ 1.43
NRXN1-220ENST00000611589 NSD2O96028 1365 aa23.97■■□□□ 1.43
NRXN1-220ENST00000611589 WDR43Q15061 677 aaKnown RBP eCLIP23.97■■□□□ 1.43
NRXN1-220ENST00000611589 TNRQ92752 1358 aa23.97■■□□□ 1.43
NRXN1-220ENST00000611589 UBR1Q8IWV7 1749 aa23.96■■□□□ 1.43
NRXN1-220ENST00000611589 ATAD2Q6PL18 1390 aa23.95■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms