RNA–Protein interactions for RNA: ENST00000610543.4

CNTFR-204, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNTFR, Length 1,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-204ENST00000610543 NLRP13Q86W25 1043 aa20.62■□□□□ 0.89
CNTFR-204ENST00000610543 LRPPRCP42704 1394 aaKnown RBP20.62■□□□□ 0.89
CNTFR-204ENST00000610543 MROH2AA6NES4 1674 aa20.61■□□□□ 0.89
CNTFR-204ENST00000610543 SYNMO15061 1565 aa20.6■□□□□ 0.89
CNTFR-204ENST00000610543 SMG6Q86US8 1419 aaKnown RBP20.6■□□□□ 0.89
CNTFR-204ENST00000610543 PER1O15534 1290 aaPredicted RBP20.6■□□□□ 0.89
CNTFR-204ENST00000610543 ADGRB3O60242 1522 aa20.59■□□□□ 0.89
CNTFR-204ENST00000610543 SLC24A1O60721 1099 aa20.57■□□□□ 0.88
CNTFR-204ENST00000610543 PANK3Q9H999 370 aa20.56■□□□□ 0.88
CNTFR-204ENST00000610543 NPATQ14207 1427 aa20.56■□□□□ 0.88
CNTFR-204ENST00000610543 ABCC3O15438 1527 aa20.56■□□□□ 0.88
CNTFR-204ENST00000610543 NRXN1Q9ULB1 1477 aa20.55■□□□□ 0.88
CNTFR-204ENST00000610543 DIP2CQ9Y2E4 1556 aa20.55■□□□□ 0.88
CNTFR-204ENST00000610543 CAMSAP1Q5T5Y3 1602 aa20.55■□□□□ 0.88
CNTFR-204ENST00000610543 RICTORQ6R327 1708 aa20.55■□□□□ 0.88
CNTFR-204ENST00000610543 TSHZ2Q9NRE2 1034 aa20.55■□□□□ 0.88
CNTFR-204ENST00000610543 KIF13AQ9H1H9 1805 aa20.55■□□□□ 0.88
CNTFR-204ENST00000610543 KDM5AP29375 1690 aaKnown RBP20.54■□□□□ 0.88
CNTFR-204ENST00000610543 NUDCQ9Y266 331 aa20.54■□□□□ 0.88
CNTFR-204ENST00000610543 ZC3H13Q5T200 1668 aaKnown RBP20.53■□□□□ 0.88
CNTFR-204ENST00000610543 ZMYM4Q5VZL5 1548 aa20.53■□□□□ 0.88
CNTFR-204ENST00000610543 GGT6Q6P531 493 aa20.53■□□□□ 0.88
CNTFR-204ENST00000610543 GLI2P10070 1586 aa20.52■□□□□ 0.88
CNTFR-204ENST00000610543 SETBP1Q9Y6X0 1596 aa20.51■□□□□ 0.87
CNTFR-204ENST00000610543 INSRP06213 1382 aa20.51■□□□□ 0.87
CNTFR-204ENST00000610543 MYO3AQ8NEV4 1616 aa20.51■□□□□ 0.87
CNTFR-204ENST00000610543 IRX6P78412 446 aaPredicted RBP20.51■□□□□ 0.87
CNTFR-204ENST00000610543 PPLO60437 1756 aa20.51■□□□□ 0.87
CNTFR-204ENST00000610543 MYOM1P52179 1685 aa20.5■□□□□ 0.87
CNTFR-204ENST00000610543 FAM69CQ0P6D2 419 aa20.5■□□□□ 0.87
CNTFR-204ENST00000610543 CC2D1BQ5T0F9 858 aaKnown RBP20.5■□□□□ 0.87
CNTFR-204ENST00000610543 ADGRF5Q8IZF2 1346 aa20.49■□□□□ 0.87
CNTFR-204ENST00000610543 NOS1P29475 1434 aa20.48■□□□□ 0.87
CNTFR-204ENST00000610543 PPP4R2Q9NY27 417 aa20.48■□□□□ 0.87
CNTFR-204ENST00000610543 KNSTRNQ9Y448 316 aa20.48■□□□□ 0.87
CNTFR-204ENST00000610543 RAPGEF3O95398 923 aa20.47■□□□□ 0.87
CNTFR-204ENST00000610543 CFAP70Q5T0N1 1121 aa20.47■□□□□ 0.87
CNTFR-204ENST00000610543 DIP2BQ9P265 1576 aa20.47■□□□□ 0.87
CNTFR-204ENST00000610543 RPGRIP1LQ68CZ1 1315 aa20.46■□□□□ 0.87
CNTFR-204ENST00000610543 ASXL1Q8IXJ9 1541 aa20.46■□□□□ 0.87
CNTFR-204ENST00000610543 CHGAP10645 457 aaKnown RBP20.45■□□□□ 0.86
CNTFR-204ENST00000610543 SBNO2Q9Y2G9 1366 aa20.45■□□□□ 0.86
CNTFR-204ENST00000610543 PIK3C2BO00750 1634 aa20.45■□□□□ 0.86
CNTFR-204ENST00000610543 PIK3C2GO75747 1445 aa20.45■□□□□ 0.86
CNTFR-204ENST00000610543 ARHGAP31Q2M1Z3 1444 aa20.44■□□□□ 0.86
CNTFR-204ENST00000610543 CFAP65Q6ZU64 1925 aaKnown RBP20.43■□□□□ 0.86
CNTFR-204ENST00000610543 ERVK-7P63135 1459 aa20.43■□□□□ 0.86
CNTFR-204ENST00000610543 SIGLEC1Q9BZZ2 1709 aa20.42■□□□□ 0.86
CNTFR-204ENST00000610543 BLMP54132 1417 aaPredicted RBP20.42■□□□□ 0.86
CNTFR-204ENST00000610543 NPC1L1Q9UHC9 1359 aa20.42■□□□□ 0.86
CNTFR-204ENST00000610543 PDE3BQ13370 1112 aa20.4■□□□□ 0.86
CNTFR-204ENST00000610543 RNF123Q5XPI4 1314 aa20.4■□□□□ 0.86
CNTFR-204ENST00000610543 AMER1Q5JTC6 1135 aaPredicted RBP20.38■□□□□ 0.85
CNTFR-204ENST00000610543 YEATS2Q9ULM3 1422 aa20.38■□□□□ 0.85
CNTFR-204ENST00000610543 CENPJQ9HC77 1338 aaPredicted RBP20.37■□□□□ 0.85
CNTFR-204ENST00000610543 ADGRB1O14514 1584 aa20.37■□□□□ 0.85
CNTFR-204ENST00000610543 QRICH2Q9H0J4 1663 aa20.37■□□□□ 0.85
CNTFR-204ENST00000610543 C14orf93Q9H972 538 aaKnown RBP20.36■□□□□ 0.85
CNTFR-204ENST00000610543 NEXMIFQ5QGS0 1516 aa20.36■□□□□ 0.85
CNTFR-204ENST00000610543 PPP2R1AP30153 589 aa20.34■□□□□ 0.85
CNTFR-204ENST00000610543 AEBP2Q6ZN18 517 aaPredicted RBP20.34■□□□□ 0.85
CNTFR-204ENST00000610543 PREX1Q8TCU6 1659 aa20.33■□□□□ 0.85
CNTFR-204ENST00000610543 VGFO15240 615 aaPredicted RBP20.33■□□□□ 0.84
CNTFR-204ENST00000610543 SENP3-EIF4A1A0A087X0R7 540 aa20.31■□□□□ 0.84
CNTFR-204ENST00000610543 WDR43Q15061 677 aaKnown RBP eCLIP20.31■□□□□ 0.84
CNTFR-204ENST00000610543 SLC52A1Q9NWF4 448 aa20.31■□□□□ 0.84
CNTFR-204ENST00000610543 REREQ9P2R6 1566 aa20.31■□□□□ 0.84
CNTFR-204ENST00000610543 TRAK1Q9UPV9 953 aa20.29■□□□□ 0.84
CNTFR-204ENST00000610543 ZFYVE9O95405 1425 aa20.29■□□□□ 0.84
CNTFR-204ENST00000610543 ARHGEF28Q8N1W1 1705 aaKnown RBP20.28■□□□□ 0.84
CNTFR-204ENST00000610543 B4GALNT3Q6L9W6 998 aa20.27■□□□□ 0.84
CNTFR-204ENST00000610543 SALL2Q9Y467 1007 aaPredicted RBP20.27■□□□□ 0.84
CNTFR-204ENST00000610543 TSPOAP1O95153 1857 aa20.26■□□□□ 0.83
CNTFR-204ENST00000610543 RCAN3Q9UKA8 241 aa20.25■□□□□ 0.83
CNTFR-204ENST00000610543 TMEM131LA2VDJ0 1609 aa20.25■□□□□ 0.83
CNTFR-204ENST00000610543 AGLP35573 1532 aa20.25■□□□□ 0.83
CNTFR-204ENST00000610543 IDI1Q13907 227 aa20.24■□□□□ 0.83
CNTFR-204ENST00000610543 ADAMTS8Q9UP79 889 aa20.24■□□□□ 0.83
CNTFR-204ENST00000610543 RBM19Q9Y4C8 960 aaKnown RBP20.24■□□□□ 0.83
CNTFR-204ENST00000610543 RRP1P56182 461 aaKnown RBP20.23■□□□□ 0.83
CNTFR-204ENST00000610543 USP32Q8NFA0 1604 aa20.23■□□□□ 0.83
CNTFR-204ENST00000610543 MYO5BQ9ULV0 1848 aa20.23■□□□□ 0.83
CNTFR-204ENST00000610543 TMEM132EQ6IEE7 984 aa20.22■□□□□ 0.83
CNTFR-204ENST00000610543 PUS7Q96PZ0 661 aaKnown RBP20.21■□□□□ 0.83
CNTFR-204ENST00000610543 PPP6R1Q9UPN7 881 aa20.21■□□□□ 0.83
CNTFR-204ENST00000610543 CCDC136Q96JN2 1154 aa20.2■□□□□ 0.82
CNTFR-204ENST00000610543 CARD14Q9BXL6 1004 aa20.2■□□□□ 0.82
CNTFR-204ENST00000610543 EVC2Q86UK5 1308 aa20.2■□□□□ 0.82
CNTFR-204ENST00000610543 NSD3Q9BZ95 1437 aa20.2■□□□□ 0.82
CNTFR-204ENST00000610543 NUTM2DQ5VT03 806 aaPredicted RBP20.17■□□□□ 0.82
CNTFR-204ENST00000610543 CDCA7LQ96GN5 454 aa20.17■□□□□ 0.82
CNTFR-204ENST00000610543 TULP4Q9NRJ4 1543 aa20.17■□□□□ 0.82
CNTFR-204ENST00000610543 CLTCQ00610 1675 aaKnown RBP20.16■□□□□ 0.82
CNTFR-204ENST00000610543 ARHGEF40Q8TER5 1519 aa20.15■□□□□ 0.82
CNTFR-204ENST00000610543 POLR3AO14802 1390 aaPredicted RBP20.14■□□□□ 0.82
CNTFR-204ENST00000610543 NINLQ9Y2I6 1382 aa20.13■□□□□ 0.81
CNTFR-204ENST00000610543 ANKRD36BQ8N2N9 1353 aa20.13■□□□□ 0.81
CNTFR-204ENST00000610543 SPATA31D1Q6ZQQ2 1576 aa20.12■□□□□ 0.81
CNTFR-204ENST00000610543 NGEFQ8N5V2 710 aa20.12■□□□□ 0.81
CNTFR-204ENST00000610543 SLC12A5Q9H2X9 1139 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms