RNA–Protein interactions for RNA: ENST00000610493.1

CCL16-204, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 5

Gene CCL16, Length 1,634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-204ENST00000610493 NCAPD3P42695 1498 aa12.77□□□□□ -0.37
CCL16-204ENST00000610493 AMHR2Q16671 573 aa12.77□□□□□ -0.37
CCL16-204ENST00000610493 RBM46Q8TBY0 533 aaKnown RBP12.77□□□□□ -0.37
CCL16-204ENST00000610493 PXYLP1Q8TE99 480 aa12.77□□□□□ -0.37
CCL16-204ENST00000610493 KIAA1468Q9P260 1216 aa12.77□□□□□ -0.37
CCL16-204ENST00000610493 RUSC2Q8N2Y8 1516 aa12.77□□□□□ -0.37
CCL16-204ENST00000610493 NBPF26B4DH59 902 aa12.75□□□□□ -0.37
CCL16-204ENST00000610493 MDM2Q00987 491 aaPredicted RBP12.75□□□□□ -0.37
CCL16-204ENST00000610493 PARP9Q8IXQ6 854 aa12.75□□□□□ -0.37
CCL16-204ENST00000610493 KDM4CQ9H3R0 1056 aa12.75□□□□□ -0.37
CCL16-204ENST00000610493 CEP164Q9UPV0 1460 aa12.74□□□□□ -0.37
CCL16-204ENST00000610493 TATDN2Q93075 761 aa12.74□□□□□ -0.37
CCL16-204ENST00000610493 HMGXB3Q12766 1538 aa12.74□□□□□ -0.37
CCL16-204ENST00000610493 SYNJ1O43426 1573 aa12.74□□□□□ -0.37
CCL16-204ENST00000610493 KIF21BO75037 1637 aa12.72□□□□□ -0.37
CCL16-204ENST00000610493 SEPT9Q9UHD8 586 aaPredicted RBP12.72□□□□□ -0.37
CCL16-204ENST00000610493 EYA1Q99502 592 aa12.71□□□□□ -0.37
CCL16-204ENST00000610493 REPIN1Q9BWE0 567 aaKnown RBP12.71□□□□□ -0.37
CCL16-204ENST00000610493 VPS9D1Q9Y2B5 631 aa12.71□□□□□ -0.37
CCL16-204ENST00000610493 RCCD1A6NED2 376 aa12.7□□□□□ -0.38
CCL16-204ENST00000610493 ONECUT3O60422 494 aaPredicted RBP12.7□□□□□ -0.38
CCL16-204ENST00000610493 UBTFP17480 764 aaKnown RBP12.7□□□□□ -0.38
CCL16-204ENST00000610493 RABGEF1Q9UJ41 708 aa12.7□□□□□ -0.38
CCL16-204ENST00000610493 CLCN1P35523 988 aa12.69□□□□□ -0.38
CCL16-204ENST00000610493 LSM11P83369 360 aaKnown RBP eCLIP12.69□□□□□ -0.38
CCL16-204ENST00000610493 GIGYF2Q6Y7W6 1299 aaKnown RBP12.69□□□□□ -0.38
CCL16-204ENST00000610493 SLC4A5Q9BY07 1137 aa12.69□□□□□ -0.38
CCL16-204ENST00000610493 ANKRD13DQ6ZTN6 518 aa12.68□□□□□ -0.38
CCL16-204ENST00000610493 GPCPD1Q9NPB8 672 aa12.68□□□□□ -0.38
CCL16-204ENST00000610493 TOP2BQ02880 1626 aa12.67□□□□□ -0.38
CCL16-204ENST00000610493 IL27Q8NEV9 243 aa12.66□□□□□ -0.38
CCL16-204ENST00000610493 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.66□□□□□ -0.38
CCL16-204ENST00000610493 ADGRD1Q6QNK2 874 aa12.65□□□□□ -0.38
CCL16-204ENST00000610493 DNAJB2P25686 324 aa12.64□□□□□ -0.39
CCL16-204ENST00000610493 FAM117AQ9C073 453 aa12.64□□□□□ -0.39
CCL16-204ENST00000610493 BIVM-ERCC5R4GMW8 1640 aa12.63□□□□□ -0.39
CCL16-204ENST00000610493 POTEGQ6S5H5 508 aa12.63□□□□□ -0.39
CCL16-204ENST00000610493 TK2O00142 265 aa12.62□□□□□ -0.39
CCL16-204ENST00000610493 MS4A1P11836 297 aa12.62□□□□□ -0.39
CCL16-204ENST00000610493 TMUB1Q9BVT8 246 aa12.62□□□□□ -0.39
CCL16-204ENST00000610493 NBPF3Q9H094 633 aa12.62□□□□□ -0.39
CCL16-204ENST00000610493 POTEMA6NI47 508 aa12.61□□□□□ -0.39
CCL16-204ENST00000610493 SSTR3P32745 418 aaPredicted RBP12.61□□□□□ -0.39
CCL16-204ENST00000610493 CFTRP13569 1480 aa12.61□□□□□ -0.39
CCL16-204ENST00000610493 TMEM134Q9H6X4 195 aa12.6□□□□□ -0.39
CCL16-204ENST00000610493 CLIP1P30622 1438 aa12.59□□□□□ -0.39
CCL16-204ENST00000610493 FAM98CQ17RN3 349 aaKnown RBP12.59□□□□□ -0.39
CCL16-204ENST00000610493 TMEM132AQ24JP5 1023 aa12.59□□□□□ -0.39
CCL16-204ENST00000610493 FAM217BQ9NTX9 383 aaPredicted RBP12.59□□□□□ -0.39
CCL16-204ENST00000610493 DAXXQ9UER7 740 aaPredicted RBP12.59□□□□□ -0.39
CCL16-204ENST00000610493 MRPL50Q8N5N7 158 aaKnown RBP12.59□□□□□ -0.39
CCL16-204ENST00000610493 KRTAP3-3Q9BYR6 98 aa12.59□□□□□ -0.39
CCL16-204ENST00000610493 KRTAP3-2Q9BYR7 98 aa12.59□□□□□ -0.39
CCL16-204ENST00000610493 DDX11L8A8MPP1 907 aa12.58□□□□□ -0.4
CCL16-204ENST00000610493 BHMG1C9JSJ3 638 aaPredicted RBP12.58□□□□□ -0.4
CCL16-204ENST00000610493 STAC3Q96MF2 364 aa12.58□□□□□ -0.4
CCL16-204ENST00000610493 PRXQ9BXM0 1461 aa12.57□□□□□ -0.4
CCL16-204ENST00000610493 VPS8Q8N3P4 1428 aa12.57□□□□□ -0.4
CCL16-204ENST00000610493 SWT1Q5T5J6 900 aaKnown RBP12.57□□□□□ -0.4
CCL16-204ENST00000610493 ERICH3Q5RHP9 1530 aa12.57□□□□□ -0.4
CCL16-204ENST00000610493 RAPGEF2Q9Y4G8 1499 aa12.57□□□□□ -0.4
CCL16-204ENST00000610493 CCER1Q8TC90 406 aaPredicted RBP12.56□□□□□ -0.4
CCL16-204ENST00000610493 CDAN1Q8IWY9 1227 aa12.55□□□□□ -0.4
CCL16-204ENST00000610493 DDRGK1Q96HY6 314 aa12.55□□□□□ -0.4
CCL16-204ENST00000610493 HRO43593 1189 aa12.55□□□□□ -0.4
CCL16-204ENST00000610493 RNF40O75150 1001 aa12.55□□□□□ -0.4
CCL16-204ENST00000610493 HDGFP51858 240 aaKnown RBP12.55□□□□□ -0.4
CCL16-204ENST00000610493 BEGAINQ9BUH8 593 aa12.55□□□□□ -0.4
CCL16-204ENST00000610493 PLEKHG3A1L390 1219 aa12.54□□□□□ -0.4
CCL16-204ENST00000610493 SAMD7Q7Z3H4 446 aa12.54□□□□□ -0.4
CCL16-204ENST00000610493 LAPTM4BQ86VI4 370 aa12.54□□□□□ -0.4
CCL16-204ENST00000610493 ZFRQ96KR1 1074 aaKnown RBP12.54□□□□□ -0.4
CCL16-204ENST00000610493 RDH13Q8NBN7 331 aa12.53□□□□□ -0.4
CCL16-204ENST00000610493 CUX1P39880 1505 aa12.52□□□□□ -0.4
CCL16-204ENST00000610493 SULF1Q8IWU6 871 aa12.52□□□□□ -0.4
CCL16-204ENST00000610493 GOLGA8CPA6NN73 597 aa12.51□□□□□ -0.41
CCL16-204ENST00000610493 KIF27Q86VH2 1401 aa12.51□□□□□ -0.41
CCL16-204ENST00000610493 CD46P15529 392 aa12.48□□□□□ -0.41
CCL16-204ENST00000610493 SLC4A3P48751 1232 aa12.48□□□□□ -0.41
CCL16-204ENST00000610493 CADPSQ9ULU8 1353 aa12.47□□□□□ -0.41
CCL16-204ENST00000610493 LRCH3Q96II8 777 aa12.46□□□□□ -0.41
CCL16-204ENST00000610493 SLC10A3P09131 477 aa12.45□□□□□ -0.42
CCL16-204ENST00000610493 SLF2Q8IX21 1173 aa12.45□□□□□ -0.42
CCL16-204ENST00000610493 ANKK1Q8NFD2 765 aa12.45□□□□□ -0.42
CCL16-204ENST00000610493 RSPH4AQ5TD94 716 aa12.44□□□□□ -0.42
CCL16-204ENST00000610493 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.44□□□□□ -0.42
CCL16-204ENST00000610493 WNT2BQ93097 391 aa12.43□□□□□ -0.42
CCL16-204ENST00000610493 ATP1B4Q9UN42 357 aaPredicted RBP12.43□□□□□ -0.42
CCL16-204ENST00000610493 BCAMP50895 628 aa12.42□□□□□ -0.42
CCL16-204ENST00000610493 NUTM1Q86Y26 1132 aa12.42□□□□□ -0.42
CCL16-204ENST00000610493 TBC1D2Q9BYX2 928 aa12.42□□□□□ -0.42
CCL16-204ENST00000610493 ARAP1Q96P48 1450 aa12.4□□□□□ -0.42
CCL16-204ENST00000610493 POLR3EQ9NVU0 708 aa12.4□□□□□ -0.42
CCL16-204ENST00000610493 PRDM2Q13029 1718 aa12.4□□□□□ -0.42
CCL16-204ENST00000610493 TTBK1Q5TCY1 1321 aaPredicted RBP12.4□□□□□ -0.42
CCL16-204ENST00000610493 SPIRE2Q8WWL2 714 aa12.4□□□□□ -0.42
CCL16-204ENST00000610493 CFHP08603 1231 aa12.39□□□□□ -0.43
CCL16-204ENST00000610493 RSPH6AQ9H0K4 717 aa12.39□□□□□ -0.43
CCL16-204ENST00000610493 IGF1RP08069 1367 aa12.38□□□□□ -0.43
CCL16-204ENST00000610493 SOWAHBA6NEL2 793 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms