RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 CHGAP10645 457 aaKnown RBP33.04■■■□□ 2.88
CBWD3-207ENST00000611426 MYO5BQ9ULV0 1848 aa33.03■■■□□ 2.88
CBWD3-207ENST00000611426 PPP1R15AO75807 674 aaPredicted RBP33.02■■■□□ 2.88
CBWD3-207ENST00000611426 SENP3Q9H4L4 574 aaPredicted RBP33.01■■■□□ 2.88
CBWD3-207ENST00000611426 TMEM131LA2VDJ0 1609 aa33.01■■■□□ 2.87
CBWD3-207ENST00000611426 XIRP1Q702N8 1843 aaKnown RBP33■■■□□ 2.87
CBWD3-207ENST00000611426 ZFYVE9O95405 1425 aa33■■■□□ 2.87
CBWD3-207ENST00000611426 RIMS2Q9UQ26 1411 aa33■■■□□ 2.87
CBWD3-207ENST00000611426 PROSER2Q86WR7 435 aaPredicted RBP32.97■■■□□ 2.87
CBWD3-207ENST00000611426 TMEM94Q12767 1356 aa32.96■■■□□ 2.87
CBWD3-207ENST00000611426 PLEKHG1Q9ULL1 1385 aa32.96■■■□□ 2.87
CBWD3-207ENST00000611426 RRBP1Q9P2E9 1410 aaKnown RBP32.95■■■□□ 2.87
CBWD3-207ENST00000611426 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.95■■■□□ 2.86
CBWD3-207ENST00000611426 RBM33Q96EV2 1170 aaKnown RBP32.91■■■□□ 2.86
CBWD3-207ENST00000611426 SOCS7O14512 581 aa32.9■■■□□ 2.86
CBWD3-207ENST00000611426 NUTM2DQ5VT03 806 aaPredicted RBP32.9■■■□□ 2.86
CBWD3-207ENST00000611426 NKTRP30414 1462 aaKnown RBP32.87■■■□□ 2.85
CBWD3-207ENST00000611426 NWD1Q149M9 1564 aa32.87■■■□□ 2.85
CBWD3-207ENST00000611426 MED1Q15648 1581 aaPredicted RBP32.86■■■□□ 2.85
CBWD3-207ENST00000611426 TBX22Q9Y458 520 aa32.86■■■□□ 2.85
CBWD3-207ENST00000611426 CHD2O14647 1828 aaKnown RBP32.83■■■□□ 2.85
CBWD3-207ENST00000611426 NAIPQ13075 1403 aa32.81■■■□□ 2.84
CBWD3-207ENST00000611426 FAM135BQ49AJ0 1406 aa32.81■■■□□ 2.84
CBWD3-207ENST00000611426 SPHKAPQ2M3C7 1700 aa32.8■■■□□ 2.84
CBWD3-207ENST00000611426 MSH6P52701 1360 aa32.78■■■□□ 2.84
CBWD3-207ENST00000611426 ADAMTS13Q76LX8 1427 aa32.77■■■□□ 2.84
CBWD3-207ENST00000611426 ZNF326Q5BKZ1 582 aaKnown RBP32.74■■■□□ 2.83
CBWD3-207ENST00000611426 PHF23Q9BUL5 403 aaPredicted RBP32.74■■■□□ 2.83
CBWD3-207ENST00000611426 DIP2AQ14689 1571 aa32.73■■■□□ 2.83
CBWD3-207ENST00000611426 TRIM52Q96A61 297 aa32.71■■■□□ 2.83
CBWD3-207ENST00000611426 PIK3R4Q99570 1358 aa32.71■■■□□ 2.83
CBWD3-207ENST00000611426 SLAIN2Q9P270 581 aa32.7■■■□□ 2.82
CBWD3-207ENST00000611426 ROBO1Q9Y6N7 1651 aa32.69■■■□□ 2.82
CBWD3-207ENST00000611426 HFM1A2PYH4 1435 aa32.69■■■□□ 2.82
CBWD3-207ENST00000611426 C14orf37Q86TY3 774 aa32.69■■■□□ 2.82
CBWD3-207ENST00000611426 NCOA3Q9Y6Q9 1424 aa32.66■■■□□ 2.82
CBWD3-207ENST00000611426 TRPM2O94759 1503 aa32.66■■■□□ 2.82
CBWD3-207ENST00000611426 AMOTL2Q9Y2J4 779 aa32.65■■■□□ 2.82
CBWD3-207ENST00000611426 CLTCL1P53675 1640 aa32.64■■■□□ 2.82
CBWD3-207ENST00000611426 SLC4A1APQ9BWU0 796 aaKnown RBP32.6■■■□□ 2.81
CBWD3-207ENST00000611426 C19orf44Q9H6X5 657 aa32.6■■■□□ 2.81
CBWD3-207ENST00000611426 PTPRUQ92729 1446 aa32.6■■■□□ 2.81
CBWD3-207ENST00000611426 SETBP1Q9Y6X0 1596 aa32.59■■■□□ 2.81
CBWD3-207ENST00000611426 NRXN3Q9Y4C0 1643 aa32.58■■■□□ 2.81
CBWD3-207ENST00000611426 KIF1BO60333 1816 aa32.58■■■□□ 2.81
CBWD3-207ENST00000611426 ATF3P18847 181 aa32.57■■■□□ 2.8
CBWD3-207ENST00000611426 CADPS2Q86UW7 1296 aa32.57■■■□□ 2.8
CBWD3-207ENST00000611426 NEXMIFQ5QGS0 1516 aa32.55■■■□□ 2.8
CBWD3-207ENST00000611426 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.53■■■□□ 2.8
CBWD3-207ENST00000611426 METP08581 1390 aa32.52■■■□□ 2.8
CBWD3-207ENST00000611426 PHLPP1O60346 1717 aa32.51■■■□□ 2.79
CBWD3-207ENST00000611426 VGFO15240 615 aaPredicted RBP32.47■■■□□ 2.79
CBWD3-207ENST00000611426 XRN1Q8IZH2 1706 aaKnown RBP32.47■■■□□ 2.79
CBWD3-207ENST00000611426 RGS17Q9UGC6 210 aaPredicted RBP32.45■■■□□ 2.79
CBWD3-207ENST00000611426 FOXD1Q16676 465 aa32.45■■■□□ 2.78
CBWD3-207ENST00000611426 RPGRIP1LQ68CZ1 1315 aa32.43■■■□□ 2.78
CBWD3-207ENST00000611426 JCADQ9P266 1359 aa32.43■■■□□ 2.78
CBWD3-207ENST00000611426 DCCP43146 1447 aa32.4■■■□□ 2.78
CBWD3-207ENST00000611426 COL16A1Q07092 1604 aaPredicted RBP32.38■■■□□ 2.77
CBWD3-207ENST00000611426 MPHOSPH9Q99550 1183 aa32.37■■■□□ 2.77
CBWD3-207ENST00000611426 BRINP3Q76B58 766 aa32.36■■■□□ 2.77
CBWD3-207ENST00000611426 AHDC1Q5TGY3 1603 aaPredicted RBP32.33■■■□□ 2.77
CBWD3-207ENST00000611426 CCDC144AA2RUR9 1427 aa32.32■■■□□ 2.77
CBWD3-207ENST00000611426 PPLO60437 1756 aa32.32■■■□□ 2.76
CBWD3-207ENST00000611426 MST1RQ04912 1400 aa32.31■■■□□ 2.76
CBWD3-207ENST00000611426 ADGRL3Q9HAR2 1447 aa32.31■■■□□ 2.76
CBWD3-207ENST00000611426 TRIM26Q12899 539 aaPredicted RBP32.31■■■□□ 2.76
CBWD3-207ENST00000611426 SETD1AO15047 1707 aaKnown RBP32.29■■■□□ 2.76
CBWD3-207ENST00000611426 POTEAQ6S8J7 498 aa32.29■■■□□ 2.76
CBWD3-207ENST00000611426 SPATA31A6Q5VVP1 1343 aa32.28■■■□□ 2.76
CBWD3-207ENST00000611426 RGL3Q3MIN7 710 aa32.28■■■□□ 2.76
CBWD3-207ENST00000611426 ACIN1Q9UKV3 1341 aaKnown RBP32.26■■■□□ 2.76
CBWD3-207ENST00000611426 ASXL1Q8IXJ9 1541 aa32.26■■■□□ 2.75
CBWD3-207ENST00000611426 PTCH1Q13635 1447 aa32.25■■■□□ 2.75
CBWD3-207ENST00000611426 NALCNQ8IZF0 1738 aa32.25■■■□□ 2.75
CBWD3-207ENST00000611426 ROBO2Q9HCK4 1378 aa32.24■■■□□ 2.75
CBWD3-207ENST00000611426 SETD5Q9C0A6 1442 aa32.24■■■□□ 2.75
CBWD3-207ENST00000611426 ADGRF5Q8IZF2 1346 aa32.22■■■□□ 2.75
CBWD3-207ENST00000611426 MEX3CQ5U5Q3 659 aaKnown RBP32.21■■■□□ 2.75
CBWD3-207ENST00000611426 SPATA31E1Q6ZUB1 1445 aa32.21■■■□□ 2.75
CBWD3-207ENST00000611426 SHPRHQ149N8 1683 aa32.21■■■□□ 2.75
CBWD3-207ENST00000611426 LRP6O75581 1613 aa32.19■■■□□ 2.74
CBWD3-207ENST00000611426 ANKRD30BQ9BXX2 1392 aa32.18■■■□□ 2.74
CBWD3-207ENST00000611426 PRAG1Q86YV5 1406 aa32.17■■■□□ 2.74
CBWD3-207ENST00000611426 NHSL1Q5SYE7 1610 aa32.17■■■□□ 2.74
CBWD3-207ENST00000611426 DDX17Q92841 729 aaKnown RBP32.16■■■□□ 2.74
CBWD3-207ENST00000611426 LRRC59Q96AG4 307 aaKnown RBP32.16■■■□□ 2.74
CBWD3-207ENST00000611426 C1orf167Q5SNV9 1468 aa32.15■■■□□ 2.74
CBWD3-207ENST00000611426 NUTM2BA6NNL0 878 aaPredicted RBP32.14■■■□□ 2.74
CBWD3-207ENST00000611426 NUTM2EB1AL46 878 aaPredicted RBP32.14■■■□□ 2.74
CBWD3-207ENST00000611426 NUTM2AQ8IVF1 878 aaPredicted RBP32.14■■■□□ 2.74
CBWD3-207ENST00000611426 IFT172Q9UG01 1749 aa32.12■■■□□ 2.73
CBWD3-207ENST00000611426 STK26Q9P289 416 aa32.1■■■□□ 2.73
CBWD3-207ENST00000611426 RAB3GAP2Q9H2M9 1393 aa32.1■■■□□ 2.73
CBWD3-207ENST00000611426 ZNF772Q68DY9 489 aaPredicted RBP32.09■■■□□ 2.73
CBWD3-207ENST00000611426 ORAI2Q96SN7 254 aa32.08■■■□□ 2.73
CBWD3-207ENST00000611426 PCGF6Q9BYE7 350 aa32.07■■■□□ 2.73
CBWD3-207ENST00000611426 TMEM132EQ6IEE7 984 aa32.07■■■□□ 2.72
CBWD3-207ENST00000611426 PIK3C2GO75747 1445 aa32.04■■■□□ 2.72
CBWD3-207ENST00000611426 LRPPRCP42704 1394 aaKnown RBP32.04■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms